ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl27c03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK065005.1| Oryza sativa (japonica cultivar-group) cDNA clon... 115 1e-22
2gb|AC119820.20| Mus musculus chromosome 1, clone RP23-148M18, co... 62 1e-06
3gb|AC158793.4| Mus musculus chromosome 1, clone RP23-269P13, com... 62 1e-06
4gb|AY110365.1| Zea mays CL38215_1 mRNA sequence 58 2e-05
5emb|AL592077.8| Zebrafish DNA sequence from clone XX-DZ35C18, co... 50 0.006
6emb|BX321906.30| Zebrafish DNA sequence from clone DKEYP-45E9 in... 48 0.022
7emb|CR762485.16| Zebrafish DNA sequence from clone DKEY-269K12 i... 46 0.088
8gb|AC121612.2| Mus musculus BAC clone RP23-337A17 from 6, comple... 46 0.088
9gb|AC157606.5| Mus musculus chromosome 7, clone RP23-466J2, comp... 46 0.088
10dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.088
11emb|BX005350.6| Zebrafish DNA sequence from clone DKEY-58C8 in l... 46 0.088
12emb|AL954657.14| Zebrafish DNA sequence from clone CH211-223E21 ... 46 0.088
13gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 46 0.088
14emb|AL935066.2|CNS08CCI Oryza sativa chromosome 12, . BAC OSJNBa... 46 0.088
15emb|AL713909.5|CNS07YQ9 Oryza sativa chromosome 12, . Partial se... 46 0.088
16gb|AC135018.3| Mus musculus BAC clone RP23-124G8 from 6, complet... 46 0.088
17ref|XM_637186.1| Dictyostelium discoideum hypothetical protein (... 44 0.35
18ref|XM_660666.1| Cryptosporidium hominis TU502 hypothetical prot... 44 0.35
19emb|CR533571.9| Zebrafish DNA sequence from clone CH211-209O12 i... 44 0.35
20emb|BX649522.15| Zebrafish DNA sequence from clone DKEY-40I22 in... 44 0.35
21emb|BX248234.13| Zebrafish DNA sequence from clone DKEY-13E15 in... 44 0.35
22emb|BX322566.6| Zebrafish DNA sequence from clone CH211-209B6 in... 44 0.35
23emb|CR391931.7| Zebrafish DNA sequence from clone DKEY-267P8 in ... 44 0.35
24gb|AC166101.4| Mus musculus BAC clone RP23-385P23 from chromosom... 42 1.4
25ref|XM_360388.1| Magnaporthe grisea 70-15 hypothetical protein (... 42 1.4
26gb|AY528739.1| Trypanosoma cruzi chromosome-associated protein G... 42 1.4
27gb|AC122399.4| Mus musculus BAC clone RP24-92B2 from chromosome ... 42 1.4
28emb|CR936846.7| Zebrafish DNA sequence from clone DKEY-20N3 in l... 42 1.4
29emb|BX897684.8| Zebrafish DNA sequence from clone CH211-107A4 in... 42 1.4
30gb|AC122429.3| Mus musculus BAC clone RP24-175I3 from chromosome... 42 1.4
31ref|XM_803756.1| Trypanosoma cruzi strain CL Brener hypothetical... 42 1.4
32emb|BX088589.14| Zebrafish DNA sequence from clone DKEY-27E7 in ... 42 1.4
33emb|BX901914.13| Zebrafish DNA sequence from clone DKEY-27F18 in... 42 1.4
34ref|XM_726040.1| Plasmodium yoelii yoelii str. 17XNL splicing fa... 42 1.4
35emb|BX004862.9| Zebrafish DNA sequence from clone DKEY-200M9 in ... 42 1.4
36gb|AC165428.1| Strongylocentrotus purpuratus BAC clone contig co... 42 1.4
37emb|CR392365.8| Zebrafish DNA sequence from clone DKEY-171P17 in... 42 1.4
38gb|AC127460.2| Homo sapiens chromosome 5 clone RP11-689B23, comp... 42 1.4
39gb|AC113390.3| Homo sapiens chromosome 5 clone RP11-360C3, compl... 42 1.4
40emb|AL606494.4| Mouse DNA sequence from clone RP23-198B6 on chro... 42 1.4
41emb|BX649457.15| Zebrafish DNA sequence from clone DKEYP-87E7 in... 42 1.4
42emb|BX649545.14| Zebrafish DNA sequence from clone CH211-9N13 in... 42 1.4
43emb|BX890573.6| Zebrafish DNA sequence from clone DKEYP-90F5 in ... 42 1.4
44gb|AC151411.2| Mus musculus BAC clone RP24-363M23 from 17, compl... 42 1.4
45gb|DQ079274.1| Drosophila mojavensis strain 15081-1351.03 Acp27a... 42 1.4
46ref|XM_642722.1| Dictyostelium discoideum armadillo repeat-conta... 40 5.4
47ref|XM_637453.1| Dictyostelium discoideum hypothetical protein (... 40 5.4
48gb|AC169504.1| Mus musculus BAC clone RP23-416K3 from chromosome... 40 5.4
49ref|NM_193725.1| Oryza sativa (japonica cultivar-group), predic... 40 5.4
50gb|AC148451.2| Xenopus tropicalis clone CH216-143G2, complete se... 40 5.4
51gb|AY022494.1| Oryza sativa microsatellite MRG4819 containing (A... 40 5.4
52gb|AC144709.2| Danio rerio clone CH211-204P11, complete sequence 40 5.4
53gb|DQ481664.1| Takifugu rubripes HoxAb gene cluster, complete se... 40 5.4
54gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 5.4
55gb|AC115579.3| Dictyostelium discoideum chromosome 2 map 6097680... 40 5.4
56gb|AC161448.4| Mus musculus BAC clone RP24-149K9 from chromosome... 40 5.4
57emb|Z75747.2|HSU96H1 Human DNA sequence from clone LL0XNC01-96H1... 40 5.4
58emb|AL928717.5| Human DNA sequence from clone RP11-363G10 on chr... 40 5.4
59emb|BX538353.1| Cryptosporidium parvum chromosome 6, complete se... 40 5.4
60emb|BX511087.12| Zebrafish DNA sequence from clone DKEY-261O7 in... 40 5.4
61emb|BX897736.7| Zebrafish DNA sequence from clone CH211-181B15 i... 40 5.4
62gb|AC087336.5| Mus musculus chromosome 6, clone RP23-446O7, comp... 40 5.4
63emb|BX323831.7| Zebrafish DNA sequence from clone CH211-12E7 in ... 40 5.4
64ref|XM_627858.1| Cryptosporidium parvum Iowa II hypothetical pro... 40 5.4
65ref|XM_626655.1| Cryptosporidium parvum Iowa II hypothetical pro... 40 5.4
66emb|BX572622.13| Zebrafish DNA sequence from clone CH211-150O20 ... 40 5.4
67dbj|AK053474.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN f... 40 5.4
68gb|AF225480.1|AF225480 Eustenogaster fraterna clone EF131CAT mic... 40 5.4
69dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
70dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
71emb|BX511264.7| Zebrafish DNA sequence from clone DKEY-31O6 in l... 40 5.4
72gb|AC092155.3| Homo sapiens BAC clone RP11-312H10 from 2, comple... 40 5.4
73gb|AC112482.4| Homo sapiens 3 BAC RP11-305F5 (Roswell Park Cance... 40 5.4
74gb|AC104763.12| Homo sapiens chromosome 17, clone RP11-3K24, com... 40 5.4
75dbj|AP003217.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
76emb|AL672015.7| Mouse DNA sequence from clone RP23-154O12 on chr... 40 5.4
77dbj|AK102891.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.4
78dbj|AK059119.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.4
79gb|AY107374.1| Zea mays PCO088426 mRNA sequence 40 5.4
80gb|U31017.1|HSU31017 Hordeum spontaneum CHC 21051 5S rRNA genes,... 40 5.4
81gb|AC126223.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.4
82gb|U26721.1|DVU26721 Drosophila virilis sodium channel protein (... 40 5.4
83emb|AL731678.17| Mouse DNA sequence from clone RP23-39H12 on chr... 40 5.4

