ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl26h10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY483155.1| Hordeum vulgare putative cellulose synthase catal... 472 e-130
2gb|DQ020207.1| Bambusa oldhamii cellulose synthase BoCesA1a mRNA... 66 8e-08
3gb|DQ020208.1| Bambusa oldhamii cellulose synthase BoCesA1b mRNA... 64 3e-07
4gb|AF200526.1|AF200526 Zea mays cellulose synthase-2 (CesA-2) mR... 60 5e-06
5gb|DQ020209.1| Bambusa oldhamii cellulose synthase BoCesA2 mRNA,... 52 0.001
6gb|AC135426.2| Oryza sativa (japonica cultivar-group) chromosome... 48 0.020
7gb|AC144738.2| Oryza sativa (japonica cultivar-group) chromosome... 48 0.020
8dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.020
9dbj|AK102140.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.020
10dbj|AK100188.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.020
11dbj|AK099281.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.020
12dbj|AK099228.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.020
13dbj|AK098978.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.020
14dbj|AK067967.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.020
15dbj|AK060838.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.020
16dbj|AK060079.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.020
17ref|XM_540001.2| PREDICTED: Canis familiaris similar to ring fin... 44 0.31
18gb|DQ020210.1| Bambusa oldhamii cellulose synthase BoCesA3a mRNA... 44 0.31
19gb|AF200525.1|AF200525 Zea mays cellulose synthase-1 (CesA-1) mR... 44 0.31
20gb|AY110415.1| Zea mays CL1166_1 mRNA sequence 44 0.31
21gb|AF394543.1| Oryza sativa alpha-expansin OsEXPA1 (EXPA1) gene,... 42 1.2
22gb|AY483156.1| Hordeum vulgare putative cellulose synthase catal... 42 1.2
23emb|AL355333.18| Human DNA sequence from clone RP11-575N15 on ch... 42 1.2
24emb|AL353764.9| Human DNA sequence from clone RP11-440G5 on chro... 42 1.2
25dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
26emb|AL731598.2|OSJN00248 Oryza sativa genomic DNA, chromosome 4,... 42 1.2
27ref|NM_123746.2| Arabidopsis thaliana unknown protein AT5G43790 ... 40 4.9
28gb|AC147054.4| Pan troglodytes BAC clone RP43-145A1 from 7, comp... 40 4.9
29gb|DP000012.1| Macropus eugenii target 1 genomic scaffold 40 4.9
30gb|AC122388.5| Mus musculus BAC clone RP24-80J12 from chromosome... 40 4.9
31gb|AC098883.3| Mus musculus BAC clone RP23-122F3 from 16, comple... 40 4.9
32emb|AL353709.15| Human DNA sequence from clone RP11-379L12 on ch... 40 4.9
33emb|AL157814.14| Human DNA sequence from clone RP11-285E18 on ch... 40 4.9
34gb|AC154393.8| Mus musculus chromosome 1, clone RP23-64O1, compl... 40 4.9
35gb|AY124001.1| Arabidopsis thaliana AT5g43790/MQD19_14 mRNA sequ... 40 4.9
36gb|AC108056.3| Homo sapiens BAC clone RP11-366I1 from 4, complet... 40 4.9
37gb|AC097520.2| Homo sapiens BAC clone RP11-562F9 from 4, complet... 40 4.9
38gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome 40 4.9
39emb|BX831756.1|CNS0A0VX Arabidopsis thaliana Full-length cDNA Co... 40 4.9
40emb|BX831725.1|CNS0A0XT Arabidopsis thaliana Full-length cDNA Co... 40 4.9
41dbj|AB026651.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 4.9
42gb|AC147533.3| Macropus eugenii clone ME_KBa-311C4, complete seq... 40 4.9
43gb|AC101944.16| Mus musculus chromosome 1, clone RP24-118B6, com... 40 4.9 
>gb|AY483155.1| Hordeum vulgare putative cellulose synthase catalytic subunit (CesA6)
            mRNA, complete cds
          Length = 3745

