ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl27c05 |
|---|---|
| Clone Library Name | barley_pub |
>NOX3_RAT (Q672K1) NADPH oxidase 3 (EC 1.6.3.-)| Length = 568 Score = 58.2 bits (139), Expect = 1e-08 Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 2/67 (2%) Frame = -3 Query: 452 GTRVKTHFARPNWRNVYKRIALNHREQRVGVFYCGAPVLTKELRELAQDFSRK--TNTKF 279 G + KT + RPNW +K+IA NH +GVF+CG ++K L+++ + +S F Sbjct: 502 GLKQKTFYGRPNWNEEFKQIAYNHPSSSIGVFFCGPKAMSKTLQKMCRLYSSSDPRGVHF 561 Query: 278 EFHKENF 258 ++KENF Sbjct: 562 YYNKENF 568
>NOX3_HUMAN (Q9HBY0) NADPH oxidase 3 (EC 1.6.3.-) (gp91phox homolog 3) (GP91-3)| (Mitogenic oxidase 2) Length = 568 Score = 57.4 bits (137), Expect = 2e-08 Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 2/67 (2%) Frame = -3 Query: 452 GTRVKTHFARPNWRNVYKRIALNHREQRVGVFYCGAPVLTKELRELAQDFSR--KTNTKF 279 G + KT + RPNW N +K+IA NH +GVF+CG L++ L+++ +S F Sbjct: 502 GLKQKTFYGRPNWNNEFKQIAYNHPSSSIGVFFCGPKALSRTLQKMCHLYSSADPRGVHF 561 Query: 278 EFHKENF 258 ++KE+F Sbjct: 562 YYNKESF 568
>NOX1_RAT (Q9WV87) NADPH oxidase homolog 1 (NOX-1) (NOH-1) (NADH/NADPH| mitogenic oxidase subunit P65-MOX) (Mitogenic oxidase 1) (MOX1) Length = 563 Score = 57.0 bits (136), Expect = 2e-08 Identities = 29/67 (43%), Positives = 37/67 (55%), Gaps = 2/67 (2%) Frame = -3 Query: 452 GTRVKTHFARPNWRNVYKRIALNHREQRVGVFYCGAPVLTKELRELAQDFSR--KTNTKF 279 G + KT F RP W N + RIA H + VGVF CG P L K LR+ + +S +F Sbjct: 497 GLKQKTSFGRPMWDNEFSRIATAHPKSVVGVFLCGPPTLAKSLRKCCRRYSSLDPRKVQF 556 Query: 278 EFHKENF 258 F+KE F Sbjct: 557 YFNKETF 563
>NOX3_MOUSE (Q672J9) NADPH oxidase 3 (EC 1.6.3.-)| Length = 568 Score = 57.0 bits (136), Expect = 2e-08 Identities = 24/67 (35%), Positives = 41/67 (61%), Gaps = 2/67 (2%) Frame = -3 Query: 452 GTRVKTHFARPNWRNVYKRIALNHREQRVGVFYCGAPVLTKELRELAQDFSR--KTNTKF 279 G + K + RPNW + +K+IA NH +GVF+CG+ ++K L+++ + +S F Sbjct: 502 GLKQKAFYGRPNWNDEFKQIAYNHPSSSIGVFFCGSKAMSKTLQKMCRLYSSVDPRGVHF 561 Query: 278 EFHKENF 258 ++KENF Sbjct: 562 YYNKENF 568
>NOX1_HUMAN (Q9Y5S8) NADPH oxidase homolog 1 (NOX-1) (NOH-1) (NADH/NADPH| mitogenic oxidase subunit P65-MOX) (Mitogenic oxidase 1) (MOX1) Length = 564 Score = 54.3 bits (129), Expect = 1e-07 Identities = 28/67 (41%), Positives = 36/67 (53%), Gaps = 2/67 (2%) Frame = -3 Query: 452 GTRVKTHFARPNWRNVYKRIALNHREQRVGVFYCGAPVLTKELRELAQDFSR--KTNTKF 279 G + KT F RP W N + IA +H + VGVF CG L K LR+ +S +F Sbjct: 498 GLKQKTSFGRPMWDNEFSTIATSHPKSVVGVFLCGPRTLAKSLRKCCHRYSSLDPRKVQF 557 Query: 278 EFHKENF 258 F+KENF Sbjct: 558 YFNKENF 564
