Clone Name | rbastl26h12 |
---|---|
Clone Library Name | barley_pub |
>emb|AL132641.3|CNS01DT6 Human chromosome 14 DNA sequence BAC C-3175A2 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 136603 Score = 44.1 bits (22), Expect = 0.12 Identities = 22/22 (100%) Strand = Plus / Plus Query: 6 aattcatgtaatatacagtcta 27 |||||||||||||||||||||| Sbjct: 49539 aattcatgtaatatacagtcta 49560
>gb|AC161241.18| Medicago truncatula clone mth2-193c3, complete sequence Length = 125129 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 tcctcacttttgaggttttc 94 |||||||||||||||||||| Sbjct: 90566 tcctcacttttgaggttttc 90547
>gb|AC135409.3| Rattus norvegicus 8 BAC CH230-416D7 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 231716 Score = 38.2 bits (19), Expect = 7.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 67 aagttccatcctcacttttgagg 89 ||||||||||| ||||||||||| Sbjct: 8771 aagttccatccacacttttgagg 8793
>ref|NM_153223.2| Homo sapiens coiled-coil domain containing 100 (CCDC100), mRNA Length = 4677 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 75 tcctcacttttgaggtttt 93 ||||||||||||||||||| Sbjct: 3117 tcctcacttttgaggtttt 3099
>gb|AC126431.3| Mus musculus BAC clone RP24-407P8 from chromosome 6, complete sequence Length = 144924 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 77 ctcacttttgaggttttca 95 ||||||||||||||||||| Sbjct: 119072 ctcacttttgaggttttca 119054
>gb|AY197700.1| Trichoplusia ni ascovirus 2a putative major capsid protein gene, complete cds Length = 3808 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 32 tcgacaaaggtatagctag 50 ||||||||||||||||||| Sbjct: 2625 tcgacaaaggtatagctag 2607
>emb|BX648687.1|HSM808838 Homo sapiens mRNA; cDNA DKFZp686H2338 (from clone DKFZp686H2338) Length = 3040 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 75 tcctcacttttgaggtttt 93 ||||||||||||||||||| Sbjct: 1544 tcctcacttttgaggtttt 1526
>emb|AL590392.5| Human DNA sequence from clone RP11-453D21 on chromosome 6, complete sequence Length = 104011 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 74 atcctcacttttgaggttt 92 ||||||||||||||||||| Sbjct: 72578 atcctcacttttgaggttt 72560
>dbj|AK093409.1| Homo sapiens cDNA FLJ36090 fis, clone TESTI2020510 Length = 2341 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 75 tcctcacttttgaggtttt 93 ||||||||||||||||||| Sbjct: 1837 tcctcacttttgaggtttt 1819
>gb|AC087847.6| Homo sapiens chromosome 8, clone RP11-353D5, complete sequence Length = 170722 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 81 cttttgaggttttcaacca 99 ||||||||||||||||||| Sbjct: 45610 cttttgaggttttcaacca 45592
>gb|AC084250.6| Homo sapiens chromosome 8, clone RP11-89F14, complete sequence Length = 151889 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 81 cttttgaggttttcaacca 99 ||||||||||||||||||| Sbjct: 66272 cttttgaggttttcaacca 66290
>gb|AC010369.7| Homo sapiens chromosome 5 clone CTD-2048F20, complete sequence Length = 160459 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 75 tcctcacttttgaggtttt 93 ||||||||||||||||||| Sbjct: 93162 tcctcacttttgaggtttt 93180
>emb|AL844591.6| Mouse DNA sequence from clone RP23-414J11 on chromosome 2, complete sequence Length = 215003 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 4 agaattcatgtaatataca 22 ||||||||||||||||||| Sbjct: 177766 agaattcatgtaatataca 177784
>gb|AC011897.10| Homo sapiens BAC clone RP11-314E10 from 2, complete sequence Length = 200223 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 75 tcctcacttttgaggtttt 93 ||||||||||||||||||| Sbjct: 91472 tcctcacttttgaggtttt 91454
>gb|AC011545.4|AC011545 Homo sapiens chromosome 19, cosmid R30477 (LLNL-R_266D1), complete sequence Length = 38611 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 64 ttcaagttccatcctcact 82 ||||||||||||||||||| Sbjct: 15764 ttcaagttccatcctcact 15782
>gb|AF235093.1|AF235093 Homo sapiens chromosome 21 map 21q21 clone PAC P704-39J11, complete sequence Length = 161121 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 6 aattcatgtaatatacagt 24 ||||||||||||||||||| Sbjct: 76649 aattcatgtaatatacagt 76667
>dbj|BS000022.1| Pan troglodytes chromosome 22 clone:PTB-131J13, map 22, complete sequences Length = 214189 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 6 aattcatgtaatatacagt 24 ||||||||||||||||||| Sbjct: 104954 aattcatgtaatatacagt 104972
>emb|AL163210.2|HS21C010 Homo sapiens chromosome 21 segment HS21C010 Length = 340000 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 6 aattcatgtaatatacagt 24 ||||||||||||||||||| Sbjct: 280406 aattcatgtaatatacagt 280424
>gb|AC154174.2| Ornithorhynchus anatinus chromosome UNK clone OABb-224A1, complete sequence Length = 125740 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 72 ccatcctcacttttgaggt 90 ||||||||||||||||||| Sbjct: 104205 ccatcctcacttttgaggt 104187
>gb|AC173482.1| Mus musculus BAC clone RP23-383F20 from chromosome 14, complete sequence Length = 216037 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 84 ttgaggttttcaaccagca 102 ||||||||||||||||||| Sbjct: 108591 ttgaggttttcaaccagca 108609
>emb|AL109762.3|HSM24152 Homo sapiens chromosome 21 sequence from PAC RPCI-1 152M24 map 21q21 region D21S189-LA297, complete sequence Length = 116137 Score = 38.2 bits (19), Expect = 7.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 6 aattcatgtaatatacagt 24 ||||||||||||||||||| Sbjct: 38241 aattcatgtaatatacagt 38259 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,103,112 Number of Sequences: 3902068 Number of extensions: 1103112 Number of successful extensions: 74022 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 22 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 73990 Number of HSP's gapped (non-prelim): 32 length of query: 156 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 134 effective length of database: 17,147,199,772 effective search space: 2297724769448 effective search space used: 2297724769448 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)