 Score =  472 bits (238), Expect = e-130
 Identities = 241/242 (99%)
 Strand = Plus / Minus

                                                                        
Query: 124  tcacaatgtacactgcaggtttcgtagacagtggttctcagcggcatggggcgactaaca 183
            ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3606 tcacaatgtacgctgcaggtttcgtagacagtggttctcagcggcatggggcgactaaca 3547

                                                                        
Query: 184  aaggggcaataatttagataaaaatccttccgtcttcatctacaaccaaaaaatcccgtc 243
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3546 aaggggcaataatttagataaaaatccttccgtcttcatctacaaccaaaaaatcccgtc 3487

                                                                        
Query: 244  taaccccctccggtatttacactaggggggcagatactcccgagcgccgatgatccgatc 303
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3486 taaccccctccggtatttacactaggggggcagatactcccgagcgccgatgatccgatc 3427

                                                                        
Query: 304  agcagttgacgccgcactgccccatggcaacggccttctgggtatcggaaatgaaagggt 363
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3426 agcagttgacgccgcactgccccatggcaacggccttctgggtatcggaaatgaaagggt 3367

              
Query: 364  cg 365
            ||
Sbjct: 3366 cg 3365



 Score =  198 bits (100), Expect = 9e-48
 Identities = 103/104 (99%)
 Strand = Plus / Minus

                                                                        
Query: 1    gatgcaacagctgccttatataaatagttggtgtcatagtgtataaatacaattctgaca 60
            ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 3729 gatgcaacagctgccttatataaattgttggtgtcatagtgtataaatacaattctgaca 3670

                                                        
Query: 61   tgatatactctaagcaacaaagaacaggtaccacaaatgggggc 104
            ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3669 tgatatactctaagcaacaaagaacaggtaccacaaatgggggc 3626
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>gb|DQ020207.1| Bambusa oldhamii cellulose synthase BoCesA1a mRNA, complete cds
          Length = 3547

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                        
Query: 301  atcagcagttgacgccgcactgccccatggcaacggccttctgggtatcggaaatgaaag 360
            |||||||||| || ||||||||||||| ||| ||||| |||||||||  ||| |||||||
Sbjct: 3254 atcagcagttcacaccgcactgccccaaggcgacggctttctgggtaggggatatgaaag 3195

                 
Query: 361  ggtcg 365
            |||||
Sbjct: 3194 ggtcg 3190



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 46/50 (92%), Gaps = 1/50 (2%)
 Strand = Plus / Minus

                                                              
Query: 216  tcttcatctacaaccaaaaaatcccgtctaaccccctccggtatttacac 265
            |||||||||||||| |||||||||| || ||||||||| |||||||||||
Sbjct: 3351 tcttcatctacaac-aaaaaatcccatccaaccccctcaggtatttacac 3303
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>gb|DQ020208.1| Bambusa oldhamii cellulose synthase BoCesA1b mRNA, complete cds
          Length = 3453

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 59/68 (86%)
 Strand = Plus / Minus

                                                                        
Query: 298  ccgatcagcagttgacgccgcactgccccatggcaacggccttctgggtatcggaaatga 357
            ||||| ||||||| || ||||||||||||| ||||||||| ||||| |||  ||| ||||
Sbjct: 3414 ccgattagcagttcacaccgcactgccccaaggcaacggctttctgagtaggggatatga 3355

                    
Query: 358  aagggtcg 365
            ||||||||
Sbjct: 3354 aagggtcg 3347
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>gb|AF200526.1|AF200526 Zea mays cellulose synthase-2 (CesA-2) mRNA, complete cds
          Length = 3725

