ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl27a10 |
|---|---|
| Clone Library Name | barley_pub |
>emb|Z49145.1|HVPAL2MR H.vulgare partial PAL mRNA for phenylalanine ammonia-lyase (1670 bp) Length = 1670 Score = 815 bits (411), Expect = 0.0 Identities = 437/448 (97%) Strand = Plus / Minus Query: 27 tttatcatgaaaacttatcacacagtacccttttaacttacatcataaaagttctactgg 86 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1658 tttatcatgaaaacttatcacacagtacccttttaacttacatcataaaagatctactgg 1599 Query: 87 ctacccaacactaccaggtcatgcaattgcaatctttagcaatgcactggaagctctgga 146 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1598 ctacccaacactaccaggtcatgcaattgcaacctttagcaatgcactggaagctctgga 1539 Query: 147 agaacgtcgcaaacatcaacttggagagattacaacnnnnnnncagtatcatcactggag 206 ||||||||||||||||||||||| |||||||||||| |||||||||||||||| Sbjct: 1538 agaacgtcgcaaacatcaacttgtagagattacaacaaaaaaatagtatcatcactggag 1479 Query: 207 ccttctgaaatttgaagcacgctactcttccatttctggatcctctgttcagcagatagg 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1478 ccttctgaaatttgaagcacgctactcttccatttctggatcctctgttcagcagatagg 1419 Query: 267 caggggctcaccattccactccttcaggcactcaaggagcgcgtcgatgtgcttgccttg 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1418 caggggctcaccattccactccttcaggcactcaaggagcgcgtcgatgtgcttgccttg 1359 Query: 327 gttcatggcaacgaacaccttgtccacctcttccccaggagaccgcgtcttctccccagt 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1358 gttcatggcaacgaacaccttgtccacctcttccccaggagaccgcgtcttctccccagt 1299 Query: 387 caagtactccgttccaagctccttgcgcacgaaccggtagagcgggtacgaccgacattc 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1298 caagtactccgttccaagctccttgcgcacgaaccggtagagcgggtacgaccgacattc 1239 Query: 447 ggagatacggttttgctgtgctgcagtg 474 |||||||||||||||||||||||||||| Sbjct: 1238 ggagatacggttttgctgtgctgcagtg 1211
>emb|X99705.1|TAPALGEN1 T.aestivum PAL gene Length = 3444 Score = 577 bits (291), Expect = e-161 Identities = 432/477 (90%), Gaps = 7/477 (1%) Strand = Plus / Minus Query: 1 gagttttactttctggaaccagtatatttatcatgaaaacttatcacaca--gtaccctt 58 |||||||||||||| ||||| |||||||||||||| |||||||||||||| |||||||| Sbjct: 3368 gagttttactttcttgaaccggtatatttatcatggaaacttatcacacactgtaccctt 3309 Query: 59 tta--acttaca-tcataaaagttctactggctacccaacactaccaggtcatgcaattg 115 ||| ||||||| ||| | ||||| ||||| |||||||||||| ||| |||||||||||| Sbjct: 3308 ttataacttacaatcaaagaagttttactgtctacccaacactgccatgtcatgcaattg 3249 Query: 116 caatctttagcaatgcactggaagctct--ggaagaacgtcgcaaacatcaacttggaga 173 |||||||| |||||||| |||||||||| |||||||||| |||||||||||||| ||| Sbjct: 3248 caatctttggcaatgcattggaagctctctggaagaacgttgcaaacatcaacttttaga 3189 Query: 174 gattacaacnnnnnnncagtatcatcactggagccttctgaaatttgaagcacgctactc 233 ||||||| |||||||| ||||| || |||||||||| ||||||||||||||| Sbjct: 3188 aattacaatgaaaaaacagtatcagcactgcaggcttctgaaatctgaagcacgctactc 3129 Query: 234 ttccatttctggatcctctgttcagcagataggcaggggctcaccattccactccttcag 293 |||||||||| ||| |||||||||||||| |||||||||||| || ||||||||||| || Sbjct: 3128 ttccatttcttgatgctctgttcagcagagaggcaggggctcgccgttccactccttgag 3069 Query: 294 gcactcaaggagcgcgtcgatgtgcttgccttggttcatggcaacgaacaccttgtccac 353 |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3068 gcactccagcagcgcgtcgatgtgcttgccttggttcatggcaacgaacaccttgtccac 3009 Query: 354 ctcttccccaggagaccgcgtcttctccccagtcaagtactccgttccaagctccttgcg 413 |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 3008 ctcttcgccaggagaccgcgtcttctccccggtcaagtactccgttccaagctccttgcg 2949 Query: 414 cacgaaccggtagagcgggtacgaccgacattcggagatacggttttgctgtgctgc 470 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 2948 cacgaaccggtagagcgggtacgaccgacattcggcgatacggttttgctgtgctgc 2892
>gb|L11883.1|WHTWALI4A Triticum aestivum phenylalanine ammonia-lyase (wali4) mRNA, 3' end, partial cds Length = 634 Score = 523 bits (264), Expect = e-145 Identities = 420/471 (89%), Gaps = 10/471 (2%) Strand = Plus / Minus Query: 8 actttctggaaccagtatatttatcatgaaaacttatcacaca--gtaccctttta--ac 63 ||||||| ||||||||||||||| |||| |||||||||||||| ||||||||||| || Sbjct: 634 actttcttgaaccagtatatttaccatggaaacttatcacacactgtacccttttataac 575 Query: 64 ttacatcataaaagttctactggctacccaacactaccaggtcatgcaattgcaatcttt 123 |||||||| |||||||||| |||||||||||||||||| |||||||||||||||||||| Sbjct: 574 ttacatcaacaaagttctaccggctacccaacactaccaagtcatgcaattgcaatcttt 515 Query: 124 agcaatgcactggaagctctggaagaacgtcgcaaacatcaacttggagagattacaacn 183 ||| || |||||||||||||||||| |||||||||||||| ||| ||||||| Sbjct: 514 ggcattg-----gaagctctggaagaacgttgcaaacatcaacttttagaaattacaatg 460 Query: 184 nnnnnncagtatcatcactggagccttctgaaatttgaagcacgctactcttccatttct 243 |||||| ||||||||||||||||||||| ||||||| || |||||||||| || Sbjct: 459 aaaaaacagtataatcactggagccttctgaaatctgaagcaa-ctgctcttccattcct 401 Query: 244 ggatcctctgttcagcagataggcaggggctcaccattccactccttcaggcactcaagg 303 |||||||||||||| |||||||| |||||||| || ||||||||||| || ||||| || Sbjct: 400 ggatcctctgttcaacagataggtaggggctcgccgttccactccttgagacactccagc 341 Query: 304 agcgcgtcgatgtgcttgccttggttcatggcaacgaacaccttgtccacctcttcccca 363 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 340 agcgcgtcgatgtgcttgccctggttcatggcaacgaacaccttgtccacctcttcgcca 281 Query: 364 ggagaccgcgtcttctccccagtcaagtactccgttccaagctccttgcgcacgaaccgg 423 |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 280 ggagaccgcgtcttctccccggtcaagtactctgttccaagctccttgcgcacgaaccgg 221 Query: 424 tagagcgggtacgaccgacattcggagatacggttttgctgtgctgcagtg 474 |||||||||||||||||||| |||| ||||||||||||||||| ||||||| Sbjct: 220 tagagcgggtacgaccgacaatcggcgatacggttttgctgtgttgcagtg 170
>emb|X99725.1|TAPALGEN2 T.aestivum PAL gene, coding region Length = 1419 Score = 331 bits (167), Expect = 1e-87 Identities = 245/271 (90%) Strand = Plus / Minus Query: 204 gagccttctgaaatttgaagcacgctactcttccatttctggatcctctgttcagcagat 263 |||||||| ||||| |||||||| ||||||||| ||||| |||||||| || |||||| Sbjct: 1072 gagccttcagaaatctgaagcacactactcttcactttctcgatcctctatttagcagag 1013 Query: 264 aggcaggggctcaccattccactccttcaggcactcaaggagcgcgtcgatgtgcttgcc 323 |||||||||||| || ||||||||||| ||||||||||| ||||| |||||||||||||| Sbjct: 1012 aggcaggggctcgccgttccactccttgaggcactcaagcagcgcatcgatgtgcttgcc 953 Query: 324 ttggttcatggcaacgaacaccttgtccacctcttccccaggagaccgcgtcttctcccc 383 ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| || Sbjct: 952 ctggttcatggcaacgaacaccttgtccacctcttcgccaggagaccccgtcttctctcc 893 Query: 384 agtcaagtactccgttccaagctccttgcgcacgaaccggtagagcgggtacgaccgaca 443 ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 892 ggtcaagtactccgttccaagctccttgcgcacgaatcggtagagtgggtacgaccgaca 833 Query: 444 ttcggagatacggttttgctgtgctgcagtg 474 |||| ||||||||||| ||||| |||||| Sbjct: 832 ttcgtcaatacggttttgttgtgcggcagtg 802 Score = 101 bits (51), Expect = 2e-18 Identities = 94/108 (87%), Gaps = 4/108 (3%) Strand = Plus / Minus Query: 14 tggaaccagtatatttatcatgaaaacttatcacacagtacccttttaacttacat---- 69 |||| |||||| |||||||||| ||| ||| |||||| || | ||||||||||| | Sbjct: 1260 tggagccagtagatttatcatgtaaatttaacacacactaactttttaacttacgtacac 1201 Query: 70 cataaaagttctactggctacccaacactaccaggtcatgcaattgca 117 ||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 1200 cataaaagttctactggctacccaacactaccaagtcatgcaattgca 1153