>dbj|AK065005.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001E11, full
            insert sequence
          Length = 2911

 Score =  115 bits (58), Expect = 1e-22
 Identities = 76/82 (92%)
 Strand = Plus / Minus

                                                                        
Query: 241  ccaccattagaagagctcaaactcgatgtcgtctccgttcatccggaactcgaggcactt 300
            |||||| ||||||||||||||||| ||||||||||| |||| || |||||| ||||||||
Sbjct: 2707 ccaccactagaagagctcaaactcaatgtcgtctccattcagcctgaactccaggcactt 2648

                                  
Query: 301  gccttccttcttcttccgtgcc 322
            ||||||||||||||||||||||
Sbjct: 2647 gccttccttcttcttccgtgcc 2626



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                              
Query: 355  gcttttcggggtctccggcggtgcagtccaacggatcaaggcccagttca 404
            ||||||||| ||||| |||||||||||||| |||||||| ||||||||||
Sbjct: 2602 gcttttcggagtctcaggcggtgcagtccatcggatcaatgcccagttca 2553



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                     
Query: 16   tgatggtattaacaaggaataaagt 40
            |||||||||||||||||||||||||
Sbjct: 2885 tgatggtattaacaaggaataaagt 2861



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 80   cccaacattggcaggtgaca 99
            ||||||||||||||||||||
Sbjct: 2825 cccaacattggcaggtgaca 2806



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>gb|AC119820.20| Mus musculus chromosome 1, clone RP23-148M18, complete sequence
          Length = 183287

