ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl27c09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY111316.1| Zea mays CL12529_1 mRNA sequence 56 7e-05
2ref|NM_185137.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.017
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 48 0.017
4emb|AL353582.16| Human DNA sequence from clone CTD-2190D5 on chr... 48 0.017
5emb|AL138751.18| Human DNA sequence from clone RP11-346E17 on ch... 48 0.017
6gb|AC091956.3| Homo sapiens chromosome 5 clone RP11-430F16, comp... 48 0.017
7gb|AC091247.4| Oryza sativa chromosome 3 BAC OJ1111_B11 genomic ... 48 0.017
8dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.017
9gb|AC139497.3| Homo sapiens chromosome 5 clone RP11-855C21, comp... 48 0.017
10dbj|AK104830.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.017
11dbj|AK067902.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.017
12emb|AL358434.16| Human DNA sequence from clone RP11-471P6 on chr... 46 0.069
13gb|AC121499.9| Mus musculus chromosome 9, clone RP23-269E5, comp... 42 1.1
14gb|AC119218.7| Mus musculus chromosome 7, clone RP24-200I20, com... 42 1.1
15gb|AC162304.4| Mus musculus chromosome 7, clone RP23-350J16, com... 42 1.1
16gb|AC114788.4| Homo sapiens BAC clone RP11-648F7 from 2, complet... 42 1.1
17gb|AC022404.7|AC022404 Homo sapiens chromosome 14 clone CTD-2308... 42 1.1
18gb|AC009226.3| Homo sapiens BAC clone RP11-167C7 from 2, complet... 42 1.1
19dbj|AP003467.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 42 1.1
20dbj|AP003551.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 42 1.1
21gb|AY456060.1| Botryotinia fuckeliana putative histidine kinase ... 40 4.2
22gb|AF461899.1| Homo sapiens FP6628 mRNA, complete cds 40 4.2
23gb|AC141112.7| Medicago truncatula clone mth2-15m12, complete se... 40 4.2
24emb|AL591901.12| Human DNA sequence from clone RP11-400C4 on chr... 40 4.2
25emb|AL450487.17| Human DNA sequence from clone RP11-314A15 on ch... 40 4.2
26emb|AL359914.14| Human DNA sequence from clone RP11-637B23 on ch... 40 4.2
27emb|AL390739.8| Human DNA sequence from clone RP11-157F14 on chr... 40 4.2
28emb|AL353710.7| Human DNA sequence from clone RP11-470P4 on chro... 40 4.2
29emb|AL096677.21|HSJ322G13 Human DNA sequence from clone RP3-322G... 40 4.2
30emb|AL049641.11|HSDA22P16 Human DNA sequence from clone RP6-22P1... 40 4.2
31emb|AL035665.32|HS644L1 Human DNA sequence from clone RP4-644L1 ... 40 4.2
32emb|AL009181.1|HS212P9 Human DNA sequence from clone RP1-212P9 o... 40 4.2
33gb|AC007998.10| Homo sapiens chromosome 18, clone RP11-322E11, c... 40 4.2
34emb|AL109946.12|HSJ820B18 Human DNA sequence from clone RP5-820B... 40 4.2
35gb|AC120053.4| Homo sapiens chromosome 8, clone CTD-2006H14, com... 40 4.2
36gb|AC010834.19| Homo sapiens chromosome 8, clone RP11-10N23, com... 40 4.2
37gb|AC069222.23| Homo sapiens 3 BAC RP11-383I23 (Roswell Park Can... 40 4.2
38dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.2
39dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.2
40gb|AC008281.3| Homo sapiens BAC clone RP11-481E6 from 2, complet... 40 4.2
41dbj|AP003330.4| Oryza sativa (japonica cultivar-group) genomic D... 40 4.2
42gb|AC004826.3|AC004826 Homo sapiens PAC clone RP1-309D19 from 5,... 40 4.2
43gb|AC010087.3| Homo sapiens BAC clone RP11-241M13 from 2, comple... 40 4.2
44gb|AC113382.2| Homo sapiens chromosome 5 clone RP11-325L7, compl... 40 4.2
45dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 4.2
46dbj|AP003022.2| Oryza sativa (japonica cultivar-group) genomic D... 40 4.2
47gb|CP000029.1| Staphylococcus epidermidis RP62A, complete genome 40 4.2
48dbj|AK099765.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.2
49gb|AY530950.1| Zea mays putative zinc finger protein (Z438D03.1)... 40 4.2
50emb|AL132778.6|CNS01DTJ Human chromosome 14 DNA sequence BAC C-2... 40 4.2
51dbj|AP000486.6| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 4.2
52gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 4.2
53emb|AL731763.1|CNS07YQA Oryza sativa chromosome 12, . BAC OSJNBa... 40 4.2
54emb|AL122057.4|CNS01DSZ Human chromosome 14 DNA sequence BAC R-2... 40 4.2 
>gb|AY111316.1| Zea mays CL12529_1 mRNA sequence
          Length = 1152

