>gb|AY107344.1| Zea mays PCO141849 mRNA sequence
          Length = 700

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 30/30 (100%)
 Strand = Plus / Minus

                                         
Query: 314 ttactgcctatccaagaacatgtaatcagc 343
           ||||||||||||||||||||||||||||||
Sbjct: 642 ttactgcctatccaagaacatgtaatcagc 613

>gb|AC132491.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0599F04,
             complete sequence
          Length = 169073

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                       
Query: 315   tactgcctatccaagaacatgtaatc 340
             ||||||||||||||||||||||||||
Sbjct: 37659 tactgcctatccaagaacatgtaatc 37634

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                          
Query: 315      tactgcctatccaagaacatgtaatc 340
                ||||||||||||||||||||||||||
Sbjct: 25521252 tactgcctatccaagaacatgtaatc 25521227

>dbj|AK067066.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013093P17, full
            insert sequence
          Length = 2792

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                      
Query: 315  tactgcctatccaagaacatgtaatc 340
            ||||||||||||||||||||||||||
Sbjct: 2255 tactgcctatccaagaacatgtaatc 2230

>gb|AC129162.5| Rattus norvegicus 9 BAC CH230-108L13 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 245677

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 294    gtagagaaaagaaacttggcttact 318
              |||||||||||||||| ||||||||
Sbjct: 150400 gtagagaaaagaaactgggcttact 150376

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 159      aattatactttgtacaggatt 179
                |||||||||||||||||||||
Sbjct: 31135475 aattatactttgtacaggatt 31135455

>gb|AC084282.6| Oryza sativa chromosome 3 BAC OSJNBb0048A17 genomic sequence, complete
             sequence
          Length = 128017

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 159   aattatactttgtacaggatt 179
             |||||||||||||||||||||
Sbjct: 56116 aattatactttgtacaggatt 56096

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 159      aattatactttgtacaggatt 179
                |||||||||||||||||||||
Sbjct: 31225998 aattatactttgtacaggatt 31225978

>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 260     cttctccggtgggccgccgggccgg 284
               ||||||||||| |||||||||||||
Sbjct: 4294497 cttctccggtgcgccgccgggccgg 4294521

>gb|AF031734.1|AF031734 Peromyscus leucopus strain pl3455ia mitochondrial D-loop region,
          partial sequence, and tRNA-Phe gene, partial sequence,
          mitochondrial gene encoding mitochondrial RNA
          Length = 333

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 14 accgtcaatactgagattaat 34
          |||||||||||||||||||||
Sbjct: 23 accgtcaatactgagattaat 43

>gb|AC159189.2| Mus musculus BAC clone RP24-159L17 from chromosome 6, complete sequence
          Length = 160884

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 23    actgagattaatcatcacaat 43
             |||||||||||||||||||||
Sbjct: 95577 actgagattaatcatcacaat 95597

>gb|AC183103.2| Pan troglodytes BAC clone CH251-712L4 from chromosome 3, complete
              sequence
          Length = 191366

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 350    gccaggctggaggccagcgg 369
              ||||||||||||||||||||
Sbjct: 170925 gccaggctggaggccagcgg 170944

>gb|AC125478.14| Medicago truncatula clone mth2-31i19, complete sequence
          Length = 111256

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 57    caatttcatctaagacaaaa 76
             ||||||||||||||||||||
Sbjct: 48737 caatttcatctaagacaaaa 48718

>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 350     gccaggctggaggccagcgg 369
               ||||||||||||||||||||
Sbjct: 1112686 gccaggctggaggccagcgg 1112667

>emb|AL663015.5|OSJN00213 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0068N06,
             complete sequence
          Length = 172895

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 42    atgataaatatccatcaatt 61
             ||||||||||||||||||||
Sbjct: 85241 atgataaatatccatcaatt 85260

>gb|AC117422.5| Homo sapiens 3 BAC RP11-158I23 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 31686

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 350   gccaggctggaggccagcgg 369
             ||||||||||||||||||||
Sbjct: 21347 gccaggctggaggccagcgg 21328

>gb|AC090433.10| Chlamydomonas reinhardtii clone cr-19b23, complete sequence
          Length = 118183

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 196   cggccagacagccacggcgg 215
             ||||||||||||||||||||
Sbjct: 48900 cggccagacagccacggcgg 48881

>gb|AF327876.1|AF327876 Chlamydomonas reinhardtii PF6 protein gene, promoter and complete cds
          Length = 11462

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 340  cagcggcggcgccaggctgg 359
            ||||||||||||||||||||
Sbjct: 6587 cagcggcggcgccaggctgg 6568

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 42       atgataaatatccatcaatt 61
                ||||||||||||||||||||
Sbjct: 12936982 atgataaatatccatcaatt 12937001

>gb|AC102839.24| Mus musculus chromosome 5, clone RP24-343D8, complete sequence
          Length = 196090

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 23     actgagattaatcatcacaa 42
              ||||||||||||||||||||
Sbjct: 171732 actgagattaatcatcacaa 171713

>gb|AC105335.27| Mus musculus chromosome 5, clone RP23-377H14, complete sequence
          Length = 171789

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 23     actgagattaatcatcacaa 42
              ||||||||||||||||||||
Sbjct: 126480 actgagattaatcatcacaa 126499


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,224,500
Number of Sequences: 3902068
Number of extensions: 4224500
Number of successful extensions: 71416
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 71125
Number of HSP's gapped (non-prelim): 291
length of query: 390
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 368
effective length of database: 17,147,199,772
effective search space: 6310169516096
effective search space used: 6310169516096
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)