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                            
Query: 209   tactaccactacaacttctactgctactact 239
             |||||||||||||||||||||||||||||||
Sbjct: 96038 tactaccactacaacttctactgctactact 96068



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>gb|AC158793.4| Mus musculus chromosome 1, clone RP23-269P13, complete sequence
          Length = 183447

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                             
Query: 209    tactaccactacaacttctactgctactact 239
              |||||||||||||||||||||||||||||||
Sbjct: 170397 tactaccactacaacttctactgctactact 170427



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>gb|AY110365.1| Zea mays CL38215_1 mRNA sequence
          Length = 607

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                               
Query: 11 atatctgatggtattaacaaggaataaagttacaggc 47
          |||| ||||||||||||||||| ||||||||||||||
Sbjct: 15 atatttgatggtattaacaaggcataaagttacaggc 51



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                     
Query: 363 gggtctccggcggtgcagtccaacggatcaaggcccagttca 404
           ||||||| || ||||| ||||| |||||||||||||||||||
Sbjct: 309 gggtctctggtggtgcggtccaccggatcaaggcccagttca 350



 Score = 44.1 bits (22), Expect = 0.35
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 251 aagagctcaaactcgatgtcgtctccgttcatccggaa 288
           |||||||| |||||||||||||| || |||| ||||||
Sbjct: 203 aagagctcgaactcgatgtcgtcaccattcagccggaa 240



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>emb|AL592077.8| Zebrafish DNA sequence from clone XX-DZ35C18, complete sequence
          Length = 53352

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                              
Query: 209   tactaccactacaacttctactgctactactgc 241
             |||||||||||| ||| ||||||||||||||||
Sbjct: 26824 tactaccactactactactactgctactactgc 26856



 Score = 44.1 bits (22), Expect = 0.35
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                   
Query: 209   tactaccactacaacttctactgctactactgccacca 246
             |||||| ||||| ||| |||||||||||||| ||||||
Sbjct: 27082 tactactactactactactactgctactactaccacca 27119



 Score = 44.1 bits (22), Expect = 0.35
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                   
Query: 209   tactaccactacaacttctactgctactactgccacca 246
             |||||| ||||| ||| |||||||||||||| ||||||
Sbjct: 26693 tactactactactactactactgctactactaccacca 26730



 Score = 44.1 bits (22), Expect = 0.35
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                               
Query: 213   accactacaacttctactgctactactgccacca 246
             |||||||| ||| |||||||||||||| ||||||
Sbjct: 26460 accactactactactactgctactactcccacca 26493



 Score = 44.1 bits (22), Expect = 0.35
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                   
Query: 209   tactaccactacaacttctactgctactactgccacca 246
             |||||| ||||| ||| |||||||||||||| ||||||
Sbjct: 26423 tactactactactactactactgctactactcccacca 26460



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>emb|BX321906.30| Zebrafish DNA sequence from clone DKEYP-45E9 in linkage group 10,
              complete sequence
          Length = 164266

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 212    taccactacaacttctactgctactact 239
              ||||||||||||| ||||||||||||||
Sbjct: 111322 taccactacaactactactgctactact 111349



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>emb|CR762485.16| Zebrafish DNA sequence from clone DKEY-269K12 in linkage group 19,
             complete sequence
          Length = 171225

 Score = 46.1 bits (23), Expect = 0.088
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 209   tactaccactacaacttctactgctactact 239
             |||||| ||||||||| ||||||||||||||
Sbjct: 83500 tactactactacaactactactgctactact 83470



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>gb|AC121612.2| Mus musculus BAC clone RP23-337A17 from 6, complete sequence
          Length = 209548

 Score = 46.1 bits (23), Expect = 0.088
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 209   tactaccactacaacttctactgctactact 239
             |||||| |||||| |||||||||||||||||
Sbjct: 14388 tactactactacatcttctactgctactact 14358



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>gb|AC157606.5| Mus musculus chromosome 7, clone RP23-466J2, complete sequence
          Length = 174676

 Score = 46.1 bits (23), Expect = 0.088
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 209   tactaccactacaacttctactgctactact 239
             |||||| ||||||||| ||||||||||||||
Sbjct: 62228 tactactactacaactactactgctactact 62198



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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 46.1 bits (23), Expect = 0.088
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                               
Query: 286      gaactcgaggcacttgccttccttcttcttc 316
                |||||| |||||||||||||| |||||||||
Sbjct: 17669271 gaactccaggcacttgccttctttcttcttc 17669301



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>emb|BX005350.6| Zebrafish DNA sequence from clone DKEY-58C8 in linkage group 1, complete
              sequence
          Length = 195436

 Score = 46.1 bits (23), Expect = 0.088
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                             
Query: 209    tactaccactacaacttctactgctactact 239
              |||||||||||||||| ||||| ||||||||
Sbjct: 117028 tactaccactacaactactactactactact 116998



