ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl26h11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AC160471.10| Mus musculus chromosome 7, clone RP23-432D9, com... 44 0.34
2gb|AC163021.5| Mus musculus chromosome 15, clone RP23-228E13, co... 44 0.34
3gb|AC113250.3| Drosophila melanogaster 3L BAC RP98-6P13 (Roswell... 44 0.34
4gb|AC010695.5| Drosophila melanogaster 3L BAC RP98-20J4 (Roswell... 44 0.34
5gb|AC119193.9| Mus musculus chromosome 7, clone RP24-178L6, comp... 44 0.34
6emb|BX649386.4| Zebrafish DNA sequence from clone RP71-18A24 in ... 44 0.34
7gb|AE003530.3| Drosophila melanogaster chromosome 3L, section 55... 44 0.34
8gb|AC110196.9| Mus musculus chromosome 15, clone RP24-343E7, com... 44 0.34
9gb|AC167357.6| Mus musculus chromosome 7, clone RP23-388K14, com... 44 0.34
10gb|AC137065.26| Medicago truncatula clone mth2-29h7, complete se... 42 1.3
11emb|AL365189.15| Human DNA sequence from clone RP11-595C20 on ch... 42 1.3
12gb|AF395165.1| Periclistus brandti internal transcribed spacer 1... 42 1.3
13gb|DQ332659.1| Synthetic construct Saccharomyces cerevisiae clon... 42 1.3
14gb|M59311.1|YSCEPT1 S.cerevisiae sn-1,2-diacylglycerol ethanolam... 42 1.3
15gb|U10398.3|YSCH9315 Saccharomyces cerevisiae chromosome VIII co... 42 1.3
16gb|AC153383.1| Mus musculus 6 BAC RP23-168L2 (Roswell Park Cance... 40 5.3
17gb|AC153727.6| Mus musculus BAC clone RP23-354L15 from chromosom... 40 5.3
18gb|AC121560.17| Mus musculus chromosome 16, clone RP24-398G11, c... 40 5.3
19gb|AC115844.7| Mus musculus chromosome 15, clone RP24-240I3, com... 40 5.3
20gb|AC115749.12| Mus musculus chromosome 3, clone RP23-14C17, com... 40 5.3
21gb|AC113323.12| Mus musculus chromosome 15, clone RP23-451O9, co... 40 5.3
22gb|AC115793.14| Mus musculus chromosome 9, clone RP23-400G18, co... 40 5.3
23gb|AC099695.15| Mus musculus chromosome 10, clone RP23-234P12, c... 40 5.3
24gb|AC167724.6| Mus musculus 10 BAC RP23-331P17 (Roswell Park Can... 40 5.3
25gb|AC140303.3| Mus musculus BAC clone RP23-381H21 from chromosom... 40 5.3
26gb|AC131081.7| Mus musculus chromosome 10, clone RP23-438J1, com... 40 5.3
27gb|AC024957.9| Mus musculus chromosome 16, clone RP23-178A24, co... 40 5.3
28gb|AC158616.8| Mus musculus 10 BAC RP23-227E23 (Roswell Park Can... 40 5.3
29gb|AC159002.2| Mus musculus BAC clone RP23-203D7 from chromosome... 40 5.3
30gb|AC138108.3| Mus musculus BAC clone RP24-497M9 from chromosome... 40 5.3
31gb|AC121973.2| Mus musculus BAC clone RP24-276I10 from chromosom... 40 5.3
32emb|BX936420.9| Zebrafish DNA sequence from clone DKEY-7F16 in l... 40 5.3
33gb|AC005017.1| Homo sapiens BAC clone GS1-214N13 from 7, complet... 40 5.3
34emb|BX663608.26| Zebrafish DNA sequence from clone DKEY-223I19 i... 40 5.3
35gb|AC158307.5| Mus musculus chromosome 3, clone RP23-148J20, com... 40 5.3
36gb|AC158963.3| Mus musculus chromosome 1, clone RP23-321A12, com... 40 5.3
37gb|AC158795.4| Mus musculus chromosome 3, clone RP23-261G9, comp... 40 5.3
38emb|AL022312.7|HS1104E15 Human DNA sequence from clone RP5-1104E... 40 5.3
39emb|Z98977.4|SPAC23H4 S.pombe chromosome I cosmid c23H4 40 5.3
40gb|AC166247.3| Mus musculus BAC RP23-426E9 (Roswell Park Cancer... 40 5.3
