>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 68/77 (88%), Gaps = 3/77 (3%)
 Strand = Plus / Minus

                                                                            
Query: 188      taaataccatcttatgatacatgaaacagcagattcacacttacaccagc-aaaaagaaa 246
                |||| |||||||| |||||||| || ||||||||||||| || ||||||| |||||||||
Sbjct: 25480002 taaacaccatcttgtgatacattaagcagcagattcacaattgcaccagcaaaaaagaaa 25479943

                                 
Query: 247      tcaaagggttacttact 263
                ||||  |||||||||||
Sbjct: 25479942 tcaa--ggttacttact 25479928



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 390     ccttttcttgattctcaact 409
               ||||||||||||||||||||
Sbjct: 4216828 ccttttcttgattctcaact 4216809

>dbj|AP004765.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0711H09
          Length = 185858

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 68/77 (88%), Gaps = 3/77 (3%)
 Strand = Plus / Minus

                                                                          
Query: 188    taaataccatcttatgatacatgaaacagcagattcacacttacaccagc-aaaaagaaa 246
              |||| |||||||| |||||||| || ||||||||||||| || ||||||| |||||||||
Sbjct: 111318 taaacaccatcttgtgatacattaagcagcagattcacaattgcaccagcaaaaaagaaa 111259

                               
Query: 247    tcaaagggttacttact 263
              ||||  |||||||||||
Sbjct: 111258 tcaa--ggttacttact 111244

>gb|AC011912.7|AC011912 Homo sapiens chromosome 15 clone RP11-547D13 map 15q21.3, complete
             sequence
          Length = 175264

 Score = 46.1 bits (23), Expect = 0.099
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 195   catcttatgatacatgaaacagc 217
             |||||||||||||||||||||||
Sbjct: 77308 catcttatgatacatgaaacagc 77330

>gb|AC069141.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-23G24, complete
              sequence
          Length = 197264

 Score = 46.1 bits (23), Expect = 0.099
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 177    accaagataaataaataccatct 199
              |||||||||||||||||||||||
Sbjct: 121061 accaagataaataaataccatct 121039

>gb|AC108700.4| Homo sapiens 3 BAC RP11-14B7 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 155455

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 189   aaataccatcttatgatacat 209
             |||||||||||||||||||||
Sbjct: 45159 aaataccatcttatgatacat 45139

>gb|AC009082.7| Homo sapiens chromosome 16 clone RP11-354N7, complete sequence
          Length = 160277

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 165   taacaacaaaagaccaagata 185
             |||||||||||||||||||||
Sbjct: 40524 taacaacaaaagaccaagata 40504

>gb|DQ090940.1| Homo sapiens cadherin 1, type 1, E-cadherin (epithelial) (CDH1) gene,
             complete cds
          Length = 100541

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 165   taacaacaaaagaccaagata 185
             |||||||||||||||||||||
Sbjct: 32020 taacaacaaaagaccaagata 32000

>gb|AC099314.3| Homo sapiens chromosome 16 clone RP11-354M1, complete sequence
          Length = 184945

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 165    taacaacaaaagaccaagata 185
              |||||||||||||||||||||
Sbjct: 111169 taacaacaaaagaccaagata 111149

>gb|AC144940.5| Mus musculus BAC clone RP23-429A10 from chromosome 9, complete sequence
          Length = 213669

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 166    aacaacaaaagaccaagataa 186
              |||||||||||||||||||||
Sbjct: 105911 aacaacaaaagaccaagataa 105931

>emb|BX649220.6| Chicken DNA sequence from clone WAG-14F8, complete sequence
          Length = 87646

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 233   ccagcaaaaagaaatcaaagggtta 257
             |||||||||||||| ||||||||||
Sbjct: 37173 ccagcaaaaagaaagcaaagggtta 37197

>gb|AC137995.31| Medicago truncatula clone mth2-11j1, complete sequence
          Length = 146749

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 187   ataaataccatcttatgata 206
             ||||||||||||||||||||
Sbjct: 57246 ataaataccatcttatgata 57227

>gb|AC008512.8| Homo sapiens chromosome 5 clone CTC-454K8, complete sequence
          Length = 110931

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 172   aaaagaccaagataaataaa 191
             ||||||||||||||||||||
Sbjct: 98835 aaaagaccaagataaataaa 98854

>gb|AC026409.4| Homo sapiens chromosome 5 clone CTC-437M9, complete sequence
          Length = 163384

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 172   aaaagaccaagataaataaa 191
             ||||||||||||||||||||
Sbjct: 80467 aaaagaccaagataaataaa 80448