>emb|X99483.1|HVPAL6 H.vulgare mRNA for phenylalanine ammonia-lyase, pal6 Length = 1251 Score = 202 bits (102), Expect = 7e-49 Identities = 156/174 (89%) Strand = Plus / Minus Query: 252 tgttcagcagataggcaggggctcaccattccactccttcaggcactcaaggagcgcgtc 311 |||| ||||||||||||| ||||| |||||||||||||| ||||| || || |||||||| Sbjct: 1059 tgtttagcagataggcagaggctcgccattccactccttgaggcattccagcagcgcgtc 1000 Query: 312 gatgtgcttgccttggttcatggcaacgaacaccttgtccacctcttccccaggagaccg 371 |||||||||||| |||||||||||||| ||||||||||||||||| ||||| || ||||| Sbjct: 999 gatgtgcttgccctggttcatggcaacaaacaccttgtccacctcctccccgggtgaccg 940 Query: 372 cgtcttctccccagtcaagtactccgttccaagctccttgcgcacgaaccggta 425 |||||||| || ||||||||| ||||||| ||||||| ||||||||||||||| Sbjct: 939 tgtcttctctcctgtcaagtacaccgttcccagctcctcgcgcacgaaccggta 886
>ref|XM_473196.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2145 Score = 200 bits (101), Expect = 3e-48 Identities = 164/185 (88%) Strand = Plus / Minus Query: 255 tcagcagataggcaggggctcaccattccactccttcaggcactcaaggagcgcgtcgat 314 ||||||||| ||||| ||||| || ||||||||||| |||||||| || || |||||||| Sbjct: 2145 tcagcagatgggcagaggctcgccgttccactccttgaggcactcgagcagtgcgtcgat 2086 Query: 315 gtgcttgccttggttcatggcaacgaacaccttgtccacctcttccccaggagaccgcgt 374 ||||||||| ||||||||||| ||||||||||||| |||||| || || || |||||||| Sbjct: 2085 gtgcttgccctggttcatggcgacgaacaccttgttcacctcctcgccgggcgaccgcgt 2026 Query: 375 cttctccccagtcaagtactccgttccaagctccttgcgcacgaaccggtagagcgggta 434 ||||||||| ||||||||||| || || ||||||| ||| |||||||||||||||||||| Sbjct: 2025 cttctccccggtcaagtactctgtcccgagctcctcgcggacgaaccggtagagcgggta 1966 Query: 435 cgacc 439 ||||| Sbjct: 1965 cgacc 1961
>emb|AL731616.5|OSJN00262 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0073E02, complete sequence Length = 139080 Score = 200 bits (101), Expect = 3e-48 Identities = 164/185 (88%) Strand = Plus / Plus Query: 255 tcagcagataggcaggggctcaccattccactccttcaggcactcaaggagcgcgtcgat 314 ||||||||| ||||| ||||| || ||||||||||| |||||||| || || |||||||| Sbjct: 118212 tcagcagatgggcagaggctcgccgttccactccttgaggcactcgagcagtgcgtcgat 118271 Query: 315 gtgcttgccttggttcatggcaacgaacaccttgtccacctcttccccaggagaccgcgt 374 ||||||||| ||||||||||| ||||||||||||| |||||| || || || |||||||| Sbjct: 118272 gtgcttgccctggttcatggcgacgaacaccttgttcacctcctcgccgggcgaccgcgt 118331 Query: 375 cttctccccagtcaagtactccgttccaagctccttgcgcacgaaccggtagagcgggta 434 ||||||||| ||||||||||| || || ||||||| ||| |||||||||||||||||||| Sbjct: 118332 cttctccccggtcaagtactctgtcccgagctcctcgcggacgaaccggtagagcgggta 118391 Query: 435 cgacc 439 ||||| Sbjct: 118392 cgacc 118396 Score = 63.9 bits (32), Expect = 4e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 255 tcagcagataggcaggggctcaccattccactccttcaggcactcaaggagcgcgtcgat 314 ||||||||| ||||||||||| || ||||||||||| |||||||| || | || |||||| Sbjct: 98026 tcagcagatgggcaggggctcgccgttccactccttgaggcactcgagcatcgggtcgat 98085 Query: 315 gtgcttgc 322 | |||||| Sbjct: 98086 gagcttgc 98093
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 200 bits (101), Expect = 3e-48 Identities = 164/185 (88%) Strand = Plus / Plus Query: 255 tcagcagataggcaggggctcaccattccactccttcaggcactcaaggagcgcgtcgat 314 ||||||||| ||||| ||||| || ||||||||||| |||||||| || || |||||||| Sbjct: 25900802 tcagcagatgggcagaggctcgccgttccactccttgaggcactcgagcagtgcgtcgat 25900861 Query: 315 gtgcttgccttggttcatggcaacgaacaccttgtccacctcttccccaggagaccgcgt 374 ||||||||| ||||||||||| ||||||||||||| |||||| || || || |||||||| Sbjct: 25900862 gtgcttgccctggttcatggcgacgaacaccttgttcacctcctcgccgggcgaccgcgt 25900921 Query: 375 cttctccccagtcaagtactccgttccaagctccttgcgcacgaaccggtagagcgggta 434 ||||||||| ||||||||||| || || ||||||| ||| |||||||||||||||||||| Sbjct: 25900922 cttctccccggtcaagtactctgtcccgagctcctcgcggacgaaccggtagagcgggta 25900981 Query: 435 cgacc 439 ||||| Sbjct: 25900982 cgacc 25900986 Score = 63.9 bits (32), Expect = 4e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 255 tcagcagataggcaggggctcaccattccactccttcaggcactcaaggagcgcgtcgat 314 ||||||||| ||||||||||| || ||||||||||| |||||||| || | || |||||| Sbjct: 25880616 tcagcagatgggcaggggctcgccgttccactccttgaggcactcgagcatcgggtcgat 25880675 Query: 315 gtgcttgc 322 | |||||| Sbjct: 25880676 gagcttgc 25880683
>dbj|AK067801.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013118I15, full insert sequence Length = 2551 Score = 200 bits (101), Expect = 3e-48 Identities = 164/185 (88%) Strand = Plus / Minus Query: 255 tcagcagataggcaggggctcaccattccactccttcaggcactcaaggagcgcgtcgat 314 ||||||||| ||||| ||||| || ||||||||||| |||||||| || || |||||||| Sbjct: 2270 tcagcagatgggcagaggctcgccgttccactccttgaggcactcgagcagtgcgtcgat 2211 Query: 315 gtgcttgccttggttcatggcaacgaacaccttgtccacctcttccccaggagaccgcgt 374 ||||||||| ||||||||||| ||||||||||||| |||||| || || || |||||||| Sbjct: 2210 gtgcttgccctggttcatggcgacgaacaccttgttcacctcctcgccgggcgaccgcgt 2151 Query: 375 cttctccccagtcaagtactccgttccaagctccttgcgcacgaaccggtagagcgggta 434 ||||||||| ||||||||||| || || ||||||| ||| |||||||||||||||||||| Sbjct: 2150 cttctccccggtcaagtactctgtcccgagctcctcgcggacgaaccggtagagcgggta 2091 Query: 435 cgacc 439 ||||| Sbjct: 2090 cgacc 2086
>emb|AL731629.2|OSJN00274 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0061C13, complete sequence Length = 139226 Score = 200 bits (101), Expect = 3e-48 Identities = 164/185 (88%) Strand = Plus / Plus Query: 255 tcagcagataggcaggggctcaccattccactccttcaggcactcaaggagcgcgtcgat 314 ||||||||| ||||| ||||| || ||||||||||| |||||||| || || |||||||| Sbjct: 27064 tcagcagatgggcagaggctcgccgttccactccttgaggcactcgagcagtgcgtcgat 27123 Query: 315 gtgcttgccttggttcatggcaacgaacaccttgtccacctcttccccaggagaccgcgt 374 ||||||||| ||||||||||| ||||||||||||| |||||| || || || |||||||| Sbjct: 27124 gtgcttgccctggttcatggcgacgaacaccttgttcacctcctcgccgggcgaccgcgt 27183 Query: 375 cttctccccagtcaagtactccgttccaagctccttgcgcacgaaccggtagagcgggta 434 ||||||||| ||||||||||| || || ||||||| ||| |||||||||||||||||||| Sbjct: 27184 cttctccccggtcaagtactctgtcccgagctcctcgcggacgaaccggtagagcgggta 27243 Query: 435 cgacc 439 ||||| Sbjct: 27244 cgacc 27248 Score = 63.9 bits (32), Expect = 4e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 255 tcagcagataggcaggggctcaccattccactccttcaggcactcaaggagcgcgtcgat 314 ||||||||| ||||||||||| || ||||||||||| |||||||| || | || |||||| Sbjct: 6878 tcagcagatgggcaggggctcgccgttccactccttgaggcactcgagcatcgggtcgat 6937 Query: 315 gtgcttgc 322 | |||||| Sbjct: 6938 gagcttgc 6945
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 184 bits (93), Expect = 2e-43 Identities = 162/185 (87%) Strand = Plus / Plus Query: 255 tcagcagataggcaggggctcaccattccactccttcaggcactcaaggagcgcgtcgat 314 ||||||||| ||||| ||||| || ||||||||||| |||||||| || || |||||||| Sbjct: 16320134 tcagcagatgggcagaggctcgccgttccactccttgaggcactcgagcagtgcgtcgat 16320193 Query: 315 gtgcttgccttggttcatggcaacgaacaccttgtccacctcttccccaggagaccgcgt 374 ||||||||| |||||||||| ||| ||||||||| |||||| || || || |||||||| Sbjct: 16320194 gtgcttgcccaggttcatggcgacggacaccttgttcacctcctcgccgggcgaccgcgt 16320253 Query: 375 cttctccccagtcaagtactccgttccaagctccttgcgcacgaaccggtagagcgggta 434 ||||||||| ||||||||||| || || ||||||||||| ||| |||||||||||||||| Sbjct: 16320254 cttctccccggtcaagtactctgtcccgagctccttgcggacggaccggtagagcgggta 16320313 Query: 435 cgacc 439 ||||| Sbjct: 16320314 cgacc 16320318 Score = 109 bits (55), Expect = 8e-21 Identities = 148/179 (82%) Strand = Plus / Minus Query: 265 ggcaggggctcaccattccactccttcaggcactcaaggagcgcgtcgatgtgcttgcct 324 ||||||||| | || |||||||| | |||||||| || || | || |||||||||| Sbjct: 20335932 ggcaggggcgcgcctttccactcgctgaggcactccagcagtgggttgatgtgcttgtgc 20335873 Query: 325 tggttcatggcaacgaacaccttgtccacctcttccccaggagaccgcgtcttctcccca 384 ||||||||||| | | ||||||||||||||| ||||| || |||||||||||||| || Sbjct: 20335872 tggttcatggcgatcaccaccttgtccacctcctccccgggcgaccgcgtcttctcgccg 20335813 Query: 385 gtcaagtactccgttccaagctccttgcgcacgaaccggtagagcgggtacgaccgaca 443 |||| |||||| | || ||||||||||||||||||| ||| ||||||||||| ||||| Sbjct: 20335812 gtcaggtactcggcgccgagctccttgcgcacgaacctgtacagcgggtacgagcgaca 20335754