41emb|AL513411.1|NCG65A3 Neurospora crassa DNA linkage group V Cos... 40 5.3
42gb|AC102128.18| Mus musculus chromosome 3, clone RP23-205G9, com... 40 5.3
43gb|AC010108.6| Drosophila melanogaster 3L BAC RP98-23K9 (Roswell... 40 5.3
44gb|AC091226.3| Drosophila melanogaster 3L BAC RP98-3I13 (Roswell... 40 5.3
45ref|NM_168454.1| Drosophila melanogaster CG32083-RA (CG32083), mRNA 40 5.3
46gb|AY526079.1| Mus musculus neural retina leucine zipper (Nrl) g... 40 5.3
47gb|AC099011.1| Drosophila melanogaster, chromosome 2L, region 24... 40 5.3
48emb|CR478112.2| Mouse DNA sequence from clone WI1-2389C6 on chro... 40 5.3
49gb|AC153932.10| Mus musculus 10 BAC RP24-266J23 (Roswell Park Ca... 40 5.3
50gb|AC158985.2| Mus musculus BAC clone RP23-277H13 from chromosom... 40 5.3
51gb|AC134432.4| Mus musculus BAC clone RP24-389K11 from chromosom... 40 5.3
52dbj|AK004352.1| Mus musculus 18-day embryo whole body cDNA, RIKE... 40 5.3
53dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
54gb|AC008003.8|AC008003 Drosophila melanogaster, chromosome 2L, r... 40 5.3
55gb|AC158653.7| Mus musculus 6 BAC RP23-418F10 (Roswell Park Canc... 40 5.3
56gb|AC154554.2| Mus musculus BAC clone RP23-416P6 from chromosome... 40 5.3
57gb|AC122686.6| Homo sapiens 12 BAC RP11-295J2 (Roswell Park Canc... 40 5.3
58gb|AC128709.6| Homo sapiens 3 BAC RP13-616I3 (Roswell Park Cance... 40 5.3
59gb|AC135999.4| Homo sapiens chromosome 15, clone RP13-911E13, co... 40 5.3
60emb|BX247882.6| Zebrafish DNA sequence from clone CH211-224P3 in... 40 5.3
61emb|AL929128.4| Zebrafish DNA sequence from clone CH211-203P17 i... 40 5.3
62dbj|AP003925.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
63gb|AC114425.14| Mus musculus chromosome 5, clone RP24-85B11, com... 40 5.3
64gb|AE014299.1| Shewanella oneidensis MR-1, complete genome 40 5.3
65emb|CT025698.13| Mouse DNA sequence from clone RP24-223P14 on ch... 40 5.3
66gb|AC005633.2|AC005633 Drosophila melanogaster, chromosome 2L, r... 40 5.3
67emb|CR942772.2| Xenopus tropicalis finished cDNA, clone TEgg036g05 40 5.3
68gb|AE003577.4| Drosophila melanogaster chromosome 2L, section 14... 40 5.3
69gb|AE003545.3| Drosophila melanogaster chromosome 3L, section 40... 40 5.3
70gb|AE003537.3| Drosophila melanogaster chromosome 3L, section 48... 40 5.3
71gb|AC131084.13| Mus musculus chromosome 1, clone RP23-450D2, com... 40 5.3
72gb|AC102506.9| Mus musculus chromosome 1, clone RP24-139E15, com... 40 5.3
73gb|AC174678.2| Mus musculus BAC clone RP23-11O22 from chromosome... 40 5.3
74emb|AL954677.8| Zebrafish DNA sequence from clone DKEY-13J14 in ... 40 5.3
75gb|AC117767.13| Mus musculus chromosome 1, clone RP24-507O16, co... 40 5.3
76gb|AC140111.3| Mus musculus BAC clone RP23-16F4 from 12, complet... 40 5.3
77gb|AC126269.3| Mus musculus BAC clone RP23-230D6 from 12, comple... 40 5.3
78emb|AL807784.11| Mouse DNA sequence from clone RP23-448C18 on ch... 40 5.3
79emb|AL596456.15| Mouse DNA sequence from clone RP23-353K20 on ch... 40 5.3
80emb|AL606908.10| Mouse DNA sequence from clone RP23-273D6 on chr... 40 5.3
81emb|AL671917.8| Mouse DNA sequence from clone RP23-217I18 on chr... 40 5.3
82emb|AL731705.11| Mouse DNA sequence from clone RP23-72M11 on chr... 40 5.3

