Clone Name | rbastl26h12 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | PSBS_SOLSG (Q9FPP4) Photosystem II 22 kDa protein, chloroplast p... | 29 | 4.0 | 2 | PSBS_LYCES (P54773) Photosystem II 22 kDa protein, chloroplast p... | 29 | 4.0 |
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>PSBS_SOLSG (Q9FPP4) Photosystem II 22 kDa protein, chloroplast precursor| (CP22) Length = 276 Score = 28.9 bits (63), Expect = 4.0 Identities = 14/28 (50%), Positives = 19/28 (67%) Frame = +3 Query: 51 PLQAIQVPSSLLRFSTSKTELDSNKATS 134 PL ++ +PS LRFS+S T S+K TS Sbjct: 29 PLSSLFLPSLPLRFSSSTTNFSSSKFTS 56
>PSBS_LYCES (P54773) Photosystem II 22 kDa protein, chloroplast precursor| (CP22) Length = 276 Score = 28.9 bits (63), Expect = 4.0 Identities = 14/28 (50%), Positives = 19/28 (67%) Frame = +3 Query: 51 PLQAIQVPSSLLRFSTSKTELDSNKATS 134 PL ++ +PS LRFS+S T S+K TS Sbjct: 29 PLSSLFLPSLPLRFSSSSTNASSSKFTS 56 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 19,986,338 Number of Sequences: 219361 Number of extensions: 241685 Number of successful extensions: 587 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 585 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 587 length of database: 80,573,946 effective HSP length: 27 effective length of database: 74,651,199 effective search space used: 1791628776 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)