 Score = 46.1 bits (23), Expect = 0.088
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                             
Query: 209    tactaccactacaacttctactgctactact 239
              |||||||||||||||| ||||| ||||||||
Sbjct: 116803 tactaccactacaactactactactactact 116773



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>emb|AL954657.14| Zebrafish DNA sequence from clone CH211-223E21 in linkage group 4,
             complete sequence
          Length = 200352

 Score = 46.1 bits (23), Expect = 0.088
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 209   tactaccactacaacttctactgctactact 239
             |||||||||||| ||||||||| ||||||||
Sbjct: 61548 tactaccactactacttctactactactact 61518



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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 46.1 bits (23), Expect = 0.088
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                               
Query: 286      gaactcgaggcacttgccttccttcttcttc 316
                |||||| |||||||||||||| |||||||||
Sbjct: 17623642 gaactccaggcacttgccttctttcttcttc 17623672



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>emb|AL935066.2|CNS08CCI Oryza sativa chromosome 12, . BAC OSJNBa0005P03 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 162200

 Score = 46.1 bits (23), Expect = 0.088
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                             
Query: 286    gaactcgaggcacttgccttccttcttcttc 316
              |||||| |||||||||||||| |||||||||
Sbjct: 161607 gaactccaggcacttgccttctttcttcttc 161637



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>emb|AL713909.5|CNS07YQ9 Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBa0073H17 of
              library OSJNBa from chromosome 12 of cultivar Nipponbare of
              ssp. japonica of Oryza sativa (rice), complete sequence
          Length = 113494

 Score = 46.1 bits (23), Expect = 0.088
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                             
Query: 286    gaactcgaggcacttgccttccttcttcttc 316
              |||||| |||||||||||||| |||||||||
Sbjct: 112082 gaactccaggcacttgccttctttcttcttc 112052



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>gb|AC135018.3| Mus musculus BAC clone RP23-124G8 from 6, complete sequence
          Length = 192911

 Score = 46.1 bits (23), Expect = 0.088
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                           
Query: 209  tactaccactacaacttctactgctactact 239
            |||||| |||||| |||||||||||||||||
Sbjct: 2798 tactactactacatcttctactgctactact 2828



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>ref|XM_637186.1| Dictyostelium discoideum hypothetical protein (DDB0218084), partial
            mRNA
          Length = 3669

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 209  tactaccactacaacttctactgctactac 238
            |||||||||||| ||| |||||||||||||
Sbjct: 1627 tactaccactaccactactactgctactac 1598



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>ref|XM_660666.1| Cryptosporidium hominis TU502 hypothetical protein (Chro.20329)
            partial mRNA
          Length = 4941

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                  
Query: 209  tactaccactacaacttctactgctactactgccacca 246
            |||||||||||| ||| ||||| |||||||| ||||||
Sbjct: 2589 tactaccactactactactactactactactaccacca 2626



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>emb|CR533571.9| Zebrafish DNA sequence from clone CH211-209O12 in linkage group 16,
             complete sequence
          Length = 218847

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 209   tactaccactacaacttctactgctactac 238
             |||||| ||||||||| |||||||||||||
Sbjct: 28498 tactactactacaactactactgctactac 28469



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>emb|BX649522.15| Zebrafish DNA sequence from clone DKEY-40I22 in linkage group 2, complete
              sequence
          Length = 155396

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 210    actaccactacaacttctactgctactact 239
              ||||| ||||||||||||||| ||||||||
Sbjct: 121510 actactactacaacttctactactactact 121481



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>emb|BX248234.13| Zebrafish DNA sequence from clone DKEY-13E15 in linkage group 16,
             complete sequence
          Length = 220538

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 209   tactaccactacaacttctactgctactac 238
             |||||| ||||||||| |||||||||||||
Sbjct: 51007 tactactactacaactactactgctactac 51036



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 209   tactaccactacaacttctactgctactactgccac 244
             |||||| ||||||||  ||||| |||||||||||||
Sbjct: 51327 tactactactacaacaactactactactactgccac 51362



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>emb|BX322566.6| Zebrafish DNA sequence from clone CH211-209B6 in linkage group 23,
              complete sequence
          Length = 203127

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 209    tactaccactacaacttctact 230
              ||||||||||||||||||||||
Sbjct: 112227 tactaccactacaacttctact 112206



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>emb|CR391931.7| Zebrafish DNA sequence from clone DKEY-267P8 in linkage group 23,
             complete sequence
          Length = 136484

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 209   tactaccactacaacttctactgctactac 238
             |||||| ||||||||||||||| |||||||
Sbjct: 81244 tactactactacaacttctactactactac 81215



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>gb|AC166101.4| Mus musculus BAC clone RP23-385P23 from chromosome 6, complete sequence
          Length = 223116