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 184 bits (93), Expect = 2e-43 Identities = 162/185 (87%) Strand = Plus / Plus Query: 255 tcagcagataggcaggggctcaccattccactccttcaggcactcaaggagcgcgtcgat 314 ||||||||| ||||| ||||| || ||||||||||| |||||||| || || |||||||| Sbjct: 16273367 tcagcagatgggcagaggctcgccgttccactccttgaggcactcgagcagtgcgtcgat 16273426 Query: 315 gtgcttgccttggttcatggcaacgaacaccttgtccacctcttccccaggagaccgcgt 374 ||||||||| |||||||||| ||| ||||||||| |||||| || || || |||||||| Sbjct: 16273427 gtgcttgcccaggttcatggcgacggacaccttgttcacctcctcgccgggcgaccgcgt 16273486 Query: 375 cttctccccagtcaagtactccgttccaagctccttgcgcacgaaccggtagagcgggta 434 ||||||||| ||||||||||| || || ||||||||||| ||| |||||||||||||||| Sbjct: 16273487 cttctccccggtcaagtactctgtcccgagctccttgcggacggaccggtagagcgggta 16273546 Query: 435 cgacc 439 ||||| Sbjct: 16273547 cgacc 16273551 Score = 109 bits (55), Expect = 8e-21 Identities = 148/179 (82%) Strand = Plus / Minus Query: 265 ggcaggggctcaccattccactccttcaggcactcaaggagcgcgtcgatgtgcttgcct 324 ||||||||| | || |||||||| | |||||||| || || | || |||||||||| Sbjct: 20262146 ggcaggggcgcgcctttccactcgctgaggcactccagcagtgggttgatgtgcttgtgc 20262087 Query: 325 tggttcatggcaacgaacaccttgtccacctcttccccaggagaccgcgtcttctcccca 384 ||||||||||| | | ||||||||||||||| ||||| || |||||||||||||| || Sbjct: 20262086 tggttcatggcgatcaccaccttgtccacctcctccccgggcgaccgcgtcttctcgccg 20262027 Query: 385 gtcaagtactccgttccaagctccttgcgcacgaaccggtagagcgggtacgaccgaca 443 |||| |||||| | || ||||||||||||||||||| ||| ||||||||||| ||||| Sbjct: 20262026 gtcaggtactcggcgccgagctccttgcgcacgaacctgtacagcgggtacgagcgaca 20261968
>emb|AL732380.4|CNS08C93 Oryza sativa chromosome 12, . BAC OSJNBb0119N22 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 79613 Score = 184 bits (93), Expect = 2e-43 Identities = 162/185 (87%) Strand = Plus / Plus Query: 255 tcagcagataggcaggggctcaccattccactccttcaggcactcaaggagcgcgtcgat 314 ||||||||| ||||| ||||| || ||||||||||| |||||||| || || |||||||| Sbjct: 67185 tcagcagatgggcagaggctcgccgttccactccttgaggcactcgagcagtgcgtcgat 67244 Query: 315 gtgcttgccttggttcatggcaacgaacaccttgtccacctcttccccaggagaccgcgt 374 ||||||||| |||||||||| ||| ||||||||| |||||| || || || |||||||| Sbjct: 67245 gtgcttgcccaggttcatggcgacggacaccttgttcacctcctcgccgggcgaccgcgt 67304 Query: 375 cttctccccagtcaagtactccgttccaagctccttgcgcacgaaccggtagagcgggta 434 ||||||||| ||||||||||| || || ||||||||||| ||| |||||||||||||||| Sbjct: 67305 cttctccccggtcaagtactctgtcccgagctccttgcggacggaccggtagagcgggta 67364 Query: 435 cgacc 439 ||||| Sbjct: 67365 cgacc 67369
>ref|XM_466849.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2407 Score = 133 bits (67), Expect = 6e-28 Identities = 157/187 (83%) Strand = Plus / Minus Query: 253 gttcagcagataggcaggggctcaccattccactccttcaggcactcaaggagcgcgtcg 312 ||||||||||| ||||||||||| || ||||||||||| |||||||| || | || |||| Sbjct: 2179 gttcagcagattggcaggggctcgccgttccactccttgaggcactcgagcaacgggtcg 2120 Query: 313 atgtgcttgccttggttcatggcaacgaacaccttgtccacctcttccccaggagaccgc 372 ||||||||||||| ||| || || || | ||||||| || ||| || ||||| || || Sbjct: 2119 atgtgcttgccttcgttgatagccacaagaaccttgttcagctcctcgccaggcgatcgt 2060 Query: 373 gtcttctccccagtcaagtactccgttccaagctccttgcgcacgaaccggtagagcggg 432 |||||||| || |||| ||||| ||||| ||||||| ||||||||||||||||||||| Sbjct: 2059 gtcttctcgccggtcaggtactttgttccgagctcctcgcgcacgaaccggtagagcgga 2000 Query: 433 tacgacc 439 ||||||| Sbjct: 1999 tacgacc 1993
>emb|X87946.1|OSDNAZB8 O.sativa ZB8 gene Length = 4660 Score = 133 bits (67), Expect = 6e-28 Identities = 157/187 (83%) Strand = Plus / Minus Query: 253 gttcagcagataggcaggggctcaccattccactccttcaggcactcaaggagcgcgtcg 312 ||||||||||| ||||||||||| || ||||||||||| |||||||| || | || |||| Sbjct: 4578 gttcagcagattggcaggggctcgccgttccactccttgaggcactcgagcaacgggtcg 4519 Query: 313 atgtgcttgccttggttcatggcaacgaacaccttgtccacctcttccccaggagaccgc 372 ||||||||||||| ||| || || || | ||||||| || ||| || ||||| || || Sbjct: 4518 atgtgcttgccttcgttgatagccacaagaaccttgttcagctcctcgccaggcgatcgt 4459 Query: 373 gtcttctccccagtcaagtactccgttccaagctccttgcgcacgaaccggtagagcggg 432 |||||||| || |||| ||||| ||||| ||||||| ||||||||||||||||||||| Sbjct: 4458 gtcttctcgccggtcaggtactttgttccgagctcctcgcgcacgaaccggtagagcgga 4399 Query: 433 tacgacc 439 ||||||| Sbjct: 4398 tacgacc 4392
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 133 bits (67), Expect = 6e-28 Identities = 157/187 (83%) Strand = Plus / Plus Query: 253 gttcagcagataggcaggggctcaccattccactccttcaggcactcaaggagcgcgtcg 312 ||||||||||| ||||||||||| || ||||||||||| |||||||| || | || |||| Sbjct: 25025216 gttcagcagattggcaggggctcgccgttccactccttgaggcactcgagcaacgggtcg 25025275 Query: 313 atgtgcttgccttggttcatggcaacgaacaccttgtccacctcttccccaggagaccgc 372 ||||||||||||| ||| || || || | ||||||| || ||| || ||||| || || Sbjct: 25025276 atgtgcttgccttcgttgatagccacaagaaccttgttcagctcctcgccaggcgatcgt 25025335 Query: 373 gtcttctccccagtcaagtactccgttccaagctccttgcgcacgaaccggtagagcggg 432 |||||||| || |||| ||||| ||||| ||||||| ||||||||||||||||||||| Sbjct: 25025336 gtcttctcgccggtcaggtactttgttccgagctcctcgcgcacgaaccggtagagcgga 25025395 Query: 433 tacgacc 439 ||||||| Sbjct: 25025396 tacgacc 25025402 Score = 119 bits (60), Expect = 9e-24 Identities = 156/188 (82%) Strand = Plus / Plus Query: 250 tctgttcagcagataggcaggggctcaccattccactccttcaggcactcaaggagcgcg 309 ||||||||||||| ||||| ||| | |||||||| ||||| ||||| || || |||| | Sbjct: 25004070 tctgttcagcagagtggcagtggcgcgccattccattccttgaggcattcgagcagcggg 25004129 Query: 310 tcgatgtgcttgccttggttcatggcaacgaacaccttgtccacctcttccccaggagac 369 ||||||||||||| | ||| ||||| |||| |||||||| || ||| || || || ||| Sbjct: 25004130 tcgatgtgcttgcgctcgttgatggcgacgagcaccttgttcagctcctcgccgggcgac 25004189 Query: 370 cgcgtcttctccccagtcaagtactccgttccaagctccttgcgcacgaaccggtagagc 429 ||||||||||| || || | |||||| || || | ||||| ||||||||||||||||||| Sbjct: 25004190 cgcgtcttctcgccggtgaggtactcggtgccgacctcctcgcgcacgaaccggtagagc 25004249 Query: 430 gggtacga 437 |||||||| Sbjct: 25004250 gggtacga 25004257 Score = 115 bits (58), Expect = 1e-22 Identities = 148/178 (83%) Strand = Plus / Plus Query: 257 agcagataggcaggggctcaccattccactccttcaggcactcaaggagcgcgtcgatgt 316 ||||||| ||||||||| | || ||||||||||| || |||||||| |||| || |||| Sbjct: 25011625 agcagatgggcaggggcgcgccgttccactccttgagacactcaagcagcggatcaatgt 25011684 Query: 317 gcttgccttggttcatggcaacgaacaccttgtccacctcttccccaggagaccgcgtct 376 ||||||||||||| ||||| |||| |||||||| || ||| || || || |||||||||| Sbjct: 25011685 gcttgccttggttgatggcgacgagcaccttgttcagctcctcgccgggcgaccgcgtct 25011744 Query: 377 tctccccagtcaagtactccgttccaagctccttgcgcacgaaccggtagagcgggta 434 |||| || || | |||| | ||||| ||||||| |||||| |||||||| || ||||| Sbjct: 25011745 tctcgccggtgaggtacgcggttccgagctcctcgcgcacaaaccggtacagtgggta 25011802 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Plus Query: 403 agctccttgcgcacgaaccggtagagcgggtacgaccg 440 ||||||| ||| ||||| |||||||||||| ||||||| Sbjct: 24992401 agctcctcgcggacgaagcggtagagcgggaacgaccg 24992438
