Clone Name | rbastl27b10 |
---|---|
Clone Library Name | barley_pub |
>gb|AE017263.1| Mesoplasma florum L1 complete genome Length = 793224 Score = 42.1 bits (21), Expect = 0.94 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 aattaacaaacgatcaaaaca 36 ||||||||||||||||||||| Sbjct: 2383 aattaacaaacgatcaaaaca 2403
>gb|AC163338.5| Mus musculus BAC clone RP24-574A13 from chromosome 13, complete sequence Length = 149507 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 ttttcattgactgaagagca 75 |||||||||||||||||||| Sbjct: 7119 ttttcattgactgaagagca 7138
>gb|AC104645.8| Homo sapiens chromosome 3 clone CTD-2011M13, complete sequence Length = 153595 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 caatgatttccctctcacat 208 |||||||||||||||||||| Sbjct: 89092 caatgatttccctctcacat 89073
>ref|XM_755998.1| Ustilago maydis 521 hypothetical protein (UM04944.1) partial mRNA Length = 4794 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 cagcacaacacgctcgcttg 93 |||||||||||||||||||| Sbjct: 3152 cagcacaacacgctcgcttg 3133
>ref|XM_724386.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY01684) partial mRNA Length = 2322 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 aaattaacaaacgatcaaaa 34 |||||||||||||||||||| Sbjct: 1510 aaattaacaaacgatcaaaa 1529
>ref|XM_675227.1| Plasmodium berghei strain ANKA hypothetical protein (PB001205.00.0) partial mRNA Length = 333 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 caaattaacaaacgatcaaa 33 |||||||||||||||||||| Sbjct: 27 caaattaacaaacgatcaaa 46
>gb|AC164426.5| Mus musculus BAC clone RP24-320I19 from chromosome 13, complete sequence Length = 160268 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 ttttcattgactgaagagca 75 |||||||||||||||||||| Sbjct: 47250 ttttcattgactgaagagca 47231
>dbj|AK052044.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length enriched library, clone:D230039H11 product:unclassifiable, full insert sequence Length = 3938 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 ttttcattgactgaagagca 75 |||||||||||||||||||| Sbjct: 2860 ttttcattgactgaagagca 2879 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,034,914 Number of Sequences: 3902068 Number of extensions: 2034914 Number of successful extensions: 33795 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 33783 Number of HSP's gapped (non-prelim): 12 length of query: 285 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 263 effective length of database: 17,147,199,772 effective search space: 4509713540036 effective search space used: 4509713540036 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)