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 228    actgctactactgccaccatt 248
              |||||||||||||||||||||
Sbjct: 207351 actgctactactgccaccatt 207331



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>ref|XM_360388.1| Magnaporthe grisea 70-15 hypothetical protein (MG05762.4) partial
           mRNA
          Length = 2607

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 209 tactaccactacaacttctactgctactactgc 241
           |||||| ||||| ||| ||||||||||||||||
Sbjct: 939 tactactactactactactactgctactactgc 971



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>gb|AY528739.1| Trypanosoma cruzi chromosome-associated protein G mRNA, complete cds
          Length = 3243

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 209  tactaccactacaacttctactgctactactgc 241
            |||||||||||| ||| ||||| ||||||||||
Sbjct: 2070 tactaccactactactactactactactactgc 2102



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>gb|AC122399.4| Mus musculus BAC clone RP24-92B2 from chromosome 17, complete sequence
          Length = 184002

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 209   tactaccactacaacttctactgctactactgc 241
             |||||| ||||| ||| ||||||||||||||||
Sbjct: 10890 tactactactactactactactgctactactgc 10922



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>emb|CR936846.7| Zebrafish DNA sequence from clone DKEY-20N3 in linkage group 1,
             complete sequence
          Length = 80060

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 209   tactaccactacaacttctactgctactactgc 241
             |||||| ||||| ||| ||||||||||||||||
Sbjct: 43503 tactactactactactactactgctactactgc 43535



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 209   tactaccactacaacttctactgctactactgc 241
             |||||| ||||| ||| ||||||||||||||||
Sbjct: 43086 tactactactactactactactgctactactgc 43118



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 209   tactaccactacaacttctactgctactactgc 241
             |||||| ||||| ||| ||||||||||||||||
Sbjct: 42792 tactactactactactactactgctactactgc 42824



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>emb|BX897684.8| Zebrafish DNA sequence from clone CH211-107A4 in linkage group 7,
             complete sequence
          Length = 147920

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 211   ctaccactacaacttctactgctactact 239
             |||| ||||||||||||||| ||||||||
Sbjct: 54321 ctactactacaacttctactactactact 54349



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>gb|AC122429.3| Mus musculus BAC clone RP24-175I3 from chromosome 6, complete sequence
          Length = 188069

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 228   actgctactactgccaccatt 248
             |||||||||||||||||||||
Sbjct: 30909 actgctactactgccaccatt 30889



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>ref|XM_803756.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053506697.60) partial mRNA
          Length = 3243

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 209  tactaccactacaacttctactgctactactgc 241
            |||||||||||| ||| ||||| ||||||||||
Sbjct: 2070 tactaccactactactactactactactactgc 2102



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>emb|BX088589.14| Zebrafish DNA sequence from clone DKEY-27E7 in linkage group 12, complete
              sequence
          Length = 242558

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 209    tactaccactacaacttctactgctacta 237
              |||||||||||| ||||||||| ||||||
Sbjct: 234493 tactaccactactacttctacttctacta 234521



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>emb|BX901914.13| Zebrafish DNA sequence from clone DKEY-27F18 in linkage group 4,
             complete sequence
          Length = 149383

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 209   tactaccactacaacttctactgctacta 237
             |||||| ||||||||| ||||||||||||
Sbjct: 81577 tactactactacaactactactgctacta 81549



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>ref|XM_726040.1| Plasmodium yoelii yoelii str. 17XNL splicing factor (PY03158)
           partial mRNA
          Length = 1506

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 211 ctaccactacaacttctactgctactact 239
           |||||||||| |||||||||||| |||||
Sbjct: 992 ctaccactactacttctactgcttctact 964



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>emb|BX004862.9| Zebrafish DNA sequence from clone DKEY-200M9 in linkage group 4
             Contains the gene for a novel protein similar to
             vertebrate TAFA protein 5 (TAFA5) and a CpG island,
             complete sequence
          Length = 174359

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 209   tactaccactacaacttctactgctacta 237
             |||||| ||||||||| ||||||||||||
Sbjct: 26464 tactactactacaactactactgctacta 26492



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>gb|AC165428.1| Strongylocentrotus purpuratus BAC clone contig containing Eve, the hox
             cluster, cholinesterase, and COLP5alpha genes, complete
             sequence
          Length = 796348

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 209   tactaccactacaacttctactgctactactgc 241
             |||||| ||||| ||| ||||||||||||||||
Sbjct: 95560 tactactactactactactactgctactactgc 95592



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                  
Query: 209    tactaccactacaacttctactgctactactgccac 244
              |||||||||||| ||  ||||| |||||||||||||
Sbjct: 541952 tactaccactactaccactactactactactgccac 541917



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 215   cactacaacttctactgctactactgccacca 246
             |||||| ||| ||||| |||||||||||||||
Sbjct: 95144 cactactactactactactactactgccacca 95175