>CY24B_HUMAN (P04839) Cytochrome b-245 heavy chain (p22 phagocyte B-cytochrome)| (Neutrophil cytochrome b 91 kDa polypeptide) (CGD91-phox) (gp91-phox) (gp91-1) (Heme-binding membrane glycoprotein gp91phox) (Cytochrome b(558) beta chain) (Cytochrome b558 be Length = 569 Score = 53.5 bits (127), Expect = 2e-07 Identities = 27/67 (40%), Positives = 36/67 (53%), Gaps = 2/67 (2%) Frame = -3 Query: 452 GTRVKTHFARPNWRNVYKRIALNHREQRVGVFYCGAPVLTKEL--RELAQDFSRKTNTKF 279 G + KT + RPNW N +K IA H R+GVF CG L + L + ++ S F Sbjct: 503 GLKQKTLYGRPNWDNEFKTIASQHPNTRIGVFLCGPEALAETLSKQSISNSESGPRGVHF 562 Query: 278 EFHKENF 258 F+KENF Sbjct: 563 IFNKENF 569
>CY24B_PIG (P52649) Cytochrome b-245 heavy chain (p22 phagocyte B-cytochrome)| (Neutrophil cytochrome b 91 kDa polypeptide) (CGD91-phox) (gp91-phox) (gp91-1) (Heme-binding membrane glycoprotein gp91phox) (Cytochrome b(558) beta chain) (Cytochrome b558 beta Length = 484 Score = 53.5 bits (127), Expect = 2e-07 Identities = 27/67 (40%), Positives = 36/67 (53%), Gaps = 2/67 (2%) Frame = -3 Query: 452 GTRVKTHFARPNWRNVYKRIALNHREQRVGVFYCGAPVLTKELRE--LAQDFSRKTNTKF 279 G + KT + RPNW N +K IA H R+GVF CG L + L + ++ S F Sbjct: 418 GLKQKTLYGRPNWDNEFKTIASQHPTTRIGVFLCGPEALAETLNKQCISNSDSSPRGVHF 477 Query: 278 EFHKENF 258 F+KENF Sbjct: 478 IFNKENF 484
>CY24B_MOUSE (Q61093) Cytochrome b-245 heavy chain (p22 phagocyte B-cytochrome)| (Neutrophil cytochrome b 91 kDa polypeptide) (CGD91-phox) (gp91-phox) (gp91-1) (Heme-binding membrane glycoprotein gp91phox) (Cytochrome b(558) beta chain) (Cytochrome b558 be Length = 570 Score = 51.2 bits (121), Expect = 1e-06 Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%) Frame = -3 Query: 452 GTRVKTHFARPNWRNVYKRIALNHREQRVGVFYCGAPVLTKEL--RELAQDFSRKTNTKF 279 G + KT + RPNW N +K IA H +GVF CG L + L + ++ S F Sbjct: 504 GLKQKTLYGRPNWDNEFKTIASEHPNTTIGVFLCGPEALAETLSKQSISNSESGPRGVHF 563 Query: 278 EFHKENF 258 F+KENF Sbjct: 564 IFNKENF 570
>CY24B_BOVIN (O46522) Cytochrome b-245 heavy chain (p22 phagocyte B-cytochrome)| (Neutrophil cytochrome b 91 kDa polypeptide) (CGD91-phox) (gp91-phox) (gp91-1) (Heme-binding membrane glycoprotein gp91phox) (Cytochrome b(558) beta chain) (Cytochrome b558 be Length = 570 Score = 51.2 bits (121), Expect = 1e-06 Identities = 26/67 (38%), Positives = 34/67 (50%), Gaps = 2/67 (2%) Frame = -3 Query: 452 GTRVKTHFARPNWRNVYKRIALNHREQRVGVFYCGAPVLTKELRE--LAQDFSRKTNTKF 279 G + KT + RPNW N +K I H R+GVF CG L L + ++ S F Sbjct: 504 GLKQKTLYGRPNWDNEFKTIGSQHPNTRIGVFLCGPEALADTLNKQCISNSDSGPRGVHF 563 Query: 278 EFHKENF 258 F+KENF Sbjct: 564 IFNKENF 570