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                   
Query: 269 ttccgcgaaaacgatggcaacggtgcaccttcttggggcc 308
           ||||| ||||||||||||| ||| ||||||||||||||||
Sbjct: 369 ttccgtgaaaacgatggcagcggcgcaccttcttggggcc 408
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>ref|NM_185137.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2834

 Score = 48.1 bits (24), Expect = 0.017
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                        
Query: 275  gaaaacgatggcaacggtgcaccttcttggggccgtaggatgac 318
            ||||| ||||||||||| || |||||||| ||||| ||||||||
Sbjct: 2540 gaaaatgatggcaacggagcgccttcttgtggccgcaggatgac 2497
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 48.1 bits (24), Expect = 0.017
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                            
Query: 275      gaaaacgatggcaacggtgcaccttcttggggccgtaggatgac 318
                ||||| ||||||||||| || |||||||| ||||| ||||||||
Sbjct: 34383674 gaaaatgatggcaacggagcgccttcttgtggccgcaggatgac 34383631
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>emb|AL353582.16| Human DNA sequence from clone CTD-2190D5 on chromosome 20 Contains
             ESTs, STSs and GSSs, complete sequence
          Length = 115551

 Score = 48.1 bits (24), Expect = 0.017
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 55    tcaaaactcaactgtatttctata 78
             ||||||||||||||||||||||||
Sbjct: 81214 tcaaaactcaactgtatttctata 81237
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>emb|AL138751.18| Human DNA sequence from clone RP11-346E17 on chromosome 9 Contains the
             5' end of a novel gene (CGI-67), a novel gene, a novel
             gene (LOC138240) and a CpG island, complete sequence
          Length = 195844

 Score = 48.1 bits (24), Expect = 0.017
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 56    caaaactcaactgtatttctatac 79
             ||||||||||||||||||||||||
Sbjct: 99133 caaaactcaactgtatttctatac 99110
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>gb|AC091956.3| Homo sapiens chromosome 5 clone RP11-430F16, complete sequence
          Length = 209754

 Score = 48.1 bits (24), Expect = 0.017
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 56    caaaactcaactgtatttctatac 79
             ||||||||||||||||||||||||
Sbjct: 72435 caaaactcaactgtatttctatac 72412
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>gb|AC091247.4| Oryza sativa chromosome 3 BAC OJ1111_B11 genomic sequence, complete
             sequence
          Length = 115393