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>emb|CR392365.8| Zebrafish DNA sequence from clone DKEY-171P17 in linkage group 5,
              complete sequence
          Length = 168716

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                               
Query: 207    cgtactaccactacaacttctactgctactact 239
              |||||||||||||| ||| ||||| ||||||||
Sbjct: 116862 cgtactaccactactactactactactactact 116894



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>gb|AC127460.2| Homo sapiens chromosome 5 clone RP11-689B23, complete sequence
          Length = 115293

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 209   tactaccactacaacttctactgctacta 237
             |||||||||||| ||| ||||||||||||
Sbjct: 60307 tactaccactaccactactactgctacta 60279



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>gb|AC113390.3| Homo sapiens chromosome 5 clone RP11-360C3, complete sequence
          Length = 196545

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 209    tactaccactacaacttctactgctacta 237
              |||||||||||| ||| ||||||||||||
Sbjct: 179677 tactaccactaccactactactgctacta 179705



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>emb|AL606494.4| Mouse DNA sequence from clone RP23-198B6 on chromosome 2, complete
             sequence
          Length = 196744

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 226   ctactgctactactgccacca 246
             |||||||||||||||||||||
Sbjct: 54716 ctactgctactactgccacca 54696



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>emb|BX649457.15| Zebrafish DNA sequence from clone DKEYP-87E7 in linkage group 22,
             complete sequence
          Length = 159207

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 209   tactaccactacaacttctactgctacta 237
             |||||| ||||||||| ||||||||||||
Sbjct: 29422 tactactactacaactactactgctacta 29394



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>emb|BX649545.14| Zebrafish DNA sequence from clone CH211-9N13 in linkage group 19,
             complete sequence
          Length = 169802

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 211   ctaccactacaacttctactgctactact 239
             |||| ||||||||| ||||||||||||||
Sbjct: 38205 ctactactacaactactactgctactact 38177



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>emb|BX890573.6| Zebrafish DNA sequence from clone DKEYP-90F5 in linkage group 20,
             complete sequence
          Length = 86820

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 209   tactaccactacaacttctactgctacta 237
             |||||| ||||||||||||||| ||||||
Sbjct: 74311 tactactactacaacttctacttctacta 74283



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>gb|AC151411.2| Mus musculus BAC clone RP24-363M23 from 17, complete sequence
          Length = 173264

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                               
Query: 209    tactaccactacaacttctactgctactactgc 241
              |||||| ||||| ||| ||||||||||||||||
Sbjct: 170866 tactactactactactactactgctactactgc 170898



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>gb|DQ079274.1| Drosophila mojavensis strain 15081-1351.03 Acp27a (Acp27a) gene,
           complete cds
          Length = 355

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 209 tactaccactacaacttctactgctactactgc 241
           |||||||||||| ||| ||||| ||||||||||
Sbjct: 124 tactaccactactactactactactactactgc 156



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>ref|XM_642722.1| Dictyostelium discoideum armadillo repeat-containing protein
            (DDB0230124), partial mRNA
          Length = 5811

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 209  tactaccactacaacttctactgctact 236
            |||||||||||| ||| |||||||||||
Sbjct: 3826 tactaccactaccactgctactgctact 3799



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>ref|XM_637453.1| Dictyostelium discoideum hypothetical protein (DDB0217996), partial
           mRNA
          Length = 2001

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 216 actacaacttctactgctactact 239
           ||||||||||||||| ||||||||
Sbjct: 486 actacaacttctactactactact 463



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>gb|AC169504.1| Mus musculus BAC clone RP23-416K3 from chromosome 17, complete sequence
          Length = 215554

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 208   gtactaccactacaacttctactgctactact 239
             ||||||| ||||| ||| ||||||||||||||
Sbjct: 28788 gtactactactactactgctactgctactact 28819



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>ref|NM_193725.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 960

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 210 actaccactacaacttctactgctactactgc 241
           ||||||||| | ||||| ||||||||||||||
Sbjct: 888 actaccactcccacttccactgctactactgc 857



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>gb|AC148451.2| Xenopus tropicalis clone CH216-143G2, complete sequence
          Length = 151696

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 222   acttctactgctactactgc 241
             ||||||||||||||||||||
Sbjct: 97711 acttctactgctactactgc 97692



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>gb|AY022494.1| Oryza sativa microsatellite MRG4819 containing (AGT)X12, closest to
           marker R518, genomic sequence
          Length = 236

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 209 tactaccactacaacttctactgctactactg 240
           |||||| ||||| ||| |||||||||||||||
Sbjct: 122 tactactactactactactactgctactactg 91



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>gb|AC144709.2| Danio rerio clone CH211-204P11, complete sequence
          Length = 157229

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 209  tactaccactacaacttctactgctactactg 240
            |||||||||||| ||| ||||| |||||||||
Sbjct: 5143 tactaccactactactactactactactactg 5174



