ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl27c06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1DNJ5_CAEEL (Q09446) DnaJ homolog dnj-5 (DnaJ domain protein 5) 31 0.83
2CTR1_ANOGA (Q27289) Chymotrypsin-1 precursor (EC 3.4.21.1) 31 0.83
3CTR2_ANOGA (Q17025) Chymotrypsin-2 precursor (EC 3.4.21.1) 31 0.83
4Y4466_ARATH (Q9SB61) ZF-HD homeobox protein At4g24660 (AtHB-22) 30 1.8
5CP4Z1_HUMAN (Q86W10) Cytochrome P450 4Z1 (EC 1.14.14.1) (CYPIVZ1) 29 3.2
6GATA7_ARATH (Q9SKN6) Putative GATA transcription factor 7 28 4.1
7MSHM_SARGL (O63852) Mitochondrial MutS protein homolog 28 5.4
8P53_RABIT (Q95330) Cellular tumor antigen p53 (Tumor suppressor ... 28 5.4
9KNRL_DROME (P13054) Knirps-related protein 28 7.0
10TAP_DROME (O16867) Basic helix-loop-helix neural transcription f... 27 9.2
11COX1_EMENI (P00402) Cytochrome c oxidase subunit 1 (EC 1.9.3.1) ... 27 9.2
12WRK32_ARATH (P59583) Probable WRKY transcription factor 32 (WRKY... 27 9.2
13YK82_SCHPO (Q9HGP4) Hypothetical bromodomain protein C631.02 27 9.2
14MK07_MOUSE (Q9WVS8) Mitogen-activated protein kinase 7 (EC 2.7.1... 27 9.2

>DNJ5_CAEEL (Q09446) DnaJ homolog dnj-5 (DnaJ domain protein 5)|
          Length = 915

 Score = 30.8 bits (68), Expect = 0.83
 Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 9/65 (13%)
 Frame = +2

Query: 125 PYSPLH---SIPGPASTT---SWSLLNNSW---RYRAEHQS*SEITMLEMANGLLNPPAT 277
           PYSP H    +P  A+TT   S SL +++W     + E  S   ++ L +A G  +P   
Sbjct: 70  PYSPRHESWGLPSNANTTLLGSSSLTSSNWFPFTDQKETSSNEILSSLNLAAGSSSPALP 129

Query: 278 STPTR 292
           STP+R
Sbjct: 130 STPSR 134



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>CTR1_ANOGA (Q27289) Chymotrypsin-1 precursor (EC 3.4.21.1)|
          Length = 259

 Score = 30.8 bits (68), Expect = 0.83
 Identities = 16/36 (44%), Positives = 17/36 (47%)
 Frame = +2

Query: 107 AK*SSAPYSPLHSIPGPASTTSWSLLNNSWRYRAEH 214
           AK  SAPY     +PG       SLLNN W   A H
Sbjct: 39  AKNGSAPYQVSLQVPGWGHNCGGSLLNNRWVLTAAH 74



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>CTR2_ANOGA (Q17025) Chymotrypsin-2 precursor (EC 3.4.21.1)|
          Length = 258

 Score = 30.8 bits (68), Expect = 0.83
 Identities = 16/36 (44%), Positives = 17/36 (47%)
 Frame = +2

Query: 107 AK*SSAPYSPLHSIPGPASTTSWSLLNNSWRYRAEH 214
           AK  SAPY     +PG       SLLNN W   A H
Sbjct: 39  AKNGSAPYQVSLQVPGWGHNCGGSLLNNRWVLTAAH 74



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>Y4466_ARATH (Q9SB61) ZF-HD homeobox protein At4g24660 (AtHB-22)|
          Length = 220

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 26/69 (37%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
 Frame = +3

Query: 33  FKRKDTTSSLLQER*HTAHAY----PQ-HQQNNLLHLTPPYTPFQDQPRLPAGRF*TIHG 197
           F RK+T S  +  R H    Y    PQ HQ    LHLT P  P+    R PA       G
Sbjct: 94  FHRKETES--IGGRAHRVPTYYNRPPQPHQPPGYLHLTSPAAPY----RPPAA-----SG 142

Query: 198 DTEQSTNPN 224
           D E ++NP+
Sbjct: 143 DEEDTSNPS 151



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>CP4Z1_HUMAN (Q86W10) Cytochrome P450 4Z1 (EC 1.14.14.1) (CYPIVZ1)|
          Length = 505