 Score = 48.1 bits (24), Expect = 0.017
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                         
Query: 275   gaaaacgatggcaacggtgcaccttcttggggccgtaggatgac 318
             ||||| ||||||||||| || |||||||| ||||| ||||||||
Sbjct: 66020 gaaaatgatggcaacggagcgccttcttgtggccgcaggatgac 66063
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 48.1 bits (24), Expect = 0.017
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                            
Query: 275      gaaaacgatggcaacggtgcaccttcttggggccgtaggatgac 318
                ||||| ||||||||||| || |||||||| ||||| ||||||||
Sbjct: 34474146 gaaaatgatggcaacggagcgccttcttgtggccgcaggatgac 34474103
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>gb|AC139497.3| Homo sapiens chromosome 5 clone RP11-855C21, complete sequence
          Length = 199004

 Score = 48.1 bits (24), Expect = 0.017
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 56     caaaactcaactgtatttctatac 79
              ||||||||||||||||||||||||
Sbjct: 126557 caaaactcaactgtatttctatac 126580
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>dbj|AK104830.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-A01, full
           insert sequence
          Length = 880

 Score = 48.1 bits (24), Expect = 0.017
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 275 gaaaacgatggcaacggtgcaccttcttggggccgtaggatgac 318
           ||||| ||||||||||| || |||||||| ||||| ||||||||
Sbjct: 563 gaaaatgatggcaacggagcgccttcttgtggccgcaggatgac 520
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>dbj|AK067902.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013121O19, full
            insert sequence
          Length = 3031

 Score = 48.1 bits (24), Expect = 0.017
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                        
Query: 275  gaaaacgatggcaacggtgcaccttcttggggccgtaggatgac 318
            ||||| ||||||||||| || |||||||| ||||| ||||||||
Sbjct: 2687 gaaaatgatggcaacggagcgccttcttgtggccgcaggatgac 2644
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>emb|AL358434.16| Human DNA sequence from clone RP11-471P6 on chromosome 1 Contains the 5'
              end of the XPR1 gene for xenotropic and polytropic
              retrovirus receptor, complete sequence
          Length = 178375

 Score = 46.1 bits (23), Expect = 0.069
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 56     caaaactcaactgtatttctata 78
              |||||||||||||||||||||||
Sbjct: 153626 caaaactcaactgtatttctata 153604
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>gb|AC121499.9| Mus musculus chromosome 9, clone RP23-269E5, complete sequence
          Length = 212061

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 40     tcaaaatattcttcctcaaaa 60
              |||||||||||||||||||||
Sbjct: 109649 tcaaaatattcttcctcaaaa 109629
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>gb|AC119218.7| Mus musculus chromosome 7, clone RP24-200I20, complete sequence
          Length = 171061

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 40     tcaaaatattcttcctcaaaa 60
              |||||||||||||||||||||
Sbjct: 138552 tcaaaatattcttcctcaaaa 138572
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>gb|AC162304.4| Mus musculus chromosome 7, clone RP23-350J16, complete sequence
          Length = 219899

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 40   tcaaaatattcttcctcaaaa 60
            |||||||||||||||||||||
Sbjct: 1507 tcaaaatattcttcctcaaaa 1527
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>gb|AC114788.4| Homo sapiens BAC clone RP11-648F7 from 2, complete sequence
          Length = 116951

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 55    tcaaaactcaactgtatttctatac 79
             ||||||||||| |||||||||||||
Sbjct: 35876 tcaaaactcaattgtatttctatac 35852
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>gb|AC022404.7|AC022404 Homo sapiens chromosome 14 clone CTD-2308C24 and RP11-757H14 map 14q31,
              complete sequence
          Length = 232309

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 42     aaaatattcttcctcaaaact 62
              |||||||||||||||||||||
Sbjct: 138923 aaaatattcttcctcaaaact 138903
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>gb|AC009226.3| Homo sapiens BAC clone RP11-167C7 from 2, complete sequence
          Length = 138778

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 55    tcaaaactcaactgtatttctatac 79
             |||||| ||||||||||||||||||
Sbjct: 14323 tcaaaaatcaactgtatttctatac 14347
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>dbj|AP003467.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1205A7
          Length = 150708