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>gb|DQ481664.1| Takifugu rubripes HoxAb gene cluster, complete sequence
          Length = 163052

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 209   tactaccactacaacttctactgctactactgccac 244
             |||||||||||| ||| ||||| |||||||| ||||
Sbjct: 57442 tactaccactactactactactactactactaccac 57407



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                               
Query: 209     tactaccactacaacttctactgctactactg 240
               |||||| ||||| ||| |||||||||||||||
Sbjct: 4268175 tactactactactactactactgctactactg 4268206



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>gb|AC115579.3| Dictyostelium discoideum chromosome 2 map 6097680-6105897 strain AX4,
            complete sequence
          Length = 8211

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 216  actacaacttctactgctactact 239
            ||||||||||||||| ||||||||
Sbjct: 2494 actacaacttctactactactact 2471



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>gb|AC161448.4| Mus musculus BAC clone RP24-149K9 from chromosome 6, complete sequence
          Length = 190414

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 208    gtactaccactacaacttctactgctactact 239
              ||||||| ||||| ||| ||||||||||||||
Sbjct: 152086 gtactactactactactactactgctactact 152117



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>emb|Z75747.2|HSU96H1 Human DNA sequence from clone LL0XNC01-96H1 on chromosome X, complete
            sequence
          Length = 39055

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 226  ctactgctactactgccaccatta 249
            |||||||||||||| |||||||||
Sbjct: 9431 ctactgctactactaccaccatta 9454



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>emb|AL928717.5| Human DNA sequence from clone RP11-363G10 on chromosome X Contains the
              gene for family D 4 melanoma antigen (MAGED4) (KIAA1859,
              DKFZp761N1924, FLJ37222, FLJ25964), gene LOC349420
              (FLJ39060) and a CpG island, complete sequence
          Length = 186278

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 209    tactaccactacaacttctactgctactactg 240
              |||||| ||||| ||| |||||||||||||||
Sbjct: 134749 tactactactactactactactgctactactg 134718



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>emb|BX538353.1| Cryptosporidium parvum chromosome 6, complete sequence; segment 4/4
          Length = 277703

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                  
Query: 209    tactaccactacaacttctactgctactactgccac 244
              |||||||||||| ||| ||||| |||||||| ||||
Sbjct: 250458 tactaccactactactactactactactactaccac 250423



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>emb|BX511087.12| Zebrafish DNA sequence from clone DKEY-261O7 in linkage group 17,
             complete sequence
          Length = 184012

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 210   actaccactacaacttctactgctactactgc 241
             ||||| || |||||| ||||||||||||||||
Sbjct: 42389 actactacaacaactactactgctactactgc 42358



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>emb|BX897736.7| Zebrafish DNA sequence from clone CH211-181B15 in linkage group 17,
             complete sequence
          Length = 141987

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 209   tactaccactacaacttctactgctactactgccac 244
             |||||||||||||||| ||||| |||| ||| ||||
Sbjct: 65016 tactaccactacaactactacttctaccactaccac 64981



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>gb|AC087336.5| Mus musculus chromosome 6, clone RP23-446O7, complete sequence
          Length = 181773

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 208   gtactaccactacaacttctactgctactact 239
             ||||||| ||||| ||| ||||||||||||||
Sbjct: 30652 gtactactactactactactactgctactact 30683



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>emb|BX323831.7| Zebrafish DNA sequence from clone CH211-12E7 in linkage group 23,
              complete sequence
          Length = 180638

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 216    actacaacttctactgctactact 239
              ||||| ||||||||||||||||||
Sbjct: 109004 actactacttctactgctactact 109027



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>ref|XM_627858.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd6_5400),
            partial mRNA
          Length = 2004

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                
Query: 209  tactaccactacaacttctactgctactactgccac 244
            |||||||||||| ||| ||||| |||||||| ||||
Sbjct: 1665 tactaccactactactactactactactactaccac 1700



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>ref|XM_626655.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd3_720), partial
             mRNA
          Length = 35091

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 209   tactaccactacaacttctactgctactactgccac 244
             |||||||||||| ||| ||||| |||||||| ||||
Sbjct: 12414 tactaccactactactactactactactactaccac 12449



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>emb|BX572622.13| Zebrafish DNA sequence from clone CH211-150O20 in linkage group 19,
              complete sequence
          Length = 188940

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 209    tactaccactacaacttctactgctactactg 240
              |||||||||||| ||| ||||| |||||||||
Sbjct: 119546 tactaccactactactactactactactactg 119515



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>dbj|AK053474.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched
            library, clone:E130020H04 product:unclassifiable, full
            insert sequence
          Length = 3401

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                
Query: 209  tactaccactacaacttctactgctactactgccac 244
            |||||| ||||| ||| ||||| |||||||||||||
Sbjct: 2980 tactactactactactactactactactactgccac 3015