>gb|AC154792.2| Mus musculus BAC clone RP23-85E10 from chromosome 13, complete sequence
          Length = 201302

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 287    cctctgtcttattgctcctgacat 310
              ||||| ||||||||||||||||||
Sbjct: 181790 cctctctcttattgctcctgacat 181813

>gb|AC021080.4|AC021080 Homo sapiens chromosome 5 clone CTC-203K17, complete sequence
          Length = 103522

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 172   aaaagaccaagataaataaa 191
             ||||||||||||||||||||
Sbjct: 83142 aaaagaccaagataaataaa 83161

>emb|BX548047.12| Zebrafish DNA sequence from clone CH211-77G15 in linkage group 2,
             complete sequence
          Length = 179092

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 166   aacaacaaaagaccaagataaataaata 193
             |||||||||| || ||||||||||||||
Sbjct: 29378 aacaacaaaacacaaagataaataaata 29405

>gb|AC008901.5|AC008901 Homo sapiens chromosome 5 clone CTD-2245E22, complete sequence
          Length = 165916

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 165   taacaacaaaagaccaagat 184
             ||||||||||||||||||||
Sbjct: 73259 taacaacaaaagaccaagat 73278

>gb|AC015555.13|AC015555 Homo sapiens chromosome 21 clone RP11-113F1, complete sequence
          Length = 181511

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 360   tctgcccaagtttttctttt 379
             ||||||||||||||||||||
Sbjct: 36469 tctgcccaagtttttctttt 36450

>gb|AC008580.7| Homo sapiens chromosome 5 clone CTC-564J15, complete sequence
          Length = 122322

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 172  aaaagaccaagataaataaa 191
            ||||||||||||||||||||
Sbjct: 3934 aaaagaccaagataaataaa 3915

>dbj|AP005606.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1590_E05
          Length = 148205

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 390    ccttttcttgattctcaact 409
              ||||||||||||||||||||
Sbjct: 116451 ccttttcttgattctcaact 116432

>gb|AC064865.6| Homo sapiens BAC clone RP11-436E1 from 2, complete sequence
          Length = 197164

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 206   acatgaaacagcagattcacactt 229
             |||||||||||||| |||||||||
Sbjct: 12079 acatgaaacagcagtttcacactt 12056

>emb|AJ326215.1|HSA326215 Homo sapiens genomic sequence surrounding NotI site, clone
           NL1-EM13C
          Length = 610

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 388 ccccttttcttgattctcaa 407
           ||||||||||||||||||||
Sbjct: 296 ccccttttcttgattctcaa 315

>dbj|AP001746.1| Homo sapiens genomic DNA, chromosome 21q, section 90/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 360    tctgcccaagtttttctttt 379
              ||||||||||||||||||||
Sbjct: 193597 tctgcccaagtttttctttt 193616

>gb|AC064793.3| Mus musculus strain C57BL6/J chromosome 5 clone RP23-369O21, complete
              sequence
          Length = 196933

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 365    ccaagtttttcttttggcag 384
              ||||||||||||||||||||
Sbjct: 107249 ccaagtttttcttttggcag 107268

>emb|CT033775.6| Mouse DNA sequence from clone RP24-145H15 on chromosome 13, complete
             sequence
          Length = 168176

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 287   cctctgtcttattgctcctgacat 310
             ||||| ||||||||||||||||||
Sbjct: 91984 cctctctcttattgctcctgacat 91961

>emb|AL513468.9| Mouse DNA sequence from clone RP23-104I6 on chromosome X, complete
             sequence
          Length = 211194

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 360   tctgcccaagtttttctttt 379
             ||||||||||||||||||||
Sbjct: 89339 tctgcccaagtttttctttt 89320

>dbj|AP001623.1| Homo sapiens genomic DNA, chromosome 21, clone:KB169B4, MX1-D21S171
             region, complete sequence
          Length = 157739

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 360   tctgcccaagtttttctttt 379
             ||||||||||||||||||||
Sbjct: 90113 tctgcccaagtttttctttt 90132

>dbj|AB038162.1| Homo sapiens TFF gene cluster for trefoil factor, complete cds
          Length = 57000

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 360  tctgcccaagtttttctttt 379
            ||||||||||||||||||||
Sbjct: 7752 tctgcccaagtttttctttt 7733


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,076,778
Number of Sequences: 3902068
Number of extensions: 6076778
Number of successful extensions: 106517
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 106373
Number of HSP's gapped (non-prelim): 144
length of query: 454
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 432
effective length of database: 17,147,199,772
effective search space: 7407590301504
effective search space used: 7407590301504
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)