>dbj|AP005000.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0042D01 Length = 148305 Score = 133 bits (67), Expect = 6e-28 Identities = 157/187 (83%) Strand = Plus / Plus Query: 253 gttcagcagataggcaggggctcaccattccactccttcaggcactcaaggagcgcgtcg 312 ||||||||||| ||||||||||| || ||||||||||| |||||||| || | || |||| Sbjct: 38204 gttcagcagattggcaggggctcgccgttccactccttgaggcactcgagcaacgggtcg 38263 Query: 313 atgtgcttgccttggttcatggcaacgaacaccttgtccacctcttccccaggagaccgc 372 ||||||||||||| ||| || || || | ||||||| || ||| || ||||| || || Sbjct: 38264 atgtgcttgccttcgttgatagccacaagaaccttgttcagctcctcgccaggcgatcgt 38323 Query: 373 gtcttctccccagtcaagtactccgttccaagctccttgcgcacgaaccggtagagcggg 432 |||||||| || |||| ||||| ||||| ||||||| ||||||||||||||||||||| Sbjct: 38324 gtcttctcgccggtcaggtactttgttccgagctcctcgcgcacgaaccggtagagcgga 38383 Query: 433 tacgacc 439 ||||||| Sbjct: 38384 tacgacc 38390 Score = 119 bits (60), Expect = 9e-24 Identities = 156/188 (82%) Strand = Plus / Plus Query: 250 tctgttcagcagataggcaggggctcaccattccactccttcaggcactcaaggagcgcg 309 ||||||||||||| ||||| ||| | |||||||| ||||| ||||| || || |||| | Sbjct: 17058 tctgttcagcagagtggcagtggcgcgccattccattccttgaggcattcgagcagcggg 17117 Query: 310 tcgatgtgcttgccttggttcatggcaacgaacaccttgtccacctcttccccaggagac 369 ||||||||||||| | ||| ||||| |||| |||||||| || ||| || || || ||| Sbjct: 17118 tcgatgtgcttgcgctcgttgatggcgacgagcaccttgttcagctcctcgccgggcgac 17177 Query: 370 cgcgtcttctccccagtcaagtactccgttccaagctccttgcgcacgaaccggtagagc 429 ||||||||||| || || | |||||| || || | ||||| ||||||||||||||||||| Sbjct: 17178 cgcgtcttctcgccggtgaggtactcggtgccgacctcctcgcgcacgaaccggtagagc 17237 Query: 430 gggtacga 437 |||||||| Sbjct: 17238 gggtacga 17245 Score = 115 bits (58), Expect = 1e-22 Identities = 148/178 (83%) Strand = Plus / Plus Query: 257 agcagataggcaggggctcaccattccactccttcaggcactcaaggagcgcgtcgatgt 316 ||||||| ||||||||| | || ||||||||||| || |||||||| |||| || |||| Sbjct: 24613 agcagatgggcaggggcgcgccgttccactccttgagacactcaagcagcggatcaatgt 24672 Query: 317 gcttgccttggttcatggcaacgaacaccttgtccacctcttccccaggagaccgcgtct 376 ||||||||||||| ||||| |||| |||||||| || ||| || || || |||||||||| Sbjct: 24673 gcttgccttggttgatggcgacgagcaccttgttcagctcctcgccgggcgaccgcgtct 24732 Query: 377 tctccccagtcaagtactccgttccaagctccttgcgcacgaaccggtagagcgggta 434 |||| || || | |||| | ||||| ||||||| |||||| |||||||| || ||||| Sbjct: 24733 tctcgccggtgaggtacgcggttccgagctcctcgcgcacaaaccggtacagtgggta 24790 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Plus Query: 403 agctccttgcgcacgaaccggtagagcgggtacgaccg 440 ||||||| ||| ||||| |||||||||||| ||||||| Sbjct: 5389 agctcctcgcggacgaagcggtagagcgggaacgaccg 5426
>dbj|AK068993.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001A06, full insert sequence Length = 2406 Score = 133 bits (67), Expect = 6e-28 Identities = 157/187 (83%) Strand = Plus / Minus Query: 253 gttcagcagataggcaggggctcaccattccactccttcaggcactcaaggagcgcgtcg 312 ||||||||||| ||||||||||| || ||||||||||| |||||||| || | || |||| Sbjct: 2178 gttcagcagattggcaggggctcgccgttccactccttgaggcactcgagcaacgggtcg 2119 Query: 313 atgtgcttgccttggttcatggcaacgaacaccttgtccacctcttccccaggagaccgc 372 ||||||||||||| ||| || || || | ||||||| || ||| || ||||| || || Sbjct: 2118 atgtgcttgccttcgttgatagccacaagaaccttgttcagctcctcgccaggcgatcgt 2059 Query: 373 gtcttctccccagtcaagtactccgttccaagctccttgcgcacgaaccggtagagcggg 432 |||||||| || |||| ||||| ||||| ||||||| ||||||||||||||||||||| Sbjct: 2058 gtcttctcgccggtcaggtactttgttccgagctcctcgcgcacgaaccggtagagcgga 1999 Query: 433 tacgacc 439 ||||||| Sbjct: 1998 tacgacc 1992
>gb|AC135419.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0044P19, complete sequence Length = 176917 Score = 123 bits (62), Expect = 6e-25 Identities = 155/186 (83%) Strand = Plus / Plus Query: 252 tgttcagcagataggcaggggctcaccattccactccttcaggcactcaaggagcgcgtc 311 |||||||||||| ||||| ||| | || ||||||||||| |||||||| || |||| ||| Sbjct: 122618 tgttcagcagattggcagtggcgcgccgttccactccttgaggcactcgagcagcgggtc 122677 Query: 312 gatgtgcttgccttggttcatggcaacgaacaccttgtccacctcttccccaggagaccg 371 |||||||||||| ||||| || || |||| |||||||| | ||| || || || ||||| Sbjct: 122678 gatgtgcttgccctggttgatcgcgacgagcaccttgttgagctcctcgccgggcgaccg 122737 Query: 372 cgtcttctccccagtcaagtactccgttccaagctccttgcgcacgaaccggtagagcgg 431 ||||||||| || || | ||| | || || ||||||| ||||||||||||||||||||| Sbjct: 122738 cgtcttctcgccggtgaggtaggcggtgccgagctcctcgcgcacgaaccggtagagcgg 122797 Query: 432 gtacga 437 |||||| Sbjct: 122798 gtacga 122803
>gb|AC135429.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0636F09, complete sequence Length = 177374 Score = 123 bits (62), Expect = 6e-25 Identities = 155/186 (83%) Strand = Plus / Plus Query: 252 tgttcagcagataggcaggggctcaccattccactccttcaggcactcaaggagcgcgtc 311 |||||||||||| ||||| ||| | || ||||||||||| |||||||| || |||| ||| Sbjct: 65199 tgttcagcagattggcagtggcgcgccgttccactccttgaggcactcgagcagcgggtc 65258 Query: 312 gatgtgcttgccttggttcatggcaacgaacaccttgtccacctcttccccaggagaccg 371 |||||||||||| ||||| || || |||| |||||||| | ||| || || || ||||| Sbjct: 65259 gatgtgcttgccctggttgatcgcgacgagcaccttgttgagctcctcgccgggcgaccg 65318 Query: 372 cgtcttctccccagtcaagtactccgttccaagctccttgcgcacgaaccggtagagcgg 431 ||||||||| || || | ||| | || || ||||||| ||||||||||||||||||||| Sbjct: 65319 cgtcttctcgccggtgaggtaggcggtgccgagctcctcgcgcacgaaccggtagagcgg 65378 Query: 432 gtacga 437 |||||| Sbjct: 65379 gtacga 65384
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 123 bits (62), Expect = 6e-25 Identities = 155/186 (83%) Strand = Plus / Plus Query: 252 tgttcagcagataggcaggggctcaccattccactccttcaggcactcaaggagcgcgtc 311 |||||||||||| ||||| ||| | || ||||||||||| |||||||| || |||| ||| Sbjct: 20809394 tgttcagcagattggcagtggcgcgccgttccactccttgaggcactcgagcagcgggtc 20809453 Query: 312 gatgtgcttgccttggttcatggcaacgaacaccttgtccacctcttccccaggagaccg 371 |||||||||||| ||||| || || |||| |||||||| | ||| || || || ||||| Sbjct: 20809454 gatgtgcttgccctggttgatcgcgacgagcaccttgttgagctcctcgccgggcgaccg 20809513 Query: 372 cgtcttctccccagtcaagtactccgttccaagctccttgcgcacgaaccggtagagcgg 431 ||||||||| || || | ||| | || || ||||||| ||||||||||||||||||||| Sbjct: 20809514 cgtcttctcgccggtgaggtaggcggtgccgagctcctcgcgcacgaaccggtagagcgg 20809573 Query: 432 gtacga 437 |||||| Sbjct: 20809574 gtacga 20809579
>ref|XM_466845.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2369 Score = 119 bits (60), Expect = 9e-24 Identities = 156/188 (82%) Strand = Plus / Minus Query: 250 tctgttcagcagataggcaggggctcaccattccactccttcaggcactcaaggagcgcg 309 ||||||||||||| ||||| ||| | |||||||| ||||| ||||| || || |||| | Sbjct: 2311 tctgttcagcagagtggcagtggcgcgccattccattccttgaggcattcgagcagcggg 2252 Query: 310 tcgatgtgcttgccttggttcatggcaacgaacaccttgtccacctcttccccaggagac 369 ||||||||||||| | ||| ||||| |||| |||||||| || ||| || || || ||| Sbjct: 2251 tcgatgtgcttgcgctcgttgatggcgacgagcaccttgttcagctcctcgccgggcgac 2192 Query: 370 cgcgtcttctccccagtcaagtactccgttccaagctccttgcgcacgaaccggtagagc 429 ||||||||||| || || | |||||| || || | ||||| ||||||||||||||||||| Sbjct: 2191 cgcgtcttctcgccggtgaggtactcggtgccgacctcctcgcgcacgaaccggtagagc 2132 Query: 430 gggtacga 437 |||||||| Sbjct: 2131 gggtacga 2124
>dbj|AP006523.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1215B07 Length = 165957 Score = 119 bits (60), Expect = 9e-24 Identities = 156/188 (82%) Strand = Plus / Plus Query: 250 tctgttcagcagataggcaggggctcaccattccactccttcaggcactcaaggagcgcg 309 ||||||||||||| ||||| ||| | |||||||| ||||| ||||| || || |||| | Sbjct: 165353 tctgttcagcagagtggcagtggcgcgccattccattccttgaggcattcgagcagcggg 165412 Query: 310 tcgatgtgcttgccttggttcatggcaacgaacaccttgtccacctcttccccaggagac 369 ||||||||||||| | ||| ||||| |||| |||||||| || ||| || || || ||| Sbjct: 165413 tcgatgtgcttgcgctcgttgatggcgacgagcaccttgttcagctcctcgccgggcgac 165472 Query: 370 cgcgtcttctccccagtcaagtactccgttccaagctccttgcgcacgaaccggtagagc 429 ||||||||||| || || | |||||| || || | ||||| ||||||||||||||||||| Sbjct: 165473 cgcgtcttctcgccggtgaggtactcggtgccgacctcctcgcgcacgaaccggtagagc 165532 Query: 430 gggtacga 437 |||||||| Sbjct: 165533 gggtacga 165540 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Plus Query: 403 agctccttgcgcacgaaccggtagagcgggtacgaccg 440 ||||||| ||| ||||| |||||||||||| ||||||| Sbjct: 153684 agctcctcgcggacgaagcggtagagcgggaacgaccg 153721