>gb|AC160471.10| Mus musculus chromosome 7, clone RP23-432D9, complete sequence
          Length = 222272

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 61     acgaaacgaaacgaaacaaaca 82
              ||||||||||||||||||||||
Sbjct: 152714 acgaaacgaaacgaaacaaaca 152735



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>gb|AC163021.5| Mus musculus chromosome 15, clone RP23-228E13, complete sequence
          Length = 215165

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 61     acgaaacgaaacgaaacaaaca 82
              ||||||||||||||||||||||
Sbjct: 189712 acgaaacgaaacgaaacaaaca 189733



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>gb|AC113250.3| Drosophila melanogaster 3L BAC RP98-6P13 (Roswell Park Cancer
            Institute Drosophila BAC Library) complete sequence
          Length = 168299

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 62   cgaaacgaaacgaaacaaacag 83
            ||||||||||||||||||||||
Sbjct: 4529 cgaaacgaaacgaaacaaacag 4550



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>gb|AC010695.5| Drosophila melanogaster 3L BAC RP98-20J4 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 160650

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 62     cgaaacgaaacgaaacaaacag 83
              ||||||||||||||||||||||
Sbjct: 118492 cgaaacgaaacgaaacaaacag 118513



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>gb|AC119193.9| Mus musculus chromosome 7, clone RP24-178L6, complete sequence
          Length = 162310

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 61     acgaaacgaaacgaaacaaaca 82
              ||||||||||||||||||||||
Sbjct: 119798 acgaaacgaaacgaaacaaaca 119777



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>emb|BX649386.4| Zebrafish DNA sequence from clone RP71-18A24 in linkage group 4,
             complete sequence
          Length = 161671

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 61    acgaaacgaaacgaaacaaaca 82
             ||||||||||||||||||||||
Sbjct: 81984 acgaaacgaaacgaaacaaaca 82005



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>gb|AE003530.3| Drosophila melanogaster chromosome 3L, section 55 of 83 of the complete
              sequence
          Length = 279152

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 62     cgaaacgaaacgaaacaaacag 83
              ||||||||||||||||||||||
Sbjct: 277459 cgaaacgaaacgaaacaaacag 277480



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>gb|AC110196.9| Mus musculus chromosome 15, clone RP24-343E7, complete sequence
          Length = 154367

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 61     acgaaacgaaacgaaacaaaca 82
              ||||||||||||||||||||||
Sbjct: 142979 acgaaacgaaacgaaacaaaca 142958



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>gb|AC167357.6| Mus musculus chromosome 7, clone RP23-388K14, complete sequence
          Length = 185128

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 61    acgaaacgaaacgaaacaaaca 82
             ||||||||||||||||||||||
Sbjct: 14672 acgaaacgaaacgaaacaaaca 14651



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>gb|AC137065.26| Medicago truncatula clone mth2-29h7, complete sequence
          Length = 105004

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 243    aaatattagtcaacaatggtacaaa 267
              |||||||||||||||||| ||||||
Sbjct: 101295 aaatattagtcaacaatgttacaaa 101319



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>emb|AL365189.15| Human DNA sequence from clone RP11-595C20 on chromosome 6, complete
             sequence
          Length = 97534

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 165   tcaaaattatagtacaatact 185
             |||||||||||||||||||||
Sbjct: 39882 tcaaaattatagtacaatact 39902



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>gb|AF395165.1| Periclistus brandti internal transcribed spacer 1, partial
           sequence; 5.8S ribosomal RNA gene, complete sequence;
           and internal transcribed spacer 2, partial sequence
          Length = 1638

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 60  cacgaaacgaaacgaaacaaa 80
           |||||||||||||||||||||
Sbjct: 212 cacgaaacgaaacgaaacaaa 232



