>ref|XM_475185.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2412

 Score =  119 bits (60), Expect = 8e-24
 Identities = 129/152 (84%)
 Strand = Plus / Minus

                                                                        
Query: 278  tcatgatccatgcagattttggatgtcgactttcaacgtttggagcttacgctcgacagc 337
            ||||||| |||| |||||||| || || |||||||| ||||||||||||||||| |||| 
Sbjct: 2412 tcatgattcatgaagattttgaatttcaactttcaaagtttggagcttacgctcaacagt 2353

                                                                        
Query: 338  ggacaactcgccctgaacaccctgcagccagtctatttttcgctggcatgcttcctggta 397
            ||||||||| |||||||||||||||||||| ||||| ||| |||| ||||| || || ||
Sbjct: 2352 ggacaactcaccctgaacaccctgcagccaatctatcttttgctgacatgcatcttgata 2293

                                            
Query: 398  cggtttactggcagtgtcgacgaactggacta 429
             ||||| ||| |||| || || || |||||||
Sbjct: 2292 aggtttgctgacagtctcaacaaaatggacta 2261

>gb|AC105773.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1562_H01,
             complete sequence
          Length = 88352

 Score =  119 bits (60), Expect = 8e-24
 Identities = 129/152 (84%)
 Strand = Plus / Minus

                                                                         
Query: 278   tcatgatccatgcagattttggatgtcgactttcaacgtttggagcttacgctcgacagc 337
             ||||||| |||| |||||||| || || |||||||| ||||||||||||||||| |||| 
Sbjct: 61810 tcatgattcatgaagattttgaatttcaactttcaaagtttggagcttacgctcaacagt 61751

                                                                         
Query: 338   ggacaactcgccctgaacaccctgcagccagtctatttttcgctggcatgcttcctggta 397
             ||||||||| |||||||||||||||||||| ||||| ||| |||| ||||| || || ||
Sbjct: 61750 ggacaactcaccctgaacaccctgcagccaatctatcttttgctgacatgcatcttgata 61691

                                             
Query: 398   cggtttactggcagtgtcgacgaactggacta 429
              ||||| ||| |||| || || || |||||||
Sbjct: 61690 aggtttgctgacagtctcaacaaaatggacta 61659

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  119 bits (60), Expect = 8e-24
 Identities = 129/152 (84%)
 Strand = Plus / Minus

                                                                            
Query: 278      tcatgatccatgcagattttggatgtcgactttcaacgtttggagcttacgctcgacagc 337
                ||||||| |||| |||||||| || || |||||||| ||||||||||||||||| |||| 
Sbjct: 18756407 tcatgattcatgaagattttgaatttcaactttcaaagtttggagcttacgctcaacagt 18756348

                                                                            
Query: 338      ggacaactcgccctgaacaccctgcagccagtctatttttcgctggcatgcttcctggta 397
                ||||||||| |||||||||||||||||||| ||||| ||| |||| ||||| || || ||
Sbjct: 18756347 ggacaactcaccctgaacaccctgcagccaatctatcttttgctgacatgcatcttgata 18756288

                                                
Query: 398      cggtttactggcagtgtcgacgaactggacta 429
                 ||||| ||| |||| || || || |||||||
Sbjct: 18756287 aggtttgctgacagtctcaacaaaatggacta 18756256

>dbj|AK120123.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013026B01, full
            insert sequence
          Length = 2535

 Score =  119 bits (60), Expect = 8e-24
 Identities = 129/152 (84%)
 Strand = Plus / Minus

                                                                        
Query: 278  tcatgatccatgcagattttggatgtcgactttcaacgtttggagcttacgctcgacagc 337
            ||||||| |||| |||||||| || || |||||||| ||||||||||||||||| |||| 
Sbjct: 2528 tcatgattcatgaagattttgaatttcaactttcaaagtttggagcttacgctcaacagt 2469

                                                                        
Query: 338  ggacaactcgccctgaacaccctgcagccagtctatttttcgctggcatgcttcctggta 397
            ||||||||| |||||||||||||||||||| ||||| ||| |||| ||||| || || ||
Sbjct: 2468 ggacaactcaccctgaacaccctgcagccaatctatcttttgctgacatgcatcttgata 2409

                                            
Query: 398  cggtttactggcagtgtcgacgaactggacta 429
             ||||| ||| |||| || || || |||||||
Sbjct: 2408 aggtttgctgacagtctcaacaaaatggacta 2377

>gb|AY110260.1| Zea mays CL26716_1 mRNA sequence
          Length = 570

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 104/124 (83%)
 Strand = Plus / Plus

                                                                       
Query: 280 atgatccatgcagattttggatgtcgactttcaacgtttggagcttacgctcgacagcgg 339
           |||||||||  ||||||||||| || |||||||| ||||||||||||||||||||||| |
Sbjct: 166 atgatccattaagattttggatttcaactttcaaagtttggagcttacgctcgacagcag 225

                                                                       
Query: 340 acaactcgccctgaacaccctgcagccagtctatttttcgctggcatgcttcctggtacg 399
           | | ||| |||||||| ||||| | ||| ||||     ||||| |||||||||||||| |
Sbjct: 226 atagctcaccctgaacgccctgtaaccaatctannnnncgctgacatgcttcctggtaag 285

               
Query: 400 gttt 403
           ||||
Sbjct: 286 gttt 289

>gb|AC154204.2| Mus musculus BAC clone RP24-393D5 from chromosome 17, complete sequence
          Length = 183408