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +3

Query: 9   KARLKTSIFKRKDTTSSLLQER*HTAHAYPQHQQ 110
           +A +KT +F   DTTSS +    +    YP+HQQ
Sbjct: 305 QAEVKTFMFAGHDTTSSAISWILYCLAKYPEHQQ 338



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>GATA7_ARATH (Q9SKN6) Putative GATA transcription factor 7|
          Length = 315

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +1

Query: 118 FCTLLPPTLHSRTSLDYQLVAFEQFMEIQSRAPILI 225
           F  L+PP L    SL Y+     Q +++Q   PIL+
Sbjct: 48  FQKLVPPPLDELMSLSYEFTCNGQRVQVQKHVPILL 83



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>MSHM_SARGL (O63852) Mitochondrial MutS protein homolog|
          Length = 982

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +2

Query: 14  TIKNKYFQKEGYNIFSSSRKMT 79
           +IK +YF KEGY    SS+K+T
Sbjct: 530 SIKAEYFNKEGYAFSISSKKLT 551



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>P53_RABIT (Q95330) Cellular tumor antigen p53 (Tumor suppressor p53)|
          Length = 391

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = +2

Query: 92  IPATPAK*SSAPYSPLHSIPGPASTTSWSL 181
           +PA PA  + AP +P  + P PA  TSW L
Sbjct: 63  VPAAPAPEAPAPAAPALAAPAPA--TSWPL 90



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>KNRL_DROME (P13054) Knirps-related protein|
          Length = 647

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 9/28 (32%), Positives = 19/28 (67%)
 Frame = +3

Query: 93  YPQHQQNNLLHLTPPYTPFQDQPRLPAG 176
           +   +++ ++ +TPP++P Q + R PAG
Sbjct: 460 HDDEEEDLVVSMTPPHSPAQQEERTPAG 487



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>TAP_DROME (O16867) Basic helix-loop-helix neural transcription factor TAP|
           (Target of Poxn protein) (Protein biparous)
          Length = 398

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 6/95 (6%)
 Frame = +2

Query: 26  KYFQKEGYNIFSSSRKMTH-SPCIPATPAK*SSAPYSPLHSIPGPASTTSWSLLNNSWRY 202
           K F+ E     SS R++   +P  PA P   S   +  +     PA      LL+ S   
Sbjct: 32  KSFETEAQ--LSSRRRLDFGTPPTPAIPQPYSGGTWDAVPLSSPPAGFVG--LLDTS--- 84

Query: 203 RAEHQS*SEITMLE-----MANGLLNPPATSTPTR 292
            + H + S  T++E       NG+ +PP TSTP +
Sbjct: 85  -SNHSTRSGRTLVEHLNSRATNGVFDPPLTSTPVK 118



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>COX1_EMENI (P00402) Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c|
           oxidase polypeptide I)
          Length = 567

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +1

Query: 73  DDTQPMHTRNTSKIIFCTLLPPTLHSRTSLDYQ 171
           D  Q + TRN S + +C   PP  H+  SL  Q
Sbjct: 534 DTFQVLFTRNNSSLEWCLTSPPKPHAFASLPLQ 566



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>WRK32_ARATH (P59583) Probable WRKY transcription factor 32 (WRKY DNA-binding|
           protein 32)
          Length = 466

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +2

Query: 50  NIFSSSRKMTHSPCIPATPAK*SSAPYSPLHSIP 151
           ++ +SS  +T +PC+   PA  S+A   PL S+P
Sbjct: 109 SLAASSDSLTVTPCLSLDPATASTAQDLPLVSVP 142



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>YK82_SCHPO (Q9HGP4) Hypothetical bromodomain protein C631.02|
          Length = 727

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 4/34 (11%)
 Frame = +3

Query: 120 LHLTPPYTPFQDQ----PRLPAGRF*TIHGDTEQ 209
           LH TPPYT F D+    P  P+    T+ GD+++
Sbjct: 88  LHPTPPYTNFDDESPSSPTHPSVSNITVDGDSKK 121



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>MK07_MOUSE (Q9WVS8) Mitogen-activated protein kinase 7 (EC 2.7.11.24)|
           (Extracellular signal-regulated kinase 5) (ERK-5) (BMK1
           kinase)
          Length = 806

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = +2

Query: 95  PATPAK*SSAPYSPLHSIPGPAS 163
           P  P   S+ P  P  SIPGPAS
Sbjct: 602 PTGPVSQSTGPLQPAGSIPGPAS 624


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,116,574
Number of Sequences: 219361
Number of extensions: 1250031
Number of successful extensions: 2916
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2916
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 1396778976
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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