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>gb|DQ332659.1| Synthetic construct Saccharomyces cerevisiae clone FLH201517.01X
           EPT1 gene, complete sequence
          Length = 1267

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 85  cgctggtatcgaagtatttct 105
           |||||||||||||||||||||
Sbjct: 162 cgctggtatcgaagtatttct 182



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>gb|M59311.1|YSCEPT1 S.cerevisiae sn-1,2-diacylglycerol ethanolamine phosphotransferase
           (EPT1) gene, complete cds
          Length = 2123

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 85  cgctggtatcgaagtatttct 105
           |||||||||||||||||||||
Sbjct: 721 cgctggtatcgaagtatttct 741



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>gb|U10398.3|YSCH9315 Saccharomyces cerevisiae chromosome VIII cosmid 9315
          Length = 30351

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 85   cgctggtatcgaagtatttct 105
            |||||||||||||||||||||
Sbjct: 1774 cgctggtatcgaagtatttct 1794



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>gb|AC153383.1| Mus musculus 6 BAC RP23-168L2 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 197962

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 61    acgaaacgaaacgaaacaaa 80
             ||||||||||||||||||||
Sbjct: 83263 acgaaacgaaacgaaacaaa 83244



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>gb|AC153727.6| Mus musculus BAC clone RP23-354L15 from chromosome 12, complete
             sequence
          Length = 202733

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 61    acgaaacgaaacgaaacaaa 80
             ||||||||||||||||||||
Sbjct: 77686 acgaaacgaaacgaaacaaa 77705



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>gb|AC121560.17| Mus musculus chromosome 16, clone RP24-398G11, complete sequence
          Length = 189161

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 61    acgaaacgaaacgaaacaaa 80
             ||||||||||||||||||||
Sbjct: 26251 acgaaacgaaacgaaacaaa 26232



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>gb|AC115844.7| Mus musculus chromosome 15, clone RP24-240I3, complete sequence
          Length = 164109

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 61    acgaaacgaaacgaaacaaa 80
             ||||||||||||||||||||
Sbjct: 56706 acgaaacgaaacgaaacaaa 56687



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>gb|AC115749.12| Mus musculus chromosome 3, clone RP23-14C17, complete sequence
          Length = 230988

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 61    acgaaacgaaacgaaacaaa 80
             ||||||||||||||||||||
Sbjct: 74318 acgaaacgaaacgaaacaaa 74337



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>gb|AC113323.12| Mus musculus chromosome 15, clone RP23-451O9, complete sequence
          Length = 175138

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 61     acgaaacgaaacgaaacaaa 80
              ||||||||||||||||||||
Sbjct: 138451 acgaaacgaaacgaaacaaa 138432



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>gb|AC115793.14| Mus musculus chromosome 9, clone RP23-400G18, complete sequence
          Length = 199109

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 37     acatatttatgttctctgat 56
              ||||||||||||||||||||
Sbjct: 181486 acatatttatgttctctgat 181505



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>gb|AC099695.15| Mus musculus chromosome 10, clone RP23-234P12, complete sequence
          Length = 169161

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 61     acgaaacgaaacgaaacaaa 80
              ||||||||||||||||||||
Sbjct: 119751 acgaaacgaaacgaaacaaa 119770



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>gb|AC167724.6| Mus musculus 10 BAC RP23-331P17 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 230186

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 61    acgaaacgaaacgaaacaaa 80
             ||||||||||||||||||||
Sbjct: 66337 acgaaacgaaacgaaacaaa 66356



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>gb|AC140303.3| Mus musculus BAC clone RP23-381H21 from chromosome 3, complete sequence
          Length = 192020

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 61    acgaaacgaaacgaaacaaa 80
             ||||||||||||||||||||
Sbjct: 23395 acgaaacgaaacgaaacaaa 23414



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>gb|AC131081.7| Mus musculus chromosome 10, clone RP23-438J1, complete sequence
          Length = 214060

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 61    acgaaacgaaacgaaacaaa 80
             ||||||||||||||||||||
Sbjct: 63593 acgaaacgaaacgaaacaaa 63574



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>gb|AC024957.9| Mus musculus chromosome 16, clone RP23-178A24, complete sequence
          Length = 229563