>dbj|AK120127.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013026F02, full insert sequence Length = 2594 Score = 119 bits (60), Expect = 9e-24 Identities = 156/188 (82%) Strand = Plus / Minus Query: 250 tctgttcagcagataggcaggggctcaccattccactccttcaggcactcaaggagcgcg 309 ||||||||||||| ||||| ||| | |||||||| ||||| ||||| || || |||| | Sbjct: 2311 tctgttcagcagagtggcagtggcgcgccattccattccttgaggcattcgagcagcggg 2252 Query: 310 tcgatgtgcttgccttggttcatggcaacgaacaccttgtccacctcttccccaggagac 369 ||||||||||||| | ||| ||||| |||| |||||||| || ||| || || || ||| Sbjct: 2251 tcgatgtgcttgcgctcgttgatggcgacgagcaccttgttcagctcctcgccgggcgac 2192 Query: 370 cgcgtcttctccccagtcaagtactccgttccaagctccttgcgcacgaaccggtagagc 429 ||||||||||| || || | |||||| || || | ||||| ||||||||||||||||||| Sbjct: 2191 cgcgtcttctcgccggtgaggtactcggtgccgacctcctcgcgcacgaaccggtagagc 2132 Query: 430 gggtacga 437 |||||||| Sbjct: 2131 gggtacga 2124
>emb|Z15085.1|OSGP28G O.sativa GP28 gene (partial) Length = 4843 Score = 119 bits (60), Expect = 9e-24 Identities = 156/188 (82%) Strand = Plus / Minus Query: 250 tctgttcagcagataggcaggggctcaccattccactccttcaggcactcaaggagcgcg 309 ||||||||||||| ||||| ||| | |||||||| ||||| ||||| || || |||| | Sbjct: 4740 tctgttcagcagagtggcagtggcgcgccattccattccttgaggcattcgagcagcggg 4681 Query: 310 tcgatgtgcttgccttggttcatggcaacgaacaccttgtccacctcttccccaggagac 369 ||||||||||||| | ||| ||||| |||| |||||||| || ||| || || || ||| Sbjct: 4680 tcgatgtgcttgcgctcgttgatggcgacgagcaccttgttcagctcctcgccgggcgac 4621 Query: 370 cgcgtcttctccccagtcaagtactccgttccaagctccttgcgcacgaaccggtagagc 429 ||||||||||| || || | |||||| || || | ||||| ||||||||||||||||||| Sbjct: 4620 cgcgtcttctcgccggtgaggtactcggtgccgacctcctcgcgcacgaaccggtagagc 4561 Query: 430 gggtacga 437 |||||||| Sbjct: 4560 gggtacga 4553
>dbj|AK065208.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002F15, full insert sequence Length = 1835 Score = 119 bits (60), Expect = 9e-24 Identities = 156/188 (82%) Strand = Plus / Minus Query: 250 tctgttcagcagataggcaggggctcaccattccactccttcaggcactcaaggagcgcg 309 ||||||||||||| ||||| ||| | |||||||| ||||| ||||| || || |||| | Sbjct: 1552 tctgttcagcagagtggcagtggcgcgccattccattccttgaggcattcgagcagcggg 1493 Query: 310 tcgatgtgcttgccttggttcatggcaacgaacaccttgtccacctcttccccaggagac 369 ||||||||||||| | ||| ||||| |||| |||||||| || ||| || || || ||| Sbjct: 1492 tcgatgtgcttgcgctcgttgatggcgacgagcaccttgttcagctcctcgccgggcgac 1433 Query: 370 cgcgtcttctccccagtcaagtactccgttccaagctccttgcgcacgaaccggtagagc 429 ||||||||||| || || | |||||| || || | ||||| ||||||||||||||||||| Sbjct: 1432 cgcgtcttctcgccggtgaggtactcggtgccgacctcctcgcgcacgaaccggtagagc 1373 Query: 430 gggtacga 437 |||||||| Sbjct: 1372 gggtacga 1365
>dbj|AK061959.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-G01, full insert sequence Length = 1589 Score = 119 bits (60), Expect = 9e-24 Identities = 156/188 (82%) Strand = Plus / Minus Query: 250 tctgttcagcagataggcaggggctcaccattccactccttcaggcactcaaggagcgcg 309 ||||||||||||| ||||| ||| | |||||||| ||||| ||||| || || |||| | Sbjct: 1268 tctgttcagcagagtggcagtggcgcgccattccattccttgaggcattcgagcagcggg 1209 Query: 310 tcgatgtgcttgccttggttcatggcaacgaacaccttgtccacctcttccccaggagac 369 ||||||||||||| | ||| ||||| |||| |||||||| || ||| || || || ||| Sbjct: 1208 tcgatgtgcttgcgctcgttgatggcgacgagcaccttgttcagctcctcgccgggcgac 1149 Query: 370 cgcgtcttctccccagtcaagtactccgttccaagctccttgcgcacgaaccggtagagc 429 ||||||||||| || || | |||||| || || | ||||| ||||||||||||||||||| Sbjct: 1148 cgcgtcttctcgccggtgaggtactcggtgccgacctcctcgcgcacgaaccggtagagc 1089 Query: 430 gggtacga 437 |||||||| Sbjct: 1088 gggtacga 1081
>ref|XM_475254.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2151 Score = 117 bits (59), Expect = 3e-23 Identities = 152/183 (83%) Strand = Plus / Minus Query: 255 tcagcagataggcaggggctcaccattccactccttcaggcactcaaggagcgcgtcgat 314 ||||||||| ||||| ||| | || ||||||||||| |||||||| || |||| |||||| Sbjct: 2151 tcagcagattggcagtggcgcgccgttccactccttgaggcactcgagcagcgggtcgat 2092 Query: 315 gtgcttgccttggttcatggcaacgaacaccttgtccacctcttccccaggagaccgcgt 374 ||||||||| ||||| || || |||| |||||||| | ||| || || || |||||||| Sbjct: 2091 gtgcttgccctggttgatcgcgacgagcaccttgttgagctcctcgccgggcgaccgcgt 2032 Query: 375 cttctccccagtcaagtactccgttccaagctccttgcgcacgaaccggtagagcgggta 434 |||||| || || | ||| | || || ||||||| |||||||||||||||||||||||| Sbjct: 2031 cttctcgccggtgaggtaggcggtgccgagctcctcgcgcacgaaccggtagagcgggta 1972 Query: 435 cga 437 ||| Sbjct: 1971 cga 1969
>ref|XM_466846.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2142 Score = 115 bits (58), Expect = 1e-22 Identities = 148/178 (83%) Strand = Plus / Minus Query: 257 agcagataggcaggggctcaccattccactccttcaggcactcaaggagcgcgtcgatgt 316 ||||||| ||||||||| | || ||||||||||| || |||||||| |||| || |||| Sbjct: 2140 agcagatgggcaggggcgcgccgttccactccttgagacactcaagcagcggatcaatgt 2081 Query: 317 gcttgccttggttcatggcaacgaacaccttgtccacctcttccccaggagaccgcgtct 376 ||||||||||||| ||||| |||| |||||||| || ||| || || || |||||||||| Sbjct: 2080 gcttgccttggttgatggcgacgagcaccttgttcagctcctcgccgggcgaccgcgtct 2021 Query: 377 tctccccagtcaagtactccgttccaagctccttgcgcacgaaccggtagagcgggta 434 |||| || || | |||| | ||||| ||||||| |||||| |||||||| || ||||| Sbjct: 2020 tctcgccggtgaggtacgcggttccgagctcctcgcgcacaaaccggtacagtgggta 1963
>gb|AY360388.2| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0038J12, complete sequence Length = 131944 Score = 115 bits (58), Expect = 1e-22 Identities = 113/131 (86%), Gaps = 4/131 (3%) Strand = Plus / Plus Query: 313 atgtgcttgccttggttcatggcaacgaacaccttgtccacctcttccccaggagaccgc 372 ||||||||| | ||||||||||| ||||||||||||| ||| || || ||||| |||||| Sbjct: 111329 atgtgcttgacctggttcatggcgacgaacaccttgttcacatcctcgccaggtgaccgc 111388 Query: 373 gtc----ttctccccagtcaagtactccgttccaagctccttgcgcacgaaccggtagag 428 ||| |||||||||||||||||||| | || ||||||||||| |||||||||||||| Sbjct: 111389 gtcgatcttctccccagtcaagtactctatcccgagctccttgcggacgaaccggtagag 111448 Query: 429 cgggtacgacc 439 || |||||||| Sbjct: 111449 cgagtacgacc 111459 Score = 97.6 bits (49), Expect = 3e-17 Identities = 113/134 (84%), Gaps = 4/134 (2%) Strand = Plus / Plus Query: 309 gtcgatgtgcttgccttggttcatggcaacgaacaccttgtccacctcttccccaggaga 368 ||||||||||||||| ||||||||||| ||||||||||||| ||| || || || || || Sbjct: 111851 gtcgatgtgcttgccctggttcatggcgacgaacaccttgttcacgtcctcaccgggcga 111910 Query: 369 ccgcg----tcttctccccagtcaagtactccgttccaagctccttgcgcacgaaccggt 424 ||||| |||||| ||| ||||||||||| || | |||||||||| |||||||||| Sbjct: 111911 ccgcgtcgatcttcttcccggtcaagtactctgtcctgagctccttgcagacgaaccggt 111970 Query: 425 agagcgggtacgac 438 |||||| ||||||| Sbjct: 111971 agagcgagtacgac 111984
>gb|AY360389.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0024A05, complete sequence Length = 82985 Score = 115 bits (58), Expect = 1e-22 Identities = 113/131 (86%), Gaps = 4/131 (3%) Strand = Plus / Plus Query: 313 atgtgcttgccttggttcatggcaacgaacaccttgtccacctcttccccaggagaccgc 372 ||||||||| | ||||||||||| ||||||||||||| ||| || || ||||| |||||| Sbjct: 5848 atgtgcttgacctggttcatggcgacgaacaccttgttcacatcctcgccaggtgaccgc 5907 Query: 373 gtc----ttctccccagtcaagtactccgttccaagctccttgcgcacgaaccggtagag 428 ||| |||||||||||||||||||| | || ||||||||||| |||||||||||||| Sbjct: 5908 gtcgatcttctccccagtcaagtactctatcccgagctccttgcggacgaaccggtagag 5967 Query: 429 cgggtacgacc 439 || |||||||| Sbjct: 5968 cgagtacgacc 5978 Score = 97.6 bits (49), Expect = 3e-17 Identities = 113/134 (84%), Gaps = 4/134 (2%) Strand = Plus / Plus Query: 309 gtcgatgtgcttgccttggttcatggcaacgaacaccttgtccacctcttccccaggaga 368 ||||||||||||||| ||||||||||| ||||||||||||| ||| || || || || || Sbjct: 6370 gtcgatgtgcttgccctggttcatggcgacgaacaccttgttcacgtcctcaccgggcga 6429 Query: 369 ccgcg----tcttctccccagtcaagtactccgttccaagctccttgcgcacgaaccggt 424 ||||| |||||| ||| ||||||||||| || | |||||||||| |||||||||| Sbjct: 6430 ccgcgtcgatcttcttcccggtcaagtactctgtcctgagctccttgcagacgaaccggt 6489 Query: 425 agagcgggtacgac 438 |||||| ||||||| Sbjct: 6490 agagcgagtacgac 6503