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 46    tattcttcctcaaaactcaactgta 70
             ||||||||| |||||||||||||||
Sbjct: 90542 tattcttccacaaaactcaactgta 90518
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>dbj|AP003551.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1967D12, complete
            sequence
          Length = 160952

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 46   tattcttcctcaaaactcaactgta 70
            ||||||||| |||||||||||||||
Sbjct: 8942 tattcttccacaaaactcaactgta 8918
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>gb|AY456060.1| Botryotinia fuckeliana putative histidine kinase M3C8p (M3C8) gene,
            complete cds
          Length = 7974

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 137  aggatttctcatctcatggg 156
            ||||||||||||||||||||
Sbjct: 5705 aggatttctcatctcatggg 5724
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>gb|AF461899.1| Homo sapiens FP6628 mRNA, complete cds
          Length = 3102

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 56   caaaactcaactgtatttctatac 79
            ||||| ||||||||||||||||||
Sbjct: 1838 caaaaatcaactgtatttctatac 1861
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>gb|AC141112.7| Medicago truncatula clone mth2-15m12, complete sequence
          Length = 135248

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 70    atttctatactgtaaaactatatc 93
             ||||||||| ||||||||||||||
Sbjct: 57869 atttctataatgtaaaactatatc 57892
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>emb|AL591901.12| Human DNA sequence from clone RP11-400C4 on chromosome 1, complete
             sequence
          Length = 129844

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 189   tgtgcagaggccctgtcatg 208
             ||||||||||||||||||||
Sbjct: 81163 tgtgcagaggccctgtcatg 81182
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>emb|AL450487.17| Human DNA sequence from clone RP11-314A15 on chromosome Xq12-13.3
             Contains a eukaryotic translation termination factor 1
             (ETF1) pseudogene, a cyclin fold protein 1 (CFP1)
             pseudogene and a CpG island, complete sequence
          Length = 159093

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 139   gatttctcatctcatggggcaggt 162
             |||||||| |||||||||||||||
Sbjct: 47046 gatttctcttctcatggggcaggt 47023
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>emb|AL359914.14| Human DNA sequence from clone RP11-637B23 on chromosome X Contains a H3
             histone, family 3B (H3F3B) pseudogene, the BMP15 gene for
             bone morphogenetic protein 15, and a high-mobility group
             box 1 (HMGB1) pseudogene, complete sequence
          Length = 125495

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 56    caaaactcaactgtatttctatac 79
             ||||||||||||| ||||||||||
Sbjct: 74522 caaaactcaactgaatttctatac 74545
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>emb|AL390739.8| Human DNA sequence from clone RP11-157F14 on chromosome 13 Contains two
             CpG islands, complete sequence
          Length = 123887

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 55    tcaaaactcaactgtatttctata 78
             |||||| |||||||||||||||||
Sbjct: 50834 tcaaaagtcaactgtatttctata 50811
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>emb|AL353710.7| Human DNA sequence from clone RP11-470P4 on chromosome 9 Contains a novel
              gene, the 5' end of the CHAC gene for chorea acanthocytosis
              and a CpG island, complete sequence
          Length = 110633

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 56     caaaactcaactgtatttctatac 79
              |||||||||| |||||||||||||
Sbjct: 109107 caaaactcaattgtatttctatac 109084
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>emb|AL096677.21|HSJ322G13 Human DNA sequence from clone RP3-322G13 on chromosome 20p11.21-12.3
             Contains the gene for NTF2-related export protein (NXT1),
             the ZNF336 gene for zinc finger protein 336, two putative
             novel genes, the NAPB gene for N-ethylmaleimide-sensitive
             factor attachment protein beta, the CSTL1 gene for
             cystatin-like 1, the CST11 gene for cystatin 11 and six
             CpG islands, complete sequence
          Length = 112180