>CY24B_BISBI (Q95L74) Cytochrome b-245 heavy chain (p22 phagocyte B-cytochrome)| (Neutrophil cytochrome b 91 kDa polypeptide) (CGD91-phox) (gp91-phox) (gp91-1) (Heme-binding membrane glycoprotein gp91phox) (Cytochrome b(558) beta chain) (Cytochrome b558 be Length = 570 Score = 51.2 bits (121), Expect = 1e-06 Identities = 26/67 (38%), Positives = 34/67 (50%), Gaps = 2/67 (2%) Frame = -3 Query: 452 GTRVKTHFARPNWRNVYKRIALNHREQRVGVFYCGAPVLTKELRE--LAQDFSRKTNTKF 279 G + KT + RPNW N +K I H R+GVF CG L L + ++ S F Sbjct: 504 GLKQKTLYGRPNWDNEFKTIGSQHPNTRIGVFLCGPEALADTLNKQCISNSDSGPRGVHF 563 Query: 278 EFHKENF 258 F+KENF Sbjct: 564 IFNKENF 570
>DUOX1_CANFA (Q9MZF4) Dual oxidase 1 precursor (EC 1.6.3.1) (EC 1.11.1.-) (NADPH| thyroid oxidase 1) (Thyroid oxidase 1) Length = 1551 Score = 50.8 bits (120), Expect = 2e-06 Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 1/66 (1%) Frame = -3 Query: 452 GTRVKTHFARPNWRNVYKRIALNHREQR-VGVFYCGAPVLTKELRELAQDFSRKTNTKFE 276 G R THF RP + +K + H + R +GVF CG P +TK + + Q +R+ T F Sbjct: 1486 GLRSITHFGRPPFEPFFKSLQEVHPQVRKIGVFSCGPPGMTKNVEKACQLINRQDRTHFS 1545 Query: 275 FHKENF 258 H ENF Sbjct: 1546 HHYENF 1551
>DUOX1_PIG (Q8HZK3) Dual oxidase 1 precursor (EC 1.6.3.1) (EC 1.11.1.-)| Length = 1553 Score = 48.9 bits (115), Expect = 6e-06 Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 1/66 (1%) Frame = -3 Query: 452 GTRVKTHFARPNWRNVYKRIALNHREQR-VGVFYCGAPVLTKELRELAQDFSRKTNTKFE 276 G R THF RP + + + H + R +GVF CG P +TK + + Q +R+ T F Sbjct: 1488 GLRSITHFGRPPFEPFFNSLQEVHPQVRKIGVFSCGPPGMTKNVEKACQLINRQDRTHFS 1547 Query: 275 FHKENF 258 H ENF Sbjct: 1548 HHYENF 1553
>DUOX1_HUMAN (Q9NRD9) Dual oxidase 1 precursor (EC 1.6.3.1) (EC 1.11.1.-) (NADPH| thyroid oxidase 1) (Thyroid oxidase 1) (Large NOX 1) (Long NOX 1) Length = 1551 Score = 48.9 bits (115), Expect = 6e-06 Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 1/66 (1%) Frame = -3 Query: 452 GTRVKTHFARPNWRNVYKRIALNHREQR-VGVFYCGAPVLTKELRELAQDFSRKTNTKFE 276 G R THF RP + + + H + R +GVF CG P +TK + + Q +R+ T F Sbjct: 1486 GLRSITHFGRPPFEPFFNSLQEVHPQVRKIGVFSCGPPGMTKNVEKACQLINRQDRTHFS 1545 Query: 275 FHKENF 258 H ENF Sbjct: 1546 HHYENF 1551
>DUOX2_PIG (Q8HZK2) Dual oxidase 2 precursor (EC 1.6.3.1) (EC 1.11.1.-)| (NADH/NADPH thyroid oxidase p138-tox) Length = 1545 Score = 48.1 bits (113), Expect = 1e-05 Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 1/66 (1%) Frame = -3 Query: 452 GTRVKTHFARPNWRNVYKRIALNHREQR-VGVFYCGAPVLTKELRELAQDFSRKTNTKFE 276 G R THF RP + + + H + R +GVF CG P +TK + + Q +R+ T F Sbjct: 1480 GLRSITHFGRPPFEPFFNSLQEVHPQVRKIGVFSCGPPGMTKNVEKTCQLINRQDQTHFV 1539 Query: 275 FHKENF 258 H ENF Sbjct: 1540 HHYENF 1545
