>emb|BX640452.1| Bordetella bronchiseptica strain RB50, complete genome; segment 16/16
          Length = 123385

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 112   cgtggcgatgccatcgccgcgc 133
             ||||||||||||||||||||||
Sbjct: 68299 cgtggcgatgccatcgccgcgc 68278

>emb|BX640436.1| Bordetella parapertussis strain 12822, complete genome; segment 14/14
          Length = 255260

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 112    cgtggcgatgccatcgccgcgc 133
              ||||||||||||||||||||||
Sbjct: 204127 cgtggcgatgccatcgccgcgc 204106

>emb|BX640412.1| Bordetella pertussis strain Tohama I, complete genome; segment 2/12
          Length = 348171

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 112    cgtggcgatgccatcgccgcgc 133
              ||||||||||||||||||||||
Sbjct: 130254 cgtggcgatgccatcgccgcgc 130233

>gb|AC145780.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0069P02
             map near S13580, complete sequence
          Length = 88044

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 86    tttgttcttaacaactatac 105
             ||||||||||||||||||||
Sbjct: 50110 tttgttcttaacaactatac 50091

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 86       tttgttcttaacaactatac 105
                ||||||||||||||||||||
Sbjct: 24045561 tttgttcttaacaactatac 24045580

>emb|CR391920.11| Zebrafish DNA sequence from clone CH211-213B7 in linkage group 16,
              complete sequence
          Length = 199710

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 63     cacacacaaacacagcaggc 82
              ||||||||||||||||||||
Sbjct: 176737 cacacacaaacacagcaggc 176756

>emb|AL357515.26| Human DNA sequence from clone RP11-397G5 on chromosome 6 Contains the 3'
              end of the AMD1 gene for S-adenosylmethionine decarboxylase
              1, two novel genes, a glutathione S-transferase M2 (muscle)
              (GSTM2) pseudogene and three CpG islands, complete sequence
          Length = 190440

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 63     cacacacaaacacagcaggcagat 86
              |||||||| |||||||||||||||
Sbjct: 161967 cacacacacacacagcaggcagat 161990

>emb|AL138767.15| Human DNA sequence from clone RP11-57C13 on chromosome 10 Contains
            the 3' end of the MINPP gene for multiple inositol
            polyphosphate histidine phosphatase 1, three novel genes,
            a ribosomal protein S26 (RPS26) pseudogene, the 5' end of
            the PAPSS2 gene for 3'-phosphoadenosine 5'-phosphosulfate
            synthase 2 and a CpG island, complete sequence
          Length = 111645

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 63   cacacacaaacacagcaggcagat 86
            ||||||||||||||||| ||||||
Sbjct: 1287 cacacacaaacacagcaagcagat 1264

>emb|Z50152.1|DMTRXIII D.melanogaster DNA for trxI and trxII genes
          Length = 26618

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 63    cacacacaaacacagcaggcagat 86
             |||||||| |||||||||||||||
Sbjct: 26430 cacacacacacacagcaggcagat 26453

>emb|Z31725.1|DMTTHORAX D.melanogaster DNA for (putative) trithorax protein
          Length = 14546

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 63    cacacacaaacacagcaggcagat 86
             |||||||| |||||||||||||||
Sbjct: 14358 cacacacacacacagcaggcagat 14381

>emb|AL646101.7| Mouse DNA sequence from clone RP23-145E14 on chromosome 11, complete
             sequence
          Length = 169742

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 55    gccactaccacacacaaacacagc 78
             ||||| ||||||||||||||||||
Sbjct: 27762 gccacaaccacacacaaacacagc 27785

>ref|NM_134282.1| Drosophila melanogaster trithorax CG8651-RA, transcript variant A
             (trx), mRNA
          Length = 14050

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 63    cacacacaaacacagcaggcagat 86
             |||||||| |||||||||||||||
Sbjct: 13862 cacacacacacacagcaggcagat 13885

