Clone Name | rbastl27c03 |
---|---|
Clone Library Name | barley_pub |
>ATPA_BUCAI (P57122) ATP synthase alpha chain (EC 3.6.3.14) (ATP synthase F1| sector alpha subunit) Length = 512 Score = 30.4 bits (67), Expect = 1.1 Identities = 13/29 (44%), Positives = 19/29 (65%) Frame = +3 Query: 12 YLMVLTRNKVTGTTPDLTQLLYIPTLAGD 98 Y+ +T+NK+TG T +T L I T +GD Sbjct: 308 YVQKITKNKITGKTGSITALPIIETQSGD 336
>KPK1_PHAVU (P15792) Protein kinase PVPK-1 (EC 2.7.11.1)| Length = 609 Score = 30.0 bits (66), Expect = 1.4 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = -3 Query: 402 NWALIRWTAPPETPKSIV 349 NWALIR PPE P+ ++ Sbjct: 569 NWALIRCATPPEVPRQVI 586
>SCRN1_HUMAN (Q12765) Secernin-1| Length = 414 Score = 29.6 bits (65), Expect = 1.8 Identities = 15/46 (32%), Positives = 21/46 (45%) Frame = +1 Query: 37 KLQAQHPTLLSYSTSQHWQVTTDNSSSTEKLQGGGDRGNCGTTTSS 174 K+ A+HP L SY+ SQ W + +E D +CG S Sbjct: 196 KMDAEHPELRSYAQSQGWWTGEGEFNFSEVFSPVEDHLDCGAGKDS 241
>SCRN1_MOUSE (Q9CZC8) Secernin-1| Length = 414 Score = 29.3 bits (64), Expect = 2.3 Identities = 13/40 (32%), Positives = 19/40 (47%) Frame = +1 Query: 37 KLQAQHPTLLSYSTSQHWQVTTDNSSSTEKLQGGGDRGNC 156 KL +HP L +Y+ SQ W D + + DR +C Sbjct: 196 KLDEEHPELRTYAQSQGWWTGDDEFNFAQVFSPADDRLDC 235
>G11A_ORYSA (P47997) Protein kinase G11A (EC 2.7.11.1)| Length = 589 Score = 28.9 bits (63), Expect = 3.1 Identities = 10/17 (58%), Positives = 13/17 (76%) Frame = -3 Query: 402 NWALIRWTAPPETPKSI 352 NWALIR +PPE P+ + Sbjct: 537 NWALIRCASPPEVPRPV 553
>KPK7_ARATH (Q05999) Putative serine/threonine-protein kinase PK7 (EC 2.7.11.1)| Length = 578 Score = 28.9 bits (63), Expect = 3.1 Identities = 10/17 (58%), Positives = 14/17 (82%) Frame = -3 Query: 402 NWALIRWTAPPETPKSI 352 NWALIR T+PP+ P+ + Sbjct: 520 NWALIRCTSPPQIPQPV 536
>CX32_MICUN (P51915) Gap junction Cx32.2 protein (Connexin-32.2)| Length = 284 Score = 28.1 bits (61), Expect = 5.2 Identities = 11/22 (50%), Positives = 15/22 (68%) Frame = -1 Query: 167 VVVPQFPLSPPPCSFSVEDELS 102 ++VP FP S PC F+VE +S Sbjct: 165 IMVPMFPCSKKPCPFTVECYMS 186
>ABCG2_RAT (Q80W57) ATP-binding cassette sub-family G member 2 (Breast cancer| resistance protein 1 homolog) Length = 657 Score = 28.1 bits (61), Expect = 5.2 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = +3 Query: 108 LIFNRKTAGGWGQGELWDYYF*LPRYGYSSEQ 203 L+ N +T G W W YF +PRYG+++ Q Sbjct: 554 LLVNLRTIGPWLS---WLQYFSIPRYGFTALQ 582
>ABCG2_MOUSE (Q7TMS5) ATP-binding cassette sub-family G member 2 (Breast cancer| resistance protein 1 homolog) Length = 657 Score = 28.1 bits (61), Expect = 5.2 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = +3 Query: 108 LIFNRKTAGGWGQGELWDYYF*LPRYGYSSEQ 203 L+ N +T G W W YF +PRYG+++ Q Sbjct: 554 LLVNLRTIGPWLS---WLQYFSIPRYGFTALQ 582
>TRI37_HUMAN (O94972) Tripartite motif protein 37 (Mulibrey nanism protein)| Length = 964 Score = 27.7 bits (60), Expect = 6.8 Identities = 10/33 (30%), Positives = 17/33 (51%) Frame = +1 Query: 34 IKLQAQHPTLLSYSTSQHWQVTTDNSSSTEKLQ 132 ++ Q + PT S QHW +T ++ T +Q Sbjct: 399 LRFQVRSPTFFQKSRDQHWYITQLEAAQTSYIQ 431
>ATS20_MOUSE (P59511) ADAMTS-20 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase with thrombospondin motifs 20) (ADAM-TS 20) (ADAM-TS20) Length = 1906 Score = 27.7 bits (60), Expect = 6.8 Identities = 12/31 (38%), Positives = 17/31 (54%) Frame = -2 Query: 379 CTAGDPEKHRRSLNPYGSRGTEEEGRQVPRV 287 C GD + +N +G R E E R++PRV Sbjct: 978 CGGGDKTRESYCVNGFGHRLAESECRELPRV 1008
>SYG_BOMMO (Q04451) Glycyl-tRNA synthetase (EC 6.1.1.14) (Glycine--tRNA| ligase) (GlyRS) Length = 680 Score = 27.3 bits (59), Expect = 8.9 Identities = 10/24 (41%), Positives = 13/24 (54%) Frame = -1 Query: 113 DELSVVTCQCWDVE*LSKVGCCAC 42 +E++ C CWD E LS G C Sbjct: 379 NEMAHYACDCWDAECLSSYGWIEC 402
>ABCG2_PIG (Q8MIB3) ATP-binding cassette sub-family G member 2 (Brain| multidrug resistance protein) Length = 656 Score = 27.3 bits (59), Expect = 8.9 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = +3 Query: 108 LIFNRKTAGGWGQGELWDYYF*LPRYGYSSEQ 203 L+ N KT W W YF +PRYG+S+ Q Sbjct: 555 LLVNLKTVVPWLS---WLQYFSIPRYGFSALQ 583
>CDKL2_MACFA (Q4R7T5) Cyclin-dependent kinase-like 2 (EC 2.7.11.22)| Length = 570 Score = 27.3 bits (59), Expect = 8.9 Identities = 12/40 (30%), Positives = 19/40 (47%) Frame = +2 Query: 251 KSSNSMSSPFIRNSRHLPSFFFRATATVRVEASTMLFGVS 370 + + S PF++ +RH PS + T V + LF S Sbjct: 444 EKTKKCSIPFVKPNRHSPSGIYNINVTTLVSSEKSLFRAS 483 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 47,761,997 Number of Sequences: 219361 Number of extensions: 730504 Number of successful extensions: 2131 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 2094 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2130 length of database: 80,573,946 effective HSP length: 110 effective length of database: 56,444,236 effective search space used: 1354661664 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)