>gb|AY450643.1| Bambusa oldhamii phenylalanine ammonia-lyase (PAL1) mRNA, complete cds Length = 2139 Score = 115 bits (58), Expect = 1e-22 Identities = 154/186 (82%) Strand = Plus / Minus Query: 255 tcagcagataggcaggggctcaccattccactccttcaggcactcaaggagcgcgtcgat 314 ||||||||| ||||| ||||| || ||||||||||| ||||||||||| |||| ||| || Sbjct: 2139 tcagcagatgggcagtggctcgccgttccactccttgaggcactcaagcagcgggtcaat 2080 Query: 315 gtgcttgccttggttcatggcaacgaacaccttgtccacctcttccccaggagaccgcgt 374 ||||||||| ||||| ||||| | || |||||||| || ||| || || || ||||| || Sbjct: 2079 gtgcttgccctggttgatggcgaggagcaccttgttcagctcctcgcccggcgaccgtgt 2020 Query: 375 cttctccccagtcaagtactccgttccaagctccttgcgcacgaaccggtagagcgggta 434 |||||| || || | ||||||||| || ||||||| ||| || |||||||| || || || Sbjct: 2019 cttctcgccggtgaggtactccgtcccgagctcctcgcgtacaaaccggtacaggggata 1960 Query: 435 cgaccg 440 |||||| Sbjct: 1959 cgaccg 1954
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 115 bits (58), Expect = 1e-22 Identities = 113/131 (86%), Gaps = 4/131 (3%) Strand = Plus / Minus Query: 313 atgtgcttgccttggttcatggcaacgaacaccttgtccacctcttccccaggagaccgc 372 ||||||||| | ||||||||||| ||||||||||||| ||| || || ||||| |||||| Sbjct: 12907842 atgtgcttgacctggttcatggcgacgaacaccttgttcacatcctcgccaggtgaccgc 12907783 Query: 373 gtc----ttctccccagtcaagtactccgttccaagctccttgcgcacgaaccggtagag 428 ||| |||||||||||||||||||| | || ||||||||||| |||||||||||||| Sbjct: 12907782 gtcgatcttctccccagtcaagtactctatcccgagctccttgcggacgaaccggtagag 12907723 Query: 429 cgggtacgacc 439 || |||||||| Sbjct: 12907722 cgagtacgacc 12907712 Score = 97.6 bits (49), Expect = 3e-17 Identities = 113/134 (84%), Gaps = 4/134 (2%) Strand = Plus / Minus Query: 309 gtcgatgtgcttgccttggttcatggcaacgaacaccttgtccacctcttccccaggaga 368 ||||||||||||||| ||||||||||| ||||||||||||| ||| || || || || || Sbjct: 12907320 gtcgatgtgcttgccctggttcatggcgacgaacaccttgttcacgtcctcaccgggcga 12907261 Query: 369 ccgcg----tcttctccccagtcaagtactccgttccaagctccttgcgcacgaaccggt 424 ||||| |||||| ||| ||||||||||| || | |||||||||| |||||||||| Sbjct: 12907260 ccgcgtcgatcttcttcccggtcaagtactctgtcctgagctccttgcagacgaaccggt 12907201 Query: 425 agagcgggtacgac 438 |||||| ||||||| Sbjct: 12907200 agagcgagtacgac 12907187
>dbj|AP006480.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone: B1052H09 Length = 190806 Score = 115 bits (58), Expect = 1e-22 Identities = 113/131 (86%), Gaps = 4/131 (3%) Strand = Plus / Minus Query: 313 atgtgcttgccttggttcatggcaacgaacaccttgtccacctcttccccaggagaccgc 372 ||||||||| | ||||||||||| ||||||||||||| ||| || || ||||| |||||| Sbjct: 44822 atgtgcttgacctggttcatggcgacgaacaccttgttcacatcctcgccaggtgaccgc 44763 Query: 373 gtc----ttctccccagtcaagtactccgttccaagctccttgcgcacgaaccggtagag 428 ||| |||||||||||||||||||| | || ||||||||||| |||||||||||||| Sbjct: 44762 gtcgatcttctccccagtcaagtactctatcccgagctccttgcggacgaaccggtagag 44703 Query: 429 cgggtacgacc 439 || |||||||| Sbjct: 44702 cgagtacgacc 44692 Score = 97.6 bits (49), Expect = 3e-17 Identities = 113/134 (84%), Gaps = 4/134 (2%) Strand = Plus / Minus Query: 309 gtcgatgtgcttgccttggttcatggcaacgaacaccttgtccacctcttccccaggaga 368 ||||||||||||||| ||||||||||| ||||||||||||| ||| || || || || || Sbjct: 44300 gtcgatgtgcttgccctggttcatggcgacgaacaccttgttcacgtcctcaccgggcga 44241 Query: 369 ccgcg----tcttctccccagtcaagtactccgttccaagctccttgcgcacgaaccggt 424 ||||| |||||| ||| ||||||||||| || | |||||||||| |||||||||| Sbjct: 44240 ccgcgtcgatcttcttcccggtcaagtactctgtcctgagctccttgcagacgaaccggt 44181 Query: 425 agagcgggtacgac 438 |||||| ||||||| Sbjct: 44180 agagcgagtacgac 44167
>dbj|AP005693.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0061E21 Length = 155085 Score = 115 bits (58), Expect = 1e-22 Identities = 113/131 (86%), Gaps = 4/131 (3%) Strand = Plus / Minus Query: 313 atgtgcttgccttggttcatggcaacgaacaccttgtccacctcttccccaggagaccgc 372 ||||||||| | ||||||||||| ||||||||||||| ||| || || ||||| |||||| Sbjct: 108360 atgtgcttgacctggttcatggcgacgaacaccttgttcacatcctcgccaggtgaccgc 108301 Query: 373 gtc----ttctccccagtcaagtactccgttccaagctccttgcgcacgaaccggtagag 428 ||| |||||||||||||||||||| | || ||||||||||| |||||||||||||| Sbjct: 108300 gtcgatcttctccccagtcaagtactctatcccgagctccttgcggacgaaccggtagag 108241 Query: 429 cgggtacgacc 439 || |||||||| Sbjct: 108240 cgagtacgacc 108230 Score = 97.6 bits (49), Expect = 3e-17 Identities = 113/134 (84%), Gaps = 4/134 (2%) Strand = Plus / Minus Query: 309 gtcgatgtgcttgccttggttcatggcaacgaacaccttgtccacctcttccccaggaga 368 ||||||||||||||| ||||||||||| ||||||||||||| ||| || || || || || Sbjct: 107838 gtcgatgtgcttgccctggttcatggcgacgaacaccttgttcacgtcctcaccgggcga 107779 Query: 369 ccgcg----tcttctccccagtcaagtactccgttccaagctccttgcgcacgaaccggt 424 ||||| |||||| ||| ||||||||||| || | |||||||||| |||||||||| Sbjct: 107778 ccgcgtcgatcttcttcccggtcaagtactctgtcctgagctccttgcagacgaaccggt 107719 Query: 425 agagcgggtacgac 438 |||||| ||||||| Sbjct: 107718 agagcgagtacgac 107705
>gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0026K20 map S10559, complete sequence Length = 115996 Score = 113 bits (57), Expect = 5e-22 Identities = 120/141 (85%) Strand = Plus / Minus Query: 312 gatgtgcttgccttggttcatggcaacgaacaccttgtccacctcttccccaggagaccg 371 |||||||||| ||||||||||| | | ||||||||||||||| ||||| |||||||| Sbjct: 110577 gatgtgcttgtgctggttcatggcgatcaccaccttgtccacctcctccccgggagaccg 110518 Query: 372 cgtcttctccccagtcaagtactccgttccaagctccttgcgcacgaaccggtagagcgg 431 ||||||||| || |||| |||||| | || ||||||||||||||||||| ||| ||||| Sbjct: 110517 cgtcttctcgccggtcaggtactcggcgccgagctccttgcgcacgaacctgtacagcgg 110458 Query: 432 gtacgaccgacattcggagat 452 |||||| || || |||||||| Sbjct: 110457 gtacgagcggcagtcggagat 110437
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 113 bits (57), Expect = 5e-22 Identities = 120/141 (85%) Strand = Plus / Minus Query: 312 gatgtgcttgccttggttcatggcaacgaacaccttgtccacctcttccccaggagaccg 371 |||||||||| ||||||||||| | | ||||||||||||||| ||||| |||||||| Sbjct: 28380645 gatgtgcttgtgctggttcatggcgatcaccaccttgtccacctcctccccgggagaccg 28380586 Query: 372 cgtcttctccccagtcaagtactccgttccaagctccttgcgcacgaaccggtagagcgg 431 ||||||||| || |||| |||||| | || ||||||||||||||||||| ||| ||||| Sbjct: 28380585 cgtcttctcgccggtcaggtactcggcgccgagctccttgcgcacgaacctgtacagcgg 28380526 Query: 432 gtacgaccgacattcggagat 452 |||||| || || |||||||| Sbjct: 28380525 gtacgagcggcagtcggagat 28380505
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 113 bits (57), Expect = 5e-22 Identities = 120/141 (85%) Strand = Plus / Minus Query: 312 gatgtgcttgccttggttcatggcaacgaacaccttgtccacctcttccccaggagaccg 371 |||||||||| ||||||||||| | | ||||||||||||||| ||||| |||||||| Sbjct: 28363094 gatgtgcttgtgctggttcatggcgatcaccaccttgtccacctcctccccgggagaccg 28363035 Query: 372 cgtcttctccccagtcaagtactccgttccaagctccttgcgcacgaaccggtagagcgg 431 ||||||||| || |||| |||||| | || ||||||||||||||||||| ||| ||||| Sbjct: 28363034 cgtcttctcgccggtcaggtactcggcgccgagctccttgcgcacgaacctgtacagcgg 28362975 Query: 432 gtacgaccgacattcggagat 452 |||||| || || |||||||| Sbjct: 28362974 gtacgagcggcagtcggagat 28362954