>ref|NM_134281.1| Drosophila melanogaster trithorax CG8651-RC, transcript variant C
             (trx), mRNA
          Length = 12364

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 63    cacacacaaacacagcaggcagat 86
             |||||||| |||||||||||||||
Sbjct: 12176 cacacacacacacagcaggcagat 12199

>ref|NM_057422.2| Drosophila melanogaster trithorax CG8651-RB, transcript variant B
             (trx), mRNA
          Length = 12813

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 63    cacacacaaacacagcaggcagat 86
             |||||||| |||||||||||||||
Sbjct: 12625 cacacacacacacagcaggcagat 12648

>ref|NM_057421.2| Drosophila melanogaster trithorax CG8651-RD, transcript variant D
             (trx), mRNA
          Length = 13601

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 63    cacacacaaacacagcaggcagat 86
             |||||||| |||||||||||||||
Sbjct: 13413 cacacacacacacagcaggcagat 13436

>ref|XM_682652.1| PREDICTED: Danio rerio similar to MAGUK family factor (LOC559318),
            mRNA
          Length = 1905

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 69   caaacacagcaggcagattt 88
            ||||||||||||||||||||
Sbjct: 1584 caaacacagcaggcagattt 1565

>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 115    ggcgatgccatcgccgcgca 134
              ||||||||||||||||||||
Sbjct: 636772 ggcgatgccatcgccgcgca 636791

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 86       tttgttcttaacaactatac 105
                ||||||||||||||||||||
Sbjct: 23958750 tttgttcttaacaactatac 23958769

>gb|AC007904.6|AC007904 Drosophila melanogaster, chromosome 3R, region 88B-88B, BAC clone
              BACR01H04, complete sequence
          Length = 190325

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 63     cacacacaaacacagcaggcagat 86
              |||||||| |||||||||||||||
Sbjct: 143720 cacacacacacacagcaggcagat 143697

>gb|AC137695.3| Homo sapiens 3 BAC RP13-685P2 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 138278

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 60     taccacacacaaacacagca 79
              ||||||||||||||||||||
Sbjct: 126474 taccacacacaaacacagca 126455

>emb|BX678775.3| Mouse DNA sequence from clone RP24-82E8 on chromosome 11, complete
             sequence
          Length = 65735

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 21    taaagacttgaaagtagtag 40
             ||||||||||||||||||||
Sbjct: 26571 taaagacttgaaagtagtag 26552

>emb|AL928824.13| Zebrafish DNA sequence from clone CH211-105D18 in linkage group 6,
             complete sequence
          Length = 189742

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 69    caaacacagcaggcagattt 88
             ||||||||||||||||||||
Sbjct: 57952 caaacacagcaggcagattt 57933

>emb|BX855618.7| Zebrafish DNA sequence from clone CH211-69H5 in linkage group 4,
             complete sequence
          Length = 127818

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 63    cacacacaaacacagcaggc 82
             ||||||||||||||||||||
Sbjct: 50664 cacacacaaacacagcaggc 50645

>gb|AE003704.3| Drosophila melanogaster chromosome 3R, section 42 of 118 of the
            complete sequence
          Length = 220679

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 63   cacacacaaacacagcaggcagat 86
            |||||||| |||||||||||||||
Sbjct: 3453 cacacacacacacagcaggcagat 3430

>emb|CT030177.6| M.truncatula DNA sequence from clone MTH2-154J16 on chromosome 3,
             complete sequence
          Length = 126881

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 92    cttaacaactatacataaca 111
             ||||||||||||||||||||
Sbjct: 11975 cttaacaactatacataaca 11994


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,420,852
Number of Sequences: 3902068
Number of extensions: 2420852
Number of successful extensions: 114177
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 114102
Number of HSP's gapped (non-prelim): 75
length of query: 304
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 282
effective length of database: 17,147,199,772
effective search space: 4835510335704
effective search space used: 4835510335704
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)