>1B78_HUMAN (P30498) HLA class I histocompatibility antigen, B-78 alpha chain|
           precursor (MHC class I antigen B*78)
          Length = 362

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 18/56 (32%), Positives = 27/56 (48%)
 Frame = +1

Query: 112 RGDAIAAQLKTEPRCYWVGQNTSEATSKGLPVEAIAPATKTDRSKMLSGRPKYFRS 279
           R D+ AA  +TEPR  W+ Q   E   +    +     T+TDR  + + R  Y +S
Sbjct: 59  RFDSDAASPRTEPRAPWIEQEGPEYWDRN--TQIFKTNTQTDRESLRNLRGYYNQS 112

>RS2_MYCPA (Q73VQ7) 30S ribosomal protein S2|
          Length = 276

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 16/46 (34%), Positives = 20/46 (43%)
 Frame = +1

Query: 106 ITRGDAIAAQLKTEPRCYWVGQNTSEATSKGLPVEAIAPATKTDRS 243
           + RGD        EP   W  +  + AT+   P EA AP   TD S
Sbjct: 231 VGRGDGKPEVEAAEPLAEWEQELLASATATAAPTEAGAPEPTTDPS 276

>AIPL1_RAT (Q9JLG9) Aryl-hydrocarbon-interacting protein-like 1|
          Length = 328

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
 Frame = +1

Query: 1   T*HTLIY----KDLKVVAQGPDATTTHKHSRQICS*QLYITRGDAIAAQLKTEPR 153
           T HT +Y    + L+ VA+G D T+ H H+  + +   Y T G     +L+ EP+
Sbjct: 91  TIHTGVYPMLSRSLRQVAEGKDPTSWHVHTCGLANMFAYHTLGYEDLDELQKEPQ 145

>AIPL1_MOUSE (Q924K1) Aryl-hydrocarbon-interacting protein-like 1|
          Length = 328

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
 Frame = +1

Query: 1   T*HTLIY----KDLKVVAQGPDATTTHKHSRQICS*QLYITRGDAIAAQLKTEPR 153
           T HT +Y    + L+ VA+G D T+ H H+  + +   Y T G     +L+ EP+
Sbjct: 91  TIHTGVYPMLSRSLRQVAEGKDPTSWHVHTCGLANMFAYHTLGYEDLDELQKEPQ 145

>AIPL1_SAIBB (Q95MN7) Aryl-hydrocarbon-interacting protein-like 1|
          Length = 372

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
 Frame = +1

Query: 1   T*HTLIY----KDLKVVAQGPDATTTHKHSRQICS*QLYITRGDAIAAQLKTEPR 153
           T HT +Y    + L+ +AQG D T  H H+  + +   Y T G     +L+ EP+
Sbjct: 91  TIHTGVYPILSRSLRQMAQGKDPTEWHVHTCGLANMFAYHTLGYEDLDELQKEPQ 145

>AIPL1_PAPCY (Q95MN8) Aryl-hydrocarbon-interacting protein-like 1|
          Length = 372

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
 Frame = +1

Query: 1   T*HTLIY----KDLKVVAQGPDATTTHKHSRQICS*QLYITRGDAIAAQLKTEPR 153
           T HT +Y    + L+ +AQG D T  H H+  + +   Y T G     +L+ EP+
Sbjct: 91  TIHTGVYPILSRSLRQMAQGKDPTEWHVHTCGLANMFAYHTLGYEDLDELQKEPQ 145

>AIPL1_PANPA (Q95MN9) Aryl-hydrocarbon-interacting protein-like 1|
          Length = 384

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
 Frame = +1

Query: 1   T*HTLIY----KDLKVVAQGPDATTTHKHSRQICS*QLYITRGDAIAAQLKTEPR 153
           T HT +Y    + L+ +AQG D T  H H+  + +   Y T G     +L+ EP+
Sbjct: 91  TIHTGVYPILSRSLRQMAQGKDPTEWHVHTCGLANMFAYHTLGYEDLDELQKEPQ 145

>AIPL1_HUMAN (Q9NZN9) Aryl-hydrocarbon-interacting protein-like 1|
          Length = 384

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
 Frame = +1

Query: 1   T*HTLIY----KDLKVVAQGPDATTTHKHSRQICS*QLYITRGDAIAAQLKTEPR 153
           T HT +Y    + L+ +AQG D T  H H+  + +   Y T G     +L+ EP+
Sbjct: 91  TIHTGVYPILSRSLRQMAQGKDPTEWHVHTCGLANMFAYHTLGYEDLDELQKEPQ 145

>AIPL1_MACMU (Q95MP0) Aryl-hydrocarbon-interacting protein-like 1|
          Length = 392

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
 Frame = +1

Query: 1   T*HTLIY----KDLKVVAQGPDATTTHKHSRQICS*QLYITRGDAIAAQLKTEPR 153
           T HT +Y    + L+ +AQG D T  H H+  + +   Y T G     +L+ EP+
Sbjct: 91  TIHTGVYPILSRSLRQMAQGKDPTEWHVHTCGLANMFAYHTLGYEDLDELQKEPQ 145


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,062,737
Number of Sequences: 219361
Number of extensions: 798792
Number of successful extensions: 2118
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2094
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2118
length of database: 80,573,946
effective HSP length: 76
effective length of database: 63,902,510
effective search space used: 1533660240
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)