>gb|AY005474.1| Triticum aestivum inducible phenylalanine ammonia-lyase mRNA, partial cds Length = 1933 Score = 111 bits (56), Expect = 2e-21 Identities = 149/180 (82%) Strand = Plus / Minus Query: 255 tcagcagataggcaggggctcaccattccactccttcaggcactcaaggagcgcgtcgat 314 |||||||| ||||||||||| || ||||||||||| |||||||| || |||| |||||| Sbjct: 1635 tcagcagagcggcaggggctcgccgttccactccttgaggcactccagcagcgggtcgat 1576 Query: 315 gtgcttgccttggttcatggcaacgaacaccttgtccacctcttccccaggagaccgcgt 374 |||||||| | ||||||||| || | |||||||| || ||| ||||| || || ||||| Sbjct: 1575 gtgcttgcgctcgttcatggccaccagcaccttgttcagctcctccccgggcgaacgcgt 1516 Query: 375 cttctccccagtcaagtactccgttccaagctccttgcgcacgaaccggtagagcgggta 434 |||||| || |||| ||||||||| || | ||| |||||||||| |||| |||||||| Sbjct: 1515 cttctcgccggtcaggtactccgtgccgcacacctcgcgcacgaactggtacagcgggta 1456
>emb|BX000456.3|CNS08CDD Oryza sativa chromosome 12, . BAC OSJNBa0050D07 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 185820 Score = 109 bits (55), Expect = 8e-21 Identities = 148/179 (82%) Strand = Plus / Plus Query: 265 ggcaggggctcaccattccactccttcaggcactcaaggagcgcgtcgatgtgcttgcct 324 ||||||||| | || |||||||| | |||||||| || || | || |||||||||| Sbjct: 175769 ggcaggggcgcgcctttccactcgctgaggcactccagcagtgggttgatgtgcttgtgc 175828 Query: 325 tggttcatggcaacgaacaccttgtccacctcttccccaggagaccgcgtcttctcccca 384 ||||||||||| | | ||||||||||||||| ||||| || |||||||||||||| || Sbjct: 175829 tggttcatggcgatcaccaccttgtccacctcctccccgggcgaccgcgtcttctcgccg 175888 Query: 385 gtcaagtactccgttccaagctccttgcgcacgaaccggtagagcgggtacgaccgaca 443 |||| |||||| | || ||||||||||||||||||| ||| ||||||||||| ||||| Sbjct: 175889 gtcaggtactcggcgccgagctccttgcgcacgaacctgtacagcgggtacgagcgaca 175947
>gb|BT018802.1| Zea mays clone EL01N0529D05.d mRNA sequence Length = 1451 Score = 99.6 bits (50), Expect = 8e-18 Identities = 152/186 (81%) Strand = Plus / Minus Query: 255 tcagcagataggcaggggctcaccattccactccttcaggcactcaaggagcgcgtcgat 314 |||||||| ||||||||| | || ||||||||||| |||||||| || |||| |||||| Sbjct: 1126 tcagcagagcggcaggggcgcgccgttccactccttgaggcactcgagcagcgggtcgat 1067 Query: 315 gtgcttgccttggttcatggcaacgaacaccttgtccacctcttccccaggagaccgcgt 374 |||||||| ||||| ||||| |||| |||||||| | ||| || || || |||| || Sbjct: 1066 gtgcttgcgctggttgatggccacgagcaccttgttgagctcctcgccgggggacctggt 1007 Query: 375 cttctccccagtcaagtactccgttccaagctccttgcgcacgaaccggtagagcgggta 434 | |||| || |||| |||||| || || | ||||| ||||||||||||||| |||||||| Sbjct: 1006 cctctcgccggtcaggtactcggtgccgacctcctcgcgcacgaaccggtacagcgggta 947 Query: 435 cgaccg 440 ||||| Sbjct: 946 ggaccg 941
>gb|AY104679.1| Zea mays PCO142078 mRNA sequence Length = 1864 Score = 91.7 bits (46), Expect = 2e-15 Identities = 151/186 (81%) Strand = Plus / Minus Query: 255 tcagcagataggcaggggctcaccattccactccttcaggcactcaaggagcgcgtcgat 314 |||||||| ||||||||| | || ||||||||||| |||||||| || |||| |||||| Sbjct: 1572 tcagcagagcggcaggggcgcgccgttccactccttgaggcactcgagcagcgggtcgat 1513 Query: 315 gtgcttgccttggttcatggcaacgaacaccttgtccacctcttccccaggagaccgcgt 374 |||||||| ||||| ||||| |||| |||||||| | ||| || || || |||| || Sbjct: 1512 gtgcttgcgctggttgatggccacgagcaccttgttgagctcctcgccgggggacctggt 1453 Query: 375 cttctccccagtcaagtactccgttccaagctccttgcgcacgaaccggtagagcgggta 434 | |||| || |||| |||||| || || | |||| ||||||||||||||| |||||||| Sbjct: 1452 cctctcgccggtcaggtactcggtgccgacgtcctcgcgcacgaaccggtacagcgggta 1393 Query: 435 cgaccg 440 ||||| Sbjct: 1392 ggaccg 1387
>ref|XM_473192.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2124 Score = 63.9 bits (32), Expect = 4e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 255 tcagcagataggcaggggctcaccattccactccttcaggcactcaaggagcgcgtcgat 314 ||||||||| ||||||||||| || ||||||||||| |||||||| || | || |||||| Sbjct: 2124 tcagcagatgggcaggggctcgccgttccactccttgaggcactcgagcatcgggtcgat 2065 Query: 315 gtgcttgc 322 | |||||| Sbjct: 2064 gagcttgc 2057
>gb|AY224546.1| Oryza sativa (japonica cultivar-group) isolate 24080 phenylalanine ammonia-lyase mRNA, complete cds Length = 2016 Score = 63.9 bits (32), Expect = 4e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 255 tcagcagataggcaggggctcaccattccactccttcaggcactcaaggagcgcgtcgat 314 ||||||||| ||||||||||| || ||||||||||| |||||||| || | || |||||| Sbjct: 2016 tcagcagatgggcaggggctcgccgttccactccttgaggcactcgagcatcgggtcgat 1957 Query: 315 gtgcttgc 322 | |||||| Sbjct: 1956 gagcttgc 1949
>dbj|AK100346.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023082J11, full insert sequence Length = 2510 Score = 63.9 bits (32), Expect = 4e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 255 tcagcagataggcaggggctcaccattccactccttcaggcactcaaggagcgcgtcgat 314 ||||||||| ||||||||||| || ||||||||||| |||||||| || | || |||||| Sbjct: 2216 tcagcagatgggcaggggctcgccgttccactccttgaggcactcgagcatcgggtcgat 2157 Query: 315 gtgcttgc 322 | |||||| Sbjct: 2156 gagcttgc 2149
>emb|X99482.1|HVPAL4 H.vulgare mRNA for phenylalanine ammonia-lyase, pal4 Length = 1344 Score = 54.0 bits (27), Expect = 4e-04 Identities = 63/75 (84%) Strand = Plus / Minus Query: 54 cccttttaacttacatcataaaagttctactggctacccaacactaccaggtcatgcaat 113 |||||||||| |||||| || | |||||||||||||| | |||||||| |||||||| Sbjct: 1277 cccttttaacctacatcgtagagattctactggctacctaccactaccaaagcatgcaat 1218 Query: 114 tgcaatctttagcaa 128 |||||| ||| |||| Sbjct: 1217 tgcaatttttggcaa 1203 Score = 50.1 bits (25), Expect = 0.007 Identities = 65/77 (84%), Gaps = 1/77 (1%) Strand = Plus / Minus Query: 257 agcagataggcaggggctcaccattccactccttcaggcactcaaggagcgcgtcg-atg 315 |||||||||||||||||||||| | | || | | || |||||||| || |||||| ||| Sbjct: 1057 agcagataggcaggggctcaccgtccaacccttagagacactcaagcagtgcgtcgaatg 998 Query: 316 tgcttgccttggttcat 332 |||||||||| |||||| Sbjct: 997 tgcttgcctttgttcat 981
>gb|AY973992.1| Bambusa ventricosa putative phenylalanine ammonia-lyase mRNA, complete cds Length = 2353 Score = 50.1 bits (25), Expect = 0.007 Identities = 70/85 (82%) Strand = Plus / Minus Query: 265 ggcaggggctcaccattccactccttcaggcactcaaggagcgcgtcgatgtgcttgcct 324 ||||||||||| || ||||||||||| |||||||| || | | ||||||| ||||||| Sbjct: 2097 ggcaggggctcgccgttccactccttgaggcactcgagcatggggtcgatgagcttgccc 2038 Query: 325 tggttcatggcaacgaacaccttgt 349 ||| | ||| | | ||||||||||| Sbjct: 2037 tggctgatgccgatgaacaccttgt 2013
>gb|AF237954.1|AF237954 Rubus idaeus phenylalanine ammonia-lyase 1 (PAL1) mRNA, complete cds Length = 2501 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Minus Query: 262 ataggcaggggctcaccattccactccttca 292 ||||||||||| |||||||||||||||||| Sbjct: 2251 ataggcaggggagcaccattccactccttca 2221
>emb|Z49146.1|HVPAL3MR H.vulgare partial PAL mRNA for phenylalanine ammonia-lyase (1831 bp) Length = 1831 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Minus Query: 265 ggcaggggctcaccattccactccttcaggcactc 299 ||||||||||| || ||||||||||| |||||||| Sbjct: 1483 ggcaggggctcgccgttccactccttgaggcactc 1449
>ref|XM_466843.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2502 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Minus Query: 403 agctccttgcgcacgaaccggtagagcgggtacgaccg 440 ||||||| ||| ||||| |||||||||||| ||||||| Sbjct: 2044 agctcctcgcggacgaagcggtagagcgggaacgaccg 2007
>emb|X16099.1|OSPAL Rice gene for phenylalanine ammonia-lyase (EC 4.3.1.5) Length = 4412 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Minus Query: 403 agctccttgcgcacgaaccggtagagcgggtacgaccg 440 ||||||| ||| ||||| |||||||||||| ||||||| Sbjct: 3921 agctcctcgcggacgaagcggtagagcgggaacgaccg 3884
>dbj|AK102817.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108N04, full insert sequence Length = 2504 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Minus Query: 403 agctccttgcgcacgaaccggtagagcgggtacgaccg 440 ||||||| ||| ||||| |||||||||||| ||||||| Sbjct: 2046 agctcctcgcggacgaagcggtagagcgggaacgaccg 2009
