Clone Name | rbastl26h10 |
---|---|
Clone Library Name | barley_pub |
>EXP9_STRR6 (P0A4D8) Probable ATP-dependent RNA helicase exp9 (EC 3.6.1.-)| (Exported protein 9) Length = 524 Score = 30.0 bits (66), Expect = 1.4 Identities = 17/51 (33%), Positives = 24/51 (47%) Frame = +2 Query: 197 LDKNPSVFIYNQKIPSNPLRYLH*GGRYSRAPMIRSAVDAALPHGNGLLGI 349 LD + +YN IP +P Y+H GR RA ++ P+ G L I Sbjct: 303 LDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKSGQSITFVAPNEMGYLQI 353
>EXP9_STRPN (P0A4D7) Probable ATP-dependent RNA helicase exp9 (EC 3.6.1.-)| (Exported protein 9) Length = 524 Score = 30.0 bits (66), Expect = 1.4 Identities = 17/51 (33%), Positives = 24/51 (47%) Frame = +2 Query: 197 LDKNPSVFIYNQKIPSNPLRYLH*GGRYSRAPMIRSAVDAALPHGNGLLGI 349 LD + +YN IP +P Y+H GR RA ++ P+ G L I Sbjct: 303 LDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKSGQSITFVAPNEMGYLQI 353
>ERB1_HUMAN (P60509) HERV-R(b)_3p24.3 provirus ancestral Env polyprotein| precursor (Envelope polyprotein) (HERV-R(b) Env protein) [Includes: Surface protein domain (SU); Transmembrane protein domain (TM)] Length = 514 Score = 28.5 bits (62), Expect = 4.2 Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 4/48 (8%) Frame = -3 Query: 273 PP*CKYRRGL----DGIFWL*MKTEGFLSKLLPLC*SPHAAENHCLRN 142 P +YR G DG WL T+G LS++ PLC NH L N Sbjct: 180 PQNTQYRNGFLQIWDGFIWL-TATKGHLSQIAPLC---WEQRNHSLDN 223
>PGM_ASPOR (P57749) Phosphoglucomutase (EC 5.4.2.2) (Glucose phosphomutase)| (PGM) Length = 555 Score = 27.3 bits (59), Expect = 9.3 Identities = 12/32 (37%), Positives = 21/32 (65%) Frame = -2 Query: 298 DHRRSGVSAPLV*IPEGVRRDFLVVDEDGRIF 203 ++ S +++ L+ IPEG + FLV+ DGR + Sbjct: 32 NYSESFITSILLSIPEGAKDAFLVIGGDGRYY 63
>AT221_EMENI (Q5AW93) Autophagy-related protein 22-1| Length = 580 Score = 27.3 bits (59), Expect = 9.3 Identities = 10/19 (52%), Positives = 15/19 (78%) Frame = -1 Query: 329 HGAVRRQLLIGSSALGSIC 273 HG+ R+ LL+ +A+GSIC Sbjct: 129 HGSYRKTLLVSFAAIGSIC 147
>O51H1_HUMAN (Q8NH63) Olfactory receptor 51H1| Length = 302 Score = 27.3 bits (59), Expect = 9.3 Identities = 16/48 (33%), Positives = 22/48 (45%) Frame = -1 Query: 182 VSRPMPLRTTVYETCSVHCDFFLLFFAPICGTCSLLLRVYHVRIVFIH 39 VSR L+T TC H LLF+ P G S++ R + +H Sbjct: 231 VSRGERLKTL--STCLSHMSTVLLFYVPFMGAASMIHRFWEHLSPVVH 276
>YCF2_ADICA (Q85B60) Protein ycf2| Length = 2104 Score = 27.3 bits (59), Expect = 9.3 Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 2/48 (4%) Frame = -1 Query: 161 RTTVYETCSVHCDFFLLFFAPICGT--CSLLLRVYHVRIVFIHYDTNY 24 R ++ E S+ D+ LFF P C L+ + Y ++ I YD+N+ Sbjct: 1051 RDSIGENWSLLGDYIPLFFTPTWWRYFCDLITKAYPEIVLKISYDSNH 1098 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 54,254,346 Number of Sequences: 219361 Number of extensions: 1105009 Number of successful extensions: 2426 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 2353 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2426 length of database: 80,573,946 effective HSP length: 97 effective length of database: 59,295,929 effective search space used: 1423102296 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)