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 61    acgaaacgaaacgaaacaaa 80
             ||||||||||||||||||||
Sbjct: 15016 acgaaacgaaacgaaacaaa 15035



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>gb|AC158616.8| Mus musculus 10 BAC RP23-227E23 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 248127

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 61     acgaaacgaaacgaaacaaa 80
              ||||||||||||||||||||
Sbjct: 183161 acgaaacgaaacgaaacaaa 183142



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>gb|AC159002.2| Mus musculus BAC clone RP23-203D7 from chromosome 14, complete sequence
          Length = 181842

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 61    acgaaacgaaacgaaacaaa 80
             ||||||||||||||||||||
Sbjct: 31522 acgaaacgaaacgaaacaaa 31541



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>gb|AC138108.3| Mus musculus BAC clone RP24-497M9 from chromosome 10, complete sequence
          Length = 135541

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 61    acgaaacgaaacgaaacaaa 80
             ||||||||||||||||||||
Sbjct: 56131 acgaaacgaaacgaaacaaa 56150



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>gb|AC121973.2| Mus musculus BAC clone RP24-276I10 from chromosome 19, complete sequence
          Length = 170313

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 61     acgaaacgaaacgaaacaaa 80
              ||||||||||||||||||||
Sbjct: 102356 acgaaacgaaacgaaacaaa 102375



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>emb|BX936420.9| Zebrafish DNA sequence from clone DKEY-7F16 in linkage group 3,
             complete sequence
          Length = 168285

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 61    acgaaacgaaacgaaacaaa 80
             ||||||||||||||||||||
Sbjct: 84105 acgaaacgaaacgaaacaaa 84124



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>gb|AC005017.1| Homo sapiens BAC clone GS1-214N13 from 7, complete sequence
          Length = 137176

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 98    gtatttctagaactgtcaac 117
             ||||||||||||||||||||
Sbjct: 13806 gtatttctagaactgtcaac 13825



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>emb|BX663608.26| Zebrafish DNA sequence from clone DKEY-223I19 in linkage group 7,
             complete sequence
          Length = 190528

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 61    acgaaacgaaacgaaacaaa 80
             ||||||||||||||||||||
Sbjct: 16151 acgaaacgaaacgaaacaaa 16132



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>gb|AC158307.5| Mus musculus chromosome 3, clone RP23-148J20, complete sequence
          Length = 204891

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 61    acgaaacgaaacgaaacaaa 80
             ||||||||||||||||||||
Sbjct: 12026 acgaaacgaaacgaaacaaa 12045



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>gb|AC158963.3| Mus musculus chromosome 1, clone RP23-321A12, complete sequence
          Length = 203604

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 61    acgaaacgaaacgaaacaaa 80
             ||||||||||||||||||||
Sbjct: 32141 acgaaacgaaacgaaacaaa 32160



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>gb|AC158795.4| Mus musculus chromosome 3, clone RP23-261G9, complete sequence
          Length = 155916

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 61    acgaaacgaaacgaaacaaa 80
             ||||||||||||||||||||
Sbjct: 40713 acgaaacgaaacgaaacaaa 40732



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>emb|AL022312.7|HS1104E15 Human DNA sequence from clone RP5-1104E15 on chromosome 22q12.3-13.1
            Contains the MGAT3 gene for mannosyl
            (beta-1,4-)-glycoprotein
            beta-1,4-N-acetylglucosaminyltransferase, the gene for a
            predicted protein, the ATF4 gene for activating
            transcription factor 4 (tax-responsive enhancer element
            B67) and the 5' end of the CACNA1I gene for
            voltage-dependent calcium channel, alpha 1I subunit.
            Contains ESTs, STSs, GSSs and five putative CpG islands,
            complete sequence
          Length = 112460

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 61   acgaaacgaaacgaaacaaa 80
            ||||||||||||||||||||
Sbjct: 8432 acgaaacgaaacgaaacaaa 8413



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>emb|Z98977.4|SPAC23H4 S.pombe chromosome I cosmid c23H4
          Length = 40387

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 61    acgaaacgaaacgaaacaaa 80
             ||||||||||||||||||||
Sbjct: 27983 acgaaacgaaacgaaacaaa 28002



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>gb|AC166247.3| Mus musculus  BAC RP23-426E9 (Roswell Park Cancer Institute
           (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 191393