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>gb|AF225480.1|AF225480 Eustenogaster fraterna clone EF131CAT microsatellite sequence
          Length = 140

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 222 acttctactgctactactgc 241
           ||||||||||||||||||||
Sbjct: 46  acttctactgctactactgc 65



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                               
Query: 209     tactaccactacaacttctactgctactactg 240
               |||||| ||||| ||| |||||||||||||||
Sbjct: 4268290 tactactactactactactactgctactactg 4268321



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 210      actaccactacaacttctactgctactactgc 241
                ||||||||| | ||||| ||||||||||||||
Sbjct: 17709068 actaccactcccacttccactgctactactgc 17709037



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>emb|BX511264.7| Zebrafish DNA sequence from clone DKEY-31O6 in linkage group 21,
             complete sequence
          Length = 145605

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 219   acaacttctactgctactactgccacca 246
             ||||| ||||||||||||||| ||||||
Sbjct: 81205 acaacatctactgctactactaccacca 81178



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>gb|AC092155.3| Homo sapiens BAC clone RP11-312H10 from 2, complete sequence
          Length = 153304

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 222    acttctactgctactactgc 241
              ||||||||||||||||||||
Sbjct: 127536 acttctactgctactactgc 127555



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>gb|AC112482.4| Homo sapiens 3 BAC RP11-305F5 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 182916

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 228   actgctactactgccaccat 247
             ||||||||||||||||||||
Sbjct: 88334 actgctactactgccaccat 88353



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>gb|AC104763.12| Homo sapiens chromosome 17, clone RP11-3K24, complete sequence
          Length = 163418

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 226   ctactgctactactgccaccatta 249
             |||||||||||||| |||||||||
Sbjct: 69516 ctactgctactactaccaccatta 69539



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>dbj|AP003217.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0094H06
          Length = 147245

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 210   actaccactacaacttctactgctactactgc 241
             ||||||||| | ||||| ||||||||||||||
Sbjct: 90603 actaccactcccacttccactgctactactgc 90572



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>emb|AL672015.7| Mouse DNA sequence from clone RP23-154O12 on chromosome X, complete
              sequence
          Length = 194287

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                  
Query: 209    tactaccactacaacttctactgctactactgccac 244
              |||||| ||||| ||| ||||| |||||||||||||
Sbjct: 108535 tactactactactactactactactactactgccac 108570



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>dbj|AK102891.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033112M22, full
           insert sequence
          Length = 1392

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 210 actaccactacaacttctactgctactactgc 241
           ||||||||| | ||||| ||||||||||||||
Sbjct: 974 actaccactcccacttccactgctactactgc 943



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>dbj|AK059119.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-E12, full
           insert sequence
          Length = 1367

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 210 actaccactacaacttctactgctactactgc 241
           ||||||||| | ||||| ||||||||||||||
Sbjct: 974 actaccactcccacttccactgctactactgc 943



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>gb|AY107374.1| Zea mays PCO088426 mRNA sequence
          Length = 436

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 286 gaactcgaggcacttgccttccttcttc 313
           |||||| |||||||||||||| ||||||
Sbjct: 285 gaactccaggcacttgccttctttcttc 312



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>gb|U31017.1|HSU31017 Hordeum spontaneum CHC 21051 5S rRNA genes, clone HSPO005, partial
           sequence
          Length = 292

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 208 gtactaccactacaacttctactgctactact 239
           ||||||||||||| ||| ||||| ||||||||
Sbjct: 221 gtactaccactactactactactactactact 190



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>gb|AC126223.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0076N15, complete sequence
          Length = 134307

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 209   tactaccactacaacttctactgctactactg 240
             |||||| ||||| ||| |||||||||||||||
Sbjct: 96790 tactactactactactactactgctactactg 96821



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>gb|U26721.1|DVU26721 Drosophila virilis sodium channel protein (para) gene, exons 5,6,7,
           and 8, partial cds
          Length = 1890

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 209 tactaccactacaacttctactgctactactgccac 244
           |||||| ||||| ||| |||||||||||||| ||||
Sbjct: 333 tactactactactactactactgctactactaccac 368



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>emb|AL731678.17| Mouse DNA sequence from clone RP23-39H12 on chromosome X, complete
              sequence
          Length = 230186

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                  
Query: 209    tactaccactacaacttctactgctactactgccac 244
              |||||| ||||| ||| ||||| |||||||||||||
Sbjct: 133183 tactactactactactactactactactactgccac 133218


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,913,234
Number of Sequences: 3902068
Number of extensions: 2913234
Number of successful extensions: 66265
Number of sequences better than 10.0: 83
Number of HSP's better than 10.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 65860
Number of HSP's gapped (non-prelim): 404
length of query: 404
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 382
effective length of database: 17,147,199,772
effective search space: 6550230312904
effective search space used: 6550230312904
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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