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                  
Query: 219  tcatctacaaccaaaaaatcccgtctaaccccctccggtatttacactaggggg 272
            ||||||||||| ||||| |||| |||| ||||||| ||||||||||| ||||||
Sbjct: 3501 tcatctacaacaaaaaattcccatctagccccctcaggtatttacacgaggggg 3448
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>gb|DQ020209.1| Bambusa oldhamii cellulose synthase BoCesA2 mRNA, complete cds
          Length = 3648

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                          
Query: 302  tcagcagttgacgccgcactgccccatggcaacggccttctgggta 347
            ||||||||| || ||||||||||||| |||||| || |||||||||
Sbjct: 3325 tcagcagtttacaccgcactgccccaaggcaacagctttctgggta 3280



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 233  aaaatcccgtctaaccccctccggtatttacactagggggg 273
            |||||| | ||||||| |||| ||||||||||| |||||||
Sbjct: 3417 aaaatcacatctaaccacctctggtatttacacgagggggg 3377
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>gb|AC135426.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0617A08,
              complete sequence
          Length = 144781

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 54/64 (84%)
 Strand = Plus / Plus

                                                                          
Query: 298    ccgatcagcagttgacgccgcactgccccatggcaacggccttctgggtatcggaaatga 357
              ||||||||||||| || ||||| ||||||| ||| ||||| ||||| |||   |||||||
Sbjct: 128287 ccgatcagcagttcacaccgcattgccccaaggcgacggctttctgagtaggcgaaatga 128346

                  
Query: 358    aagg 361
              ||||
Sbjct: 128347 aagg 128350
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>gb|AC144738.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0029B02, complete sequence
          Length = 156649

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 54/64 (84%)
 Strand = Plus / Plus

                                                                         
Query: 298   ccgatcagcagttgacgccgcactgccccatggcaacggccttctgggtatcggaaatga 357
             ||||||||||||| || ||||| ||||||| ||| ||||| ||||| |||   |||||||
Sbjct: 17130 ccgatcagcagttcacaccgcattgccccaaggcgacggctttctgagtaggcgaaatga 17189

                 
Query: 358   aagg 361
             ||||
Sbjct: 17190 aagg 17193
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 54/64 (84%)
 Strand = Plus / Plus

                                                                           
Query: 298     ccgatcagcagttgacgccgcactgccccatggcaacggccttctgggtatcggaaatga 357
               ||||||||||||| || ||||| ||||||| ||| ||||| ||||| |||   |||||||
Sbjct: 4506663 ccgatcagcagttcacaccgcattgccccaaggcgacggctttctgagtaggcgaaatga 4506722

                   
Query: 358     aagg 361
               ||||
Sbjct: 4506723 aagg 4506726
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>dbj|AK102140.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033085K01, full
            insert sequence
          Length = 3768

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 54/64 (84%)
 Strand = Plus / Minus

                                                                        
Query: 298  ccgatcagcagttgacgccgcactgccccatggcaacggccttctgggtatcggaaatga 357
            ||||||||||||| || ||||| ||||||| ||| ||||| ||||| |||   |||||||
Sbjct: 3421 ccgatcagcagttcacaccgcattgccccaaggcgacggctttctgagtaggcgaaatga 3362

                
Query: 358  aagg 361
            ||||
Sbjct: 3361 aagg 3358
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>dbj|AK100188.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023034D20, full
            insert sequence
          Length = 3897

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 54/64 (84%)
 Strand = Plus / Minus

                                                                        
Query: 298  ccgatcagcagttgacgccgcactgccccatggcaacggccttctgggtatcggaaatga 357
            ||||||||||||| || ||||| ||||||| ||| ||||| ||||| |||   |||||||
Sbjct: 3421 ccgatcagcagttcacaccgcattgccccaaggcgacggctttctgagtaggcgaaatga 3362

                
Query: 358  aagg 361
            ||||
Sbjct: 3361 aagg 3358
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>dbj|AK099281.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023125F05, full
            insert sequence
          Length = 3801

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 54/64 (84%)
 Strand = Plus / Minus