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 56    caaaactcaactgtatttctatac 79
             ||||| ||||||||||||||||||
Sbjct: 42775 caaaattcaactgtatttctatac 42798
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>emb|AL049641.11|HSDA22P16 Human DNA sequence from clone RP6-22P16 on chromosome Xq11.1-13.1
             Contains a zinc finger protein 208 (ZNF208) pseudogene,
             complete sequence
          Length = 103367

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 56    caaaactcaactgtatttctatac 79
             |||||||||| |||||||||||||
Sbjct: 67212 caaaactcaattgtatttctatac 67235
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>emb|AL035665.32|HS644L1 Human DNA sequence from clone RP4-644L1 on chromosome 20q12 Contains
             the MAFB gene for v-maf musculoaponeurotic fibrosarcoma
             oncogene homolog B (avian), a novel gene and two CpG
             islands, complete sequence
          Length = 145593

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 56    caaaactcaactgtatttctatac 79
             ||||| ||||||||||||||||||
Sbjct: 13232 caaaaatcaactgtatttctatac 13255
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>emb|AL009181.1|HS212P9 Human DNA sequence from clone RP1-212P9 on chromosome 1p34.1-35
             Contains the OPRD1 gene for opioid receptor delta 1, two
             novel genes, the 5' end of the  EPB41 gene for erythrocyte
             membrane protein band 4.1 (elliptocytosis 1, RH-linked)
             and a CpG island, complete sequence
          Length = 148540

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 55    tcaaaactcaactgtatttctata 78
             |||||| |||||||||||||||||
Sbjct: 20058 tcaaaaatcaactgtatttctata 20081
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>gb|AC007998.10| Homo sapiens chromosome 18, clone RP11-322E11, complete sequence
          Length = 207799

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 56    caaaactcaactgtatttctatac 79
             ||||| ||||||||||||||||||
Sbjct: 56889 caaaaatcaactgtatttctatac 56866
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>emb|AL109946.12|HSJ820B18 Human DNA sequence from clone RP5-820B18 on chromosome Xq22.2-23
            Contains part of a novel gene for a protein similar to
            nuclear cap binding protein and the 5' end of the MID1
            gene for midline 1 (Opitz/BBB syndrome) protein, complete
            sequence
          Length = 94081

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 56   caaaactcaactgtatttctatac 79
            ||||| ||||||||||||||||||
Sbjct: 9071 caaaaatcaactgtatttctatac 9094
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>gb|AC120053.4| Homo sapiens chromosome 8, clone CTD-2006H14, complete sequence
          Length = 124497

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 56   caaaactcaactgtatttctatac 79
            ||||| ||||||||||||||||||
Sbjct: 5161 caaaaatcaactgtatttctatac 5184
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>gb|AC010834.19| Homo sapiens chromosome 8, clone RP11-10N23, complete sequence
          Length = 175967

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 56    caaaactcaactgtatttctatac 79
             ||||| ||||||||||||||||||
Sbjct: 65642 caaaaatcaactgtatttctatac 65619
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>gb|AC069222.23| Homo sapiens 3 BAC RP11-383I23 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 117000

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 36    tgtgtcaaaatattcttcct 55
             ||||||||||||||||||||
Sbjct: 60411 tgtgtcaaaatattcttcct 60430
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 103      caattaattaactggtgggt 122
                ||||||||||||||||||||
Sbjct: 17434020 caattaattaactggtgggt 17434039
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 143      tctcatctcatggggcaggt 162
                ||||||||||||||||||||
Sbjct: 23780406 tctcatctcatggggcaggt 23780425
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>gb|AC008281.3| Homo sapiens BAC clone RP11-481E6 from 2, complete sequence
          Length = 131085

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 57    aaaactcaactgtatttcta 76
             ||||||||||||||||||||
Sbjct: 85055 aaaactcaactgtatttcta 85036
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>dbj|AP003330.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1085F01
          Length = 163671

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 143    tctcatctcatggggcaggt 162
              ||||||||||||||||||||
Sbjct: 158110 tctcatctcatggggcaggt 158129
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>gb|AC004826.3|AC004826 Homo sapiens PAC clone RP1-309D19 from 5, complete sequence
          Length = 149172