>DUOX1_RAT (Q8CIY2) Dual oxidase 1 precursor (EC 1.6.3.1) (EC 1.11.1.-)| Length = 1551 Score = 48.1 bits (113), Expect = 1e-05 Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 1/66 (1%) Frame = -3 Query: 452 GTRVKTHFARPNWRNVYKRIALNHREQR-VGVFYCGAPVLTKELRELAQDFSRKTNTKFE 276 G R THF RP + + + H + R +GVF CG P +TK + + Q +++ T F Sbjct: 1486 GLRSVTHFGRPPFEPFFNSLQEVHPQVRKIGVFSCGPPGMTKNVEKACQLINKQDRTHFS 1545 Query: 275 FHKENF 258 H ENF Sbjct: 1546 HHYENF 1551
>DUOX2_HUMAN (Q9NRD8) Dual oxidase 2 precursor (EC 1.6.3.1) (EC 1.11.1.-) (NADPH| oxidase/peroxidase DUOX2) (NADPH thyroid oxidase 2) (Thyroid oxidase 2) (NADH/NADPH thyroid oxidase p138-tox) (p138 thyroid oxidase) (Large NOX 2) (Long NOX 2) Length = 1548 Score = 45.8 bits (107), Expect = 5e-05 Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 1/66 (1%) Frame = -3 Query: 452 GTRVKTHFARPNWRNVYKRIALNHREQR-VGVFYCGAPVLTKELRELAQDFSRKTNTKFE 276 G R THF RP + + + H + R +GVF CG P +TK + + Q +R+ F Sbjct: 1483 GLRSITHFGRPPFEPFFNSLQEVHPQVRKIGVFSCGPPGMTKNVEKACQLVNRQDRAHFM 1542 Query: 275 FHKENF 258 H ENF Sbjct: 1543 HHYENF 1548
>NOX5_HUMAN (Q96PH1) NADPH oxidase 5 (EC 1.6.3.-)| Length = 765 Score = 44.7 bits (104), Expect = 1e-04 Identities = 22/65 (33%), Positives = 37/65 (56%) Frame = -3 Query: 452 GTRVKTHFARPNWRNVYKRIALNHREQRVGVFYCGAPVLTKELRELAQDFSRKTNTKFEF 273 G + +T RP+W V++++A ++ +V VF+CG+P L K L+ + F F F Sbjct: 708 GLQTRTQPGRPDWSKVFQKVAAE-KKGKVQVFFCGSPALAKVLKGHCEKFG------FRF 760 Query: 272 HKENF 258 +ENF Sbjct: 761 FQENF 765
>DUOX2_RAT (Q9ES45) Dual oxidase 2 precursor (EC 1.6.3.1) (EC 1.11.1.-)| (NADH/NADPH thyroid oxidase THOX2) (Thyroid oxidase 2) (Large NOX 2) (Long NOX 2) Length = 1517 Score = 43.9 bits (102), Expect = 2e-04 Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Frame = -3 Query: 452 GTRVKTHFARPNWRNVYKRIALNHRE-QRVGVFYCGAPVLTKELRELAQDFSRKTNTKFE 276 G R THF RP + + H + ++GVF CG P +TK + + Q +R+ F Sbjct: 1452 GLRSVTHFGRPPFELFLDSLQEVHPQVHKIGVFSCGPPGMTKNVEKACQLINRQDRAHFV 1511 Query: 275 FHKENF 258 H ENF Sbjct: 1512 HHYENF 1517
>DUOX1_CAEEL (O61213) Dual oxidase 1 precursor (EC 1.6.3.1) (EC 1.11.1.-) (DUOX1)| (NADPH thyroid oxidase 1) (Blistered cuticle protein 3) Length = 1497 Score = 42.7 bits (99), Expect = 4e-04 Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Frame = -3 Query: 452 GTRVKTHFARPNWRNVYKRIALNHREQ-RVGVFYCGAPVLTKELRELAQDFSRKTNTKFE 276 G K HF RPN++ ++ I H+EQ ++GVF CG L + + E D +R+ + Sbjct: 1431 GLHAKNHFGRPNFKAFFQFIQSEHKEQSKIGVFSCGPVNLNESIAEGCADANRQRDAPSF 1490 Query: 275 FHK 267 H+ Sbjct: 1491 AHR 1493