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 61  acgaaacgaaacgaaacaaa 80
           ||||||||||||||||||||
Sbjct: 408 acgaaacgaaacgaaacaaa 389



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>emb|AL513411.1|NCG65A3 Neurospora crassa DNA linkage group V Cosmid contig G65A3
          Length = 62544

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 61   acgaaacgaaacgaaacaaa 80
            ||||||||||||||||||||
Sbjct: 1108 acgaaacgaaacgaaacaaa 1089



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>gb|AC102128.18| Mus musculus chromosome 3, clone RP23-205G9, complete sequence
          Length = 192509

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 61    acgaaacgaaacgaaacaaa 80
             ||||||||||||||||||||
Sbjct: 18931 acgaaacgaaacgaaacaaa 18912



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>gb|AC010108.6| Drosophila melanogaster 3L BAC RP98-23K9 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 167187

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 61    acgaaacgaaacgaaacaaa 80
             ||||||||||||||||||||
Sbjct: 52487 acgaaacgaaacgaaacaaa 52468



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>gb|AC091226.3| Drosophila melanogaster 3L BAC RP98-3I13 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 165518

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 61     acgaaacgaaacgaaacaaa 80
              ||||||||||||||||||||
Sbjct: 113932 acgaaacgaaacgaaacaaa 113951



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>ref|NM_168454.1| Drosophila melanogaster CG32083-RA (CG32083), mRNA
          Length = 662

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 61 acgaaacgaaacgaaacaaa 80
          ||||||||||||||||||||
Sbjct: 73 acgaaacgaaacgaaacaaa 92



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>gb|AY526079.1| Mus musculus neural retina leucine zipper (Nrl) gene, promoter
           region and 5' UTR
          Length = 2420

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 61  acgaaacgaaacgaaacaaa 80
           ||||||||||||||||||||
Sbjct: 120 acgaaacgaaacgaaacaaa 139



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>gb|AC099011.1| Drosophila melanogaster, chromosome 2L, region 24C-24D, BAC clone
              BACR22M14, complete sequence
          Length = 173380

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 58     cccacgaaacgaaacgaaac 77
              ||||||||||||||||||||
Sbjct: 172270 cccacgaaacgaaacgaaac 172289



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>emb|CR478112.2| Mouse DNA sequence from clone WI1-2389C6 on chromosome X, complete
            sequence
          Length = 30869

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 61   acgaaacgaaacgaaacaaa 80
            ||||||||||||||||||||
Sbjct: 4780 acgaaacgaaacgaaacaaa 4799



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>gb|AC153932.10| Mus musculus 10 BAC RP24-266J23 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 162628

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 61    acgaaacgaaacgaaacaaa 80
             ||||||||||||||||||||
Sbjct: 97434 acgaaacgaaacgaaacaaa 97453



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>gb|AC158985.2| Mus musculus BAC clone RP23-277H13 from chromosome 16, complete
             sequence
          Length = 174321

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 61    acgaaacgaaacgaaacaaa 80
             ||||||||||||||||||||
Sbjct: 66163 acgaaacgaaacgaaacaaa 66144



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>gb|AC134432.4| Mus musculus BAC clone RP24-389K11 from chromosome 8, complete sequence
          Length = 150334

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 61    acgaaacgaaacgaaacaaa 80
             ||||||||||||||||||||
Sbjct: 79161 acgaaacgaaacgaaacaaa 79142



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>dbj|AK004352.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length
           enriched library, clone:1110062M06
           product:unclassifiable, full insert sequence
          Length = 470

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 61  acgaaacgaaacgaaacaaa 80
           ||||||||||||||||||||
Sbjct: 354 acgaaacgaaacgaaacaaa 335



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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 61      acgaaacgaaacgaaacaaa 80
               ||||||||||||||||||||
Sbjct: 1068862 acgaaacgaaacgaaacaaa 1068881



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>gb|AC008003.8|AC008003 Drosophila melanogaster, chromosome 2L, region 24D-24D, BAC clone
             BACR48D02, complete sequence
          Length = 181728

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 58    cccacgaaacgaaacgaaac 77
             ||||||||||||||||||||
Sbjct: 86924 cccacgaaacgaaacgaaac 86943