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 215    aaaattgatgatcgtgtgtaaggtg 239
              |||||| ||||||||||||||||||
Sbjct: 116064 aaaattcatgatcgtgtgtaaggtg 116040

>gb|AC154647.2| Mus musculus BAC clone RP23-283P8 from chromosome 17, complete sequence
          Length = 208252

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 215    aaaattgatgatcgtgtgtaaggtg 239
              |||||| ||||||||||||||||||
Sbjct: 197394 aaaattcatgatcgtgtgtaaggtg 197418

>gb|AC104694.3| Homo sapiens BAC clone RP11-337M10 from 2, complete sequence
          Length = 55177

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 241   aaacaaacgaacaaaatctca 261
             |||||||||||||||||||||
Sbjct: 36237 aaacaaacgaacaaaatctca 36217

>ref|XM_429482.1| PREDICTED: Gallus gallus LOC417237 (LOC417237), mRNA
          Length = 703

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 52  tctgtagagcctccctcatgggca 75
           ||||||||||||| ||||||||||
Sbjct: 155 tctgtagagcctctctcatgggca 132

>ref|XM_323404.1| Neurospora crassa OR74A predicted protein (NCU04086.1) partial mRNA
          Length = 1026

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 287 atgcagattttggatgtcgacttt 310
           ||||||||| ||||||||||||||
Sbjct: 898 atgcagattgtggatgtcgacttt 921

>ref|XM_950989.1| Neurospora crassa OR74A hypothetical protein (NCU04086.1) partial
           mRNA
          Length = 1026

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 287 atgcagattttggatgtcgacttt 310
           ||||||||| ||||||||||||||
Sbjct: 898 atgcagattgtggatgtcgacttt 921

>gb|AC118540.15| Mus musculus strain 129/SvJ clone mgs1-169d12 map 3, complete sequence
          Length = 191014

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 354    acaccctgcagccagtctat 373
              ||||||||||||||||||||
Sbjct: 127327 acaccctgcagccagtctat 127346

>gb|AC127283.2| Mus musculus BAC clone RP23-323E20 from chromosome 3, complete sequence
          Length = 210014

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 354    acaccctgcagccagtctat 373
              ||||||||||||||||||||
Sbjct: 155694 acaccctgcagccagtctat 155713

>gb|AC004142.2| Homo sapiens BAC clone CTB-118D7 from 7, complete sequence
          Length = 166126

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 240   caaacaaacgaacaaaatct 259
             ||||||||||||||||||||
Sbjct: 72168 caaacaaacgaacaaaatct 72187

>emb|AL669822.10| Mouse DNA sequence from clone RP23-47J12 on chromosome 11 Contains
            the 5' end of the Cobl gene for cordon-bleu and a CpG
            island, complete sequence
          Length = 137869

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 240  caaacaaacgaacaaaatct 259
            ||||||||||||||||||||
Sbjct: 6668 caaacaaacgaacaaaatct 6649

>gb|AC161579.4| Mus musculus chromosome 19, clone RP23-298M4, complete sequence
          Length = 188366

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 237    gtgcaaacaaacgaacaaaa 256
              ||||||||||||||||||||
Sbjct: 117805 gtgcaaacaaacgaacaaaa 117786

>gb|AC092060.2| Homo sapiens chromosome 3 clone RP11-582M4, complete sequence
          Length = 181220

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 149    tacatacacgtctatcatac 168
              ||||||||||||||||||||
Sbjct: 112038 tacatacacgtctatcatac 112057

>dbj|AK164966.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched
            library, clone:E130012G17 product:striatin, calmodulin
            binding protein 3, full insert sequence
          Length = 3702

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 240  caaacaaacgaacaaaatct 259
            ||||||||||||||||||||
Sbjct: 1764 caaacaaacgaacaaaatct 1783

>gb|AC060788.11| Homo sapiens chromosome 8, clone CTD-2008O4, complete sequence
          Length = 177717

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 240    caaacaaacgaacaaaatctcaac 263
              |||||||||||||||||| |||||
Sbjct: 157178 caaacaaacgaacaaaatatcaac 157155

>gb|AC159644.3| Mus musculus BAC clone RP23-358A18 from chromosome 12, complete
             sequence
          Length = 196310

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 240   caaacaaacgaacaaaatct 259
             ||||||||||||||||||||
Sbjct: 42060 caaacaaacgaacaaaatct 42041

>gb|AC005259.1|AC005259 Mouse BAC CitbCJ7 219m7, genomic sequence, complete sequence
          Length = 124230

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 240   caaacaaacgaacaaaatct 259
             ||||||||||||||||||||
Sbjct: 98887 caaacaaacgaacaaaatct 98868

>emb|AL672276.9| Mouse DNA sequence from clone RP23-124L1 on chromosome 4, complete
              sequence
          Length = 208030

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 240    caaacaaacgaacaaaatct 259
              ||||||||||||||||||||
Sbjct: 105696 caaacaaacgaacaaaatct 105715

>gb|AC158404.2| Mus musculus BAC clone RP24-112K13 from chromosome 12, complete sequence
          Length = 174961

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 240    caaacaaacgaacaaaatct 259
              ||||||||||||||||||||
Sbjct: 169956 caaacaaacgaacaaaatct 169937


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,008,723
Number of Sequences: 3902068
Number of extensions: 3008723
Number of successful extensions: 56711
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 56661
Number of HSP's gapped (non-prelim): 50
length of query: 451
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 429
effective length of database: 17,147,199,772
effective search space: 7356148702188
effective search space used: 7356148702188
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)