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 56    caaaactcaactgtatttctatac 79
             ||||| ||||||||||||||||||
Sbjct: 40483 caaaaatcaactgtatttctatac 40506
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>gb|AC010087.3| Homo sapiens BAC clone RP11-241M13 from 2, complete sequence
          Length = 202029

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 56     caaaactcaactgtatttctatac 79
              ||||| ||||||||||||||||||
Sbjct: 131285 caaaaatcaactgtatttctatac 131308
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>gb|AC113382.2| Homo sapiens chromosome 5 clone RP11-325L7, complete sequence
          Length = 166870

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 56    caaaactcaactgtatttctatac 79
             ||||| ||||||||||||||||||
Sbjct: 55239 caaaaatcaactgtatttctatac 55216
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 229     ccttgatctgcttcaccggg 248
               ||||||||||||||||||||
Sbjct: 1419466 ccttgatctgcttcaccggg 1419447
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>dbj|AP003022.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0681B11
          Length = 144091

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 143   tctcatctcatggggcaggt 162
             ||||||||||||||||||||
Sbjct: 60991 tctcatctcatggggcaggt 61010
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>gb|CP000029.1| Staphylococcus epidermidis RP62A, complete genome
          Length = 2616530

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 35      ctgtgtcaaaatattcttcc 54
               ||||||||||||||||||||
Sbjct: 2078209 ctgtgtcaaaatattcttcc 2078228
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>dbj|AK099765.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094O21, full
            insert sequence
          Length = 2858

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 143  tctcatctcatggggcaggt 162
            ||||||||||||||||||||
Sbjct: 1379 tctcatctcatggggcaggt 1398
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>gb|AY530950.1| Zea mays putative zinc finger protein (Z438D03.1), unknown (Z438D03.5),
             epsilon-COP (Z438D03.6), putative kinase (Z438D03.7),
             unknown (Z438D03.25), and C1-B73 (Z438D03.27) genes,
             complete cds
          Length = 185988

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 270   tccgcgaaaacgatggcaac 289
             ||||||||||||||||||||
Sbjct: 11813 tccgcgaaaacgatggcaac 11832
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>emb|AL132778.6|CNS01DTJ Human chromosome 14 DNA sequence BAC C-2568P8 of library CalTech-D from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 170125

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 29     attcaactgtgtcaaaatat 48
              ||||||||||||||||||||
Sbjct: 130117 attcaactgtgtcaaaatat 130098
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>dbj|AP000486.6| Homo sapiens genomic DNA, chromosome 11q, clone:CMB9-23I22, complete
              sequence
          Length = 152472

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 56     caaaactcaactgtatttctatac 79
              ||||| ||||||||||||||||||
Sbjct: 113042 caaaaatcaactgtatttctatac 113065
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 103      caattaattaactggtgggt 122
                ||||||||||||||||||||
Sbjct: 17388391 caattaattaactggtgggt 17388410
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>emb|AL731763.1|CNS07YQA Oryza sativa chromosome 12, . BAC OSJNBa0090O14 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 129619

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 103   caattaattaactggtgggt 122
             ||||||||||||||||||||
Sbjct: 98386 caattaattaactggtgggt 98367
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>emb|AL122057.4|CNS01DSZ Human chromosome 14 DNA sequence BAC R-246E14 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 163149

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 29    attcaactgtgtcaaaatat 48
             ||||||||||||||||||||
Sbjct: 66103 attcaactgtgtcaaaatat 66084


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,887,111
Number of Sequences: 3902068
Number of extensions: 2887111
Number of successful extensions: 55685
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 55433
Number of HSP's gapped (non-prelim): 252
length of query: 322
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 300
effective length of database: 17,147,199,772
effective search space: 5144159931600
effective search space used: 5144159931600
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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