>YD72_SCHPO (Q10327) Hypothetical protein C32A11.02c in chromosome I|
          Length = 851

 Score = 32.3 bits (72), Expect = 0.61
 Identities = 11/47 (23%), Positives = 26/47 (55%)
 Frame = -1

Query: 425 EHPADEAINRAESLLEKLKSFAGEMKVRSSHALERVMQYVRSLISSL 285
           +HP    +N  +  ++KL   +G +   ++   +R MQY++ L+ ++
Sbjct: 247 QHPVRSLLNLIDKFIDKLSEQSGNVTADTNEHYDRAMQYLKQLVENI 293

>Y4628_STRCO (Q04296) Putative HTH-type transcriptional regulator SCO4628|
          Length = 269

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
 Frame = -3

Query: 330 PGESNAVCEVLDLKPEG-GSGARVRRSWGCCSLKGKEAVIRSEGVGFKRRGQVEE-GSGG 157
           PGE   + ++ DL   G GS   V R++     +G  A+ R  G   +R+  ++  G G 
Sbjct: 26  PGEQ--LPQIRDLVEAGEGSKETVHRAYKALETEGLVAMSRGHGTVVRRKAPLKRLGIGR 83

Query: 156 LQR---RPGEVCAQIQDRLAAGR 97
             +   R G+  A I DR+A+GR
Sbjct: 84  YDKAKWRDGDEVAFIADRVASGR 106

>FYN_XIPHE (P27446) Proto-oncogene tyrosine-protein kinase FYN (EC 2.7.10.2)|
           (P59-FYN)
          Length = 536

 Score = 29.6 bits (65), Expect = 3.9
 Identities = 12/55 (21%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
 Frame = +3

Query: 294 DQGPHILHYSLQGMAGSDFHLTSK-RLELLQQGLRPVDCLVSWVFFASISPCHSG 455
           ++G H+ HY ++ +    +++T++ + + LQQ ++      + +    + PCH G
Sbjct: 194 EKGDHVKHYKIRKLDSGGYYITTRAQFDTLQQLVQHYSDRAAGLCCRLVVPCHKG 248

>FYN_XENLA (P13406) Proto-oncogene tyrosine-protein kinase Fyn (EC 2.7.10.2)|
           (p59-Fyn)
          Length = 536

 Score = 29.6 bits (65), Expect = 3.9
 Identities = 13/54 (24%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
 Frame = +3

Query: 297 QGPHILHYSLQGMAGSDFHLTSK-RLELLQQGLRPVDCLVSWVFFASISPCHSG 455
           +G H+ HY ++ +    +++T++ + E LQQ ++      + +    + PCH G
Sbjct: 195 KGDHVKHYKIRKLDNGGYYITTRAQFETLQQLVQHYSERAAGLCCRLVVPCHKG 248

>FYN_HUMAN (P06241) Proto-oncogene tyrosine-protein kinase Fyn (EC 2.7.10.2)|
           (p59-Fyn) (Protooncogene Syn) (SLK)
          Length = 536

 Score = 29.6 bits (65), Expect = 3.9
 Identities = 13/54 (24%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
 Frame = +3

Query: 297 QGPHILHYSLQGMAGSDFHLTSK-RLELLQQGLRPVDCLVSWVFFASISPCHSG 455
           +G H+ HY ++ +    +++T++ + E LQQ ++      + +    + PCH G
Sbjct: 195 KGDHVKHYKIRKLDNGGYYITTRAQFETLQQLVQHYSERAAGLCCRLVVPCHKG 248

>AGRN_HUMAN (O00468) Agrin precursor|
          Length = 2045

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = -3

Query: 387  PAGEAQVVCW*DESPIQPCPGESNAVCEVLDLKPEGGS 274
            P G     C  ++SP QP P    A C VL   PEGG+
Sbjct: 1577 PPGRVGPTCADEKSPCQPNPCHGAAPCRVL---PEGGA 1611

>HXB2_HUMAN (P14652) Homeobox protein Hox-B2 (Hox-2H) (Hox-2.8) (K8)|
          Length = 356

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 21/78 (26%), Positives = 30/78 (38%), Gaps = 14/78 (17%)
 Frame = -3

Query: 333 CPGESNAVCEVLD---LKPEGGSGARVRRSWGCC-----------SLKGKEAVIRSEGVG 196
           CPG    +C+  +     P G S +R   +W  C           S   +   +R EG G
Sbjct: 214 CPGALEDICDPAEEPAASPGGPSASRA--AWEACCHPPEVVPGALSADPRPLAVRLEGAG 271

Query: 195 FKRRGQVEEGSGGLQRRP 142
               G    G+GGL+  P
Sbjct: 272 ASSPGCALRGAGGLEPGP 289

>PUR9_CLOTE (Q892X3) Bifunctional purine biosynthesis protein purH [Includes:|
           Phosphoribosylaminoimidazolecarboxamide
           formyltransferase (EC 2.1.2.3) (AICAR transformylase);
           IMP cyclohydrolase (EC 3.5.4.10) (Inosinicase) (IMP
           synthetase) (ATIC)]
          Length = 499

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
 Frame = -3

Query: 324 ESNAVCEVLDLKPEGGSGARVRRSWGCCSL--KGKEAVIRSEGVGFKRRGQVEEGS 163
           +SNA+  V D K  G +G +V R W  C    +G  +V+ +    F     V++ S
Sbjct: 404 KSNAIVVVKDKKAVGIAGGQVNRIWAACQALERGNNSVVLASDAFFPFDDVVKKAS 459

>TRHY_HUMAN (Q07283) Trichohyalin|
          Length = 1898

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = -2

Query: 280  RERRKGTQILGLLQPQRQRSCHQKRRRWVQAS 185
            R+R+    +  LL  Q++R   Q+RRRW QA+
Sbjct: 1217 RDRQSQQDLQHLLGEQQERDREQERRRWQQAN 1248

>ABCA4_MOUSE (O35600) Retinal-specific ATP-binding cassette transporter|
            (ATP-binding cassette sub-family A member 4) (RIM ABC
            transporter) (RIM protein) (RmP)
          Length = 2310

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 16/48 (33%), Positives = 26/48 (54%)
 Frame = -3

Query: 258  RSWGCCSLKGKEAVIRSEGVGFKRRGQVEEGSGGLQRRPGEVCAQIQD 115
            RSW    L+  EA++   G+  KR  + ++ SGG+QR+     A + D
Sbjct: 1033 RSWEEAQLE-MEAMLEDTGLHHKRNEEAQDLSGGMQRKLSVAIAFVGD 1079

>GPRK2_DROME (P32866) G protein-coupled receptor kinase 2 (EC 2.7.11.16)|
          Length = 714

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 15/77 (19%)
 Frame = -3

Query: 231 GKEAVIRSEGVGFKRRGQVEEGSGG--------------LQRRPGEVCAQIQDRL-AAGR 97
           G E+V   EG     +G   EG GG              L     ++ AQ++++L + G+
Sbjct: 203 GDESVKCQEGHDDAEKGGGGEGGGGGKCVHVGGYPDELVLDVLNDDLIAQVRNKLNSGGK 262

Query: 96  ELFMPCVSETRQFIASQ 46
           ++F  CV+  + F+A +
Sbjct: 263 DIFAQCVNAVKAFLAGE 279


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,231,352
Number of Sequences: 219361
Number of extensions: 1239964
Number of successful extensions: 3466
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3463
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2968155324
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)