>DUOX_DROME (Q9VQH2) Dual oxidase (EC 1.6.3.1) (EC 1.11.1.-)| Length = 1475 Score = 34.7 bits (78), Expect = 0.11 Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 2/67 (2%) Frame = -3 Query: 452 GTRVKTHFARPNWRNVYKRIALNHRE-QRVGVFYCGAPVLTKELRELAQDFSRKTNTK-F 279 G + HF RP+ + K + H ++GVF CG LTK + + ++ F Sbjct: 1408 GLKAVNHFGRPDMSSFLKFVQKKHSYVSKIGVFSCGPRPLTKSVMSACDEVNKTRKLPYF 1467 Query: 278 EFHKENF 258 H ENF Sbjct: 1468 IHHFENF 1474
>TEGU_SHV21 (Q01056) Probable large tegument protein| Length = 2469 Score = 30.0 bits (66), Expect = 2.8 Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%) Frame = +2 Query: 89 PLLSITHKYKTCHVLNQHIQYL-L*SSSSTHEYKNLL 196 P I H Y T V N HI + L ++S+ H+YK++L Sbjct: 2100 PTFKIEHDYNTNSVYNNHINNINLTNNSTYHQYKDVL 2136
>ZN696_HUMAN (Q9H7X3) Zinc finger protein 696| Length = 374 Score = 29.6 bits (65), Expect = 3.7 Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 1/31 (3%) Frame = +2 Query: 344 VHRSRILRHA-VHGG*GRYACRRCANLVGQS 433 +H S ++RH H G YAC C GQS Sbjct: 163 IHSSHVVRHQRAHSGERPYACAECGKAFGQS 193
>XDH_BOVIN (P80457) Xanthine dehydrogenase/oxidase [Includes: Xanthine| dehydrogenase (EC 1.17.1.4) (XD); Xanthine oxidase (EC 1.17.3.2) (XO) (Xanthine oxidoreductase)] Length = 1331 Score = 29.3 bits (64), Expect = 4.8 Identities = 18/52 (34%), Positives = 28/52 (53%) Frame = -3 Query: 416 WRNVYKRIALNHREQRVGVFYCGAPVLTKELRELAQDFSRKTNTKFEFHKEN 261 W+N+YK L H QR+ F P E + +Q ++RK+ +F+KEN Sbjct: 942 WKNMYKEGDLTHFNQRLEGF--SVPRCWDECLKSSQYYARKSEVD-KFNKEN 990
>ZN587_HUMAN (Q96SQ5) Zinc finger protein 587| Length = 575 Score = 28.9 bits (63), Expect = 6.3 Identities = 13/29 (44%), Positives = 14/29 (48%) Frame = +2 Query: 353 SRILRHAVHGG*GRYACRRCANLVGQSGS 439 S I VH G G Y CR C GQ G+ Sbjct: 310 SLISHQLVHTGEGPYECRECGKSFGQKGN 338
>CABC_PROVU (P59807) Chondroitin ABC lyase 1 precursor (EC 4.2.2.4)| (Chondroitin ABC lyase I) (Chondroitinase ABC) (Chondroitin sulfate lyase) (Chondroitin ABC eliminase) Length = 1021 Score = 28.9 bits (63), Expect = 6.3 Identities = 22/76 (28%), Positives = 39/76 (51%) Frame = +2 Query: 86 VPLLSITHKYKTCHVLNQHIQYLL*SSSSTHEYKNLLCTELTHFPQKELVAGLSTEVKNS 265 +P+ T T +L+ + +S+ + KNL+ +E+ HF Q +A S++ KNS Sbjct: 1 MPIFRFTALAMTLGLLSAPYNAMAATSNPAFDPKNLMQSEIYHFAQNNPLADFSSD-KNS 59 Query: 266 PCGTRILCLSFSRNLV 313 IL LS R+++ Sbjct: 60 -----ILTLSDKRSIM 70 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 63,487,739 Number of Sequences: 219361 Number of extensions: 1215544 Number of successful extensions: 3357 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 3141 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3353 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2793557952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