>dbj|AK067923.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013126B03, full insert sequence Length = 1531 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Minus Query: 403 agctccttgcgcacgaaccggtagagcgggtacgaccg 440 ||||||| ||| ||||| |||||||||||| ||||||| Sbjct: 1073 agctcctcgcggacgaagcggtagagcgggaacgaccg 1036
>dbj|AK058306.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H03, full insert sequence Length = 1298 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Minus Query: 403 agctccttgcgcacgaaccggtagagcgggtacgaccg 440 ||||||| ||| ||||| |||||||||||| ||||||| Sbjct: 838 agctcctcgcggacgaagcggtagagcgggaacgaccg 801
>gb|AC148324.2| Mus musculus BAC clone RP24-454N4 from chromosome 12, complete sequence Length = 183478 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 273 ctcaccattccactccttcag 293 ||||||||||||||||||||| Sbjct: 86984 ctcaccattccactccttcag 86964
>gb|AC122378.4| Mus musculus BAC clone RP23-474C9 from chromosome 15, complete sequence Length = 203662 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 20 cagtatatttatcatgaaaacttat 44 |||||||||||||||||||| |||| Sbjct: 123273 cagtatatttatcatgaaaatttat 123297
>dbj|BA000032.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 2, complete sequence Length = 1877212 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 153 tcgcaaacatcaacttggaga 173 ||||||||||||||||||||| Sbjct: 510262 tcgcaaacatcaacttggaga 510242
>gb|AC092506.3| Homo sapiens chromosome 1 clone RP11-364B6, complete sequence Length = 198279 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 4 ttttactttctggaaccagtatatt 28 ||||||||||||||||||| ||||| Sbjct: 141931 ttttactttctggaaccaggatatt 141907
>gb|AC026387.7|AC026387 Mus musculus 11 BAC RP23-476H9 (Roswell Park Cancer Institute Mouse BAC Library) complete sequence Length = 204318 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 273 ctcaccattccactccttcag 293 ||||||||||||||||||||| Sbjct: 13154 ctcaccattccactccttcag 13174
>gb|AC106733.3| Homo sapiens chromosome 16 clone CTD-2300H10, complete sequence Length = 98391 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 450 gatacggttttgctgtgctgc 470 ||||||||||||||||||||| Sbjct: 51794 gatacggttttgctgtgctgc 51774
>gb|AF100336.1|AF100336 Dendrobium grex Madame Thong-IN putative phenylalanine ammonia-lyase (ovg43) mRNA, partial cds Length = 402 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 275 caccattccactccttcaggcactc 299 |||||||||||||||||| |||||| Sbjct: 151 caccattccactccttcaagcactc 127
>ref|XM_522645.1| PREDICTED: Pan troglodytes LOC467247 (LOC467247), mRNA Length = 1545 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 tcatcactggagccttctga 214 |||||||||||||||||||| Sbjct: 210 tcatcactggagccttctga 229
>gb|AE008446.1| Streptococcus pneumoniae R6 section 62 of 184 of the complete genome Length = 11482 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 ctactcttccatttctggat 247 |||||||||||||||||||| Sbjct: 723 ctactcttccatttctggat 704
>gb|AY661656.1| Sorghum bicolor clone BAC 88M4, complete sequence Length = 279448 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 235 tccatttctggatcctctgttcag 258 ||||||||||| |||||||||||| Sbjct: 48030 tccatttctgggtcctctgttcag 48007
>gb|AC147175.2| Xenopus tropicalis clone CH216-54E8, complete sequence Length = 187921 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 aattgcaatctttagcaatg 130 |||||||||||||||||||| Sbjct: 43842 aattgcaatctttagcaatg 43823
>ref|XM_723578.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY01095) partial mRNA Length = 2052 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 cttttaacttacatcataaa 75 |||||||||||||||||||| Sbjct: 1357 cttttaacttacatcataaa 1376
>ref|XM_674857.1| Plasmodium berghei strain ANKA hypothetical protein (PB103275.00.0) partial mRNA Length = 1818 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 cttttaacttacatcataaa 75 |||||||||||||||||||| Sbjct: 1363 cttttaacttacatcataaa 1382
>gb|AC096070.7| Rattus norvegicus 4 BAC CH230-20J7 (Children's Hospital Oakland Research Institute) complete sequence Length = 231332 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 atgaaaacttatcacacagt 52 |||||||||||||||||||| Sbjct: 193834 atgaaaacttatcacacagt 193815
>gb|AC121515.3| Rattus norvegicus strain Brown Norway clone RP31-425H6, complete sequence Length = 152757 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 atgaaaacttatcacacagt 52 |||||||||||||||||||| Sbjct: 118563 atgaaaacttatcacacagt 118582
>gb|AC011328.11| Homo sapiens chromosome 10 clone RP11-295O23, complete sequence Length = 216031 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 atcacacagtacccttttaa 62 |||||||||||||||||||| Sbjct: 90998 atcacacagtacccttttaa 90979
>emb|AL683823.11| Mouse DNA sequence from clone RP23-128G10 on chromosome 3, complete sequence Length = 180483 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 447 ggagatacggttttgctgtg 466 |||||||||||||||||||| Sbjct: 166189 ggagatacggttttgctgtg 166208
>gb|AY036011.1| Manihot esculenta phenylalanine ammonia-lyase 1 (PAL1) mRNA, complete cds Length = 2253 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 275 caccattccactccttcaggcactcaag 302 |||||||||||||||| ||||| ||||| Sbjct: 2190 caccattccactccttgaggcattcaag 2163
>gb|AF326116.1|AF326116 Agastache rugosa phenylalanine ammonia-lyase (PAL) mRNA, complete cds Length = 2448 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 257 agcagataggcaggggctcaccattcca 284 ||||||||||||| || ||||||||||| Sbjct: 2243 agcagataggcagaggttcaccattcca 2216
>gb|DP000027.1| Rattus norvegicus target 1 genomic scaffold Length = 1888123 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 atgaaaacttatcacacagt 52 |||||||||||||||||||| Sbjct: 454584 atgaaaacttatcacacagt 454603
>emb|BX005280.14| Zebrafish DNA sequence from clone CH211-256J23 in linkage group 18, complete sequence Length = 164570 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 agtacccttttaacttacat 69 |||||||||||||||||||| Sbjct: 69378 agtacccttttaacttacat 69397
>emb|AJ810175.1| Beta vulgaris pal gene for phenylalanine ammonia lyase, exons 1-2 Length = 13672 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 259 cagataggcaggggctcaccattccactcctt 290 ||||||||||| || |||||||||||||||| Sbjct: 11838 cagataggcagaggagcaccattccactcctt 11807
>gb|U43338.1|CLU43338 Citrus limon phenylalanine ammonia-lyase (pal6) mRNA, complete cds Length = 2607 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 275 caccattccactccttcaggcactcaag 302 |||||||||||||||||| ||| ||||| Sbjct: 2310 caccattccactccttcaagcattcaag 2283
>emb|AL732559.9| Mouse DNA sequence from clone RP23-9A5 on chromosome 2, complete sequence Length = 167364 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 tatcatgaaaacttatcaca 48 |||||||||||||||||||| Sbjct: 22860 tatcatgaaaacttatcaca 22879 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,912,609 Number of Sequences: 3902068 Number of extensions: 3912609 Number of successful extensions: 69129 Number of sequences better than 10.0: 78 Number of HSP's better than 10.0 without gapping: 81 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 68776 Number of HSP's gapped (non-prelim): 333 length of query: 474 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 452 effective length of database: 17,147,199,772 effective search space: 7750534296944 effective search space used: 7750534296944 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