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>gb|AC158653.7| Mus musculus 6 BAC RP23-418F10 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 185818

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 61     acgaaacgaaacgaaacaaa 80
              ||||||||||||||||||||
Sbjct: 108550 acgaaacgaaacgaaacaaa 108531



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>gb|AC154554.2| Mus musculus BAC clone RP23-416P6 from chromosome 13, complete sequence
          Length = 204294

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 239    tacaaaatattagtcaacaa 258
              ||||||||||||||||||||
Sbjct: 131842 tacaaaatattagtcaacaa 131823



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>gb|AC122686.6| Homo sapiens 12 BAC RP11-295J2 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 121995

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 61    acgaaacgaaacgaaacaaa 80
             ||||||||||||||||||||
Sbjct: 46939 acgaaacgaaacgaaacaaa 46920



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>gb|AC128709.6| Homo sapiens 3 BAC RP13-616I3 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 163031

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 61     acgaaacgaaacgaaacaaa 80
              ||||||||||||||||||||
Sbjct: 101803 acgaaacgaaacgaaacaaa 101822



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>gb|AC135999.4| Homo sapiens chromosome 15, clone RP13-911E13, complete sequence
          Length = 101277

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 44    tatgttctctgatgcccacg 63
             ||||||||||||||||||||
Sbjct: 36347 tatgttctctgatgcccacg 36328



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>emb|BX247882.6| Zebrafish DNA sequence from clone CH211-224P3 in linkage group 14,
             complete sequence
          Length = 196155

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 61    acgaaacgaaacgaaacaaa 80
             ||||||||||||||||||||
Sbjct: 41264 acgaaacgaaacgaaacaaa 41245



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>emb|AL929128.4| Zebrafish DNA sequence from clone CH211-203P17 in linkage group 17,
             complete sequence
          Length = 100859

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 61    acgaaacgaaacgaaacaaa 80
             ||||||||||||||||||||
Sbjct: 77545 acgaaacgaaacgaaacaaa 77526



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>dbj|AP003925.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1005_B05
          Length = 144799

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 61    acgaaacgaaacgaaacaaa 80
             ||||||||||||||||||||
Sbjct: 97389 acgaaacgaaacgaaacaaa 97408



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>gb|AC114425.14| Mus musculus chromosome 5, clone RP24-85B11, complete sequence
          Length = 208233

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 61    acgaaacgaaacgaaacaaa 80
             ||||||||||||||||||||
Sbjct: 79186 acgaaacgaaacgaaacaaa 79205



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>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome
          Length = 4969803

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 240     acaaaatattagtcaacaat 259
               ||||||||||||||||||||
Sbjct: 2555987 acaaaatattagtcaacaat 2555968



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>emb|CT025698.13| Mouse DNA sequence from clone RP24-223P14 on chromosome 9, complete
              sequence
          Length = 193973

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 37     acatatttatgttctctgat 56
              ||||||||||||||||||||
Sbjct: 157054 acatatttatgttctctgat 157035



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>gb|AC005633.2|AC005633 Drosophila melanogaster, chromosome 2L, region 24D3-24D5, P1 clone
             DS04766, complete sequence
          Length = 64879

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 58    cccacgaaacgaaacgaaac 77
             ||||||||||||||||||||
Sbjct: 35388 cccacgaaacgaaacgaaac 35407



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>emb|CR942772.2| Xenopus tropicalis finished cDNA, clone TEgg036g05
          Length = 3867

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 30   cagtagtacatatttatgtt 49
            ||||||||||||||||||||
Sbjct: 2510 cagtagtacatatttatgtt 2529



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>gb|AE003577.4| Drosophila melanogaster chromosome 2L, section 14 of 83 of the
            complete sequence
          Length = 290034

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 58   cccacgaaacgaaacgaaac 77
            ||||||||||||||||||||
Sbjct: 7684 cccacgaaacgaaacgaaac 7703



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>gb|AE003545.3| Drosophila melanogaster chromosome 3L, section 40 of 83 of the complete
              sequence
          Length = 282115

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 61     acgaaacgaaacgaaacaaa 80
              ||||||||||||||||||||
Sbjct: 111086 acgaaacgaaacgaaacaaa 111067



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>gb|AE003537.3| Drosophila melanogaster chromosome 3L, section 48 of 83 of the complete
              sequence
          Length = 282116

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 61     acgaaacgaaacgaaacaaa 80
              ||||||||||||||||||||
Sbjct: 177755 acgaaacgaaacgaaacaaa 177774



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>gb|AC131084.13| Mus musculus chromosome 1, clone RP23-450D2, complete sequence
          Length = 208140

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 61    acgaaacgaaacgaaacaaa 80
             ||||||||||||||||||||
Sbjct: 72943 acgaaacgaaacgaaacaaa 72962



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>gb|AC102506.9| Mus musculus chromosome 1, clone RP24-139E15, complete sequence
          Length = 151816

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 61     acgaaacgaaacgaaacaaa 80
              ||||||||||||||||||||
Sbjct: 115825 acgaaacgaaacgaaacaaa 115844



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>gb|AC174678.2| Mus musculus BAC clone RP23-11O22 from chromosome 14, complete sequence
          Length = 224638

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 61     acgaaacgaaacgaaacaaa 80
              ||||||||||||||||||||
Sbjct: 134649 acgaaacgaaacgaaacaaa 134668



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>emb|AL954677.8| Zebrafish DNA sequence from clone DKEY-13J14 in linkage group 8,
             complete sequence
          Length = 186836

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 61    acgaaacgaaacgaaacaaa 80
             ||||||||||||||||||||
Sbjct: 15588 acgaaacgaaacgaaacaaa 15607



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>gb|AC117767.13| Mus musculus chromosome 1, clone RP24-507O16, complete sequence
          Length = 192892

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 61    acgaaacgaaacgaaacaaa 80
             ||||||||||||||||||||
Sbjct: 83544 acgaaacgaaacgaaacaaa 83525



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>gb|AC140111.3| Mus musculus BAC clone RP23-16F4 from 12, complete sequence
          Length = 175729

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 61     acgaaacgaaacgaaacaaa 80
              ||||||||||||||||||||
Sbjct: 162443 acgaaacgaaacgaaacaaa 162462



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>gb|AC126269.3| Mus musculus BAC clone RP23-230D6 from 12, complete sequence
          Length = 184181

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 61    acgaaacgaaacgaaacaaa 80
             ||||||||||||||||||||
Sbjct: 24532 acgaaacgaaacgaaacaaa 24551



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>emb|AL807784.11| Mouse DNA sequence from clone RP23-448C18 on chromosome X, complete
             sequence
          Length = 127196

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 61    acgaaacgaaacgaaacaaa 80
             ||||||||||||||||||||
Sbjct: 36807 acgaaacgaaacgaaacaaa 36788



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>emb|AL596456.15| Mouse DNA sequence from clone RP23-353K20 on chromosome 11, complete
              sequence
          Length = 228428

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 61     acgaaacgaaacgaaacaaa 80
              ||||||||||||||||||||
Sbjct: 118895 acgaaacgaaacgaaacaaa 118914



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>emb|AL606908.10| Mouse DNA sequence from clone RP23-273D6 on chromosome 4, complete
            sequence
          Length = 212360

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 61   acgaaacgaaacgaaacaaa 80
            ||||||||||||||||||||
Sbjct: 5070 acgaaacgaaacgaaacaaa 5089



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>emb|AL671917.8| Mouse DNA sequence from clone RP23-217I18 on chromosome 3, complete
             sequence
          Length = 172826

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 243   aaatattagtcaacaatggt 262
             ||||||||||||||||||||
Sbjct: 59691 aaatattagtcaacaatggt 59710



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>emb|AL731705.11| Mouse DNA sequence from clone RP23-72M11 on chromosome X, complete
             sequence
          Length = 119774

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 61    acgaaacgaaacgaaacaaa 80
             ||||||||||||||||||||
Sbjct: 68054 acgaaacgaaacgaaacaaa 68035


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,644,261
Number of Sequences: 3902068
Number of extensions: 3644261
Number of successful extensions: 62661
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 62273
Number of HSP's gapped (non-prelim): 388
length of query: 394
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 372
effective length of database: 17,147,199,772
effective search space: 6378758315184
effective search space used: 6378758315184
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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