                                                                        
Query: 298  ccgatcagcagttgacgccgcactgccccatggcaacggccttctgggtatcggaaatga 357
            ||||||||||||| || ||||| ||||||| ||| ||||| ||||| |||   |||||||
Sbjct: 3421 ccgatcagcagttcacaccgcattgccccaaggcgacggctttctgagtaggcgaaatga 3362

                
Query: 358  aagg 361
            ||||
Sbjct: 3361 aagg 3358
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>dbj|AK099228.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091P03, full
            insert sequence
          Length = 3732

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 54/64 (84%)
 Strand = Plus / Minus

                                                                        
Query: 298  ccgatcagcagttgacgccgcactgccccatggcaacggccttctgggtatcggaaatga 357
            ||||||||||||| || ||||| ||||||| ||| ||||| ||||| |||   |||||||
Sbjct: 3421 ccgatcagcagttcacaccgcattgccccaaggcgacggctttctgagtaggcgaaatga 3362

                
Query: 358  aagg 361
            ||||
Sbjct: 3361 aagg 3358
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>dbj|AK098978.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013092B06, full
            insert sequence
          Length = 3764

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 54/64 (84%)
 Strand = Plus / Minus

                                                                        
Query: 298  ccgatcagcagttgacgccgcactgccccatggcaacggccttctgggtatcggaaatga 357
            ||||||||||||| || ||||| ||||||| ||| ||||| ||||| |||   |||||||
Sbjct: 3421 ccgatcagcagttcacaccgcattgccccaaggcgacggctttctgagtaggcgaaatga 3362

                
Query: 358  aagg 361
            ||||
Sbjct: 3361 aagg 3358
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>dbj|AK067967.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013125H24, full
            insert sequence
          Length = 3802

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 54/64 (84%)
 Strand = Plus / Minus

                                                                        
Query: 298  ccgatcagcagttgacgccgcactgccccatggcaacggccttctgggtatcggaaatga 357
            ||||||||||||| || ||||| ||||||| ||| ||||| ||||| |||   |||||||
Sbjct: 3421 ccgatcagcagttcacaccgcattgccccaaggcgacggctttctgagtaggcgaaatga 3362

                
Query: 358  aagg 361
            ||||
Sbjct: 3361 aagg 3358
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>dbj|AK060838.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D02, full
            insert sequence
          Length = 1426

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 54/64 (84%)
 Strand = Plus / Minus

                                                                        
Query: 298  ccgatcagcagttgacgccgcactgccccatggcaacggccttctgggtatcggaaatga 357
            ||||||||||||| || ||||| ||||||| ||| ||||| ||||| |||   |||||||
Sbjct: 1098 ccgatcagcagttcacaccgcattgccccaaggcgacggctttctgagtaggcgaaatga 1039

                
Query: 358  aagg 361
            ||||
Sbjct: 1038 aagg 1035
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>dbj|AK060079.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-C08, full
           insert sequence
          Length = 1097

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 54/64 (84%)
 Strand = Plus / Minus

                                                                       
Query: 298 ccgatcagcagttgacgccgcactgccccatggcaacggccttctgggtatcggaaatga 357
           ||||||||||||| || ||||| ||||||| ||| ||||| ||||| |||   |||||||
Sbjct: 672 ccgatcagcagttcacaccgcattgccccaaggcgacggctttctgagtaggcgaaatga 613

               
Query: 358 aagg 361
           ||||
Sbjct: 612 aagg 609
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>ref|XM_540001.2| PREDICTED: Canis familiaris similar to ring finger protein 127
            (LOC482886), mRNA
          Length = 3897

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 210  cttccgtcttcatctacaacca 231
            ||||||||||||||||||||||
Sbjct: 1739 cttccgtcttcatctacaacca 1718
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>gb|DQ020210.1| Bambusa oldhamii cellulose synthase BoCesA3a mRNA, complete cds
          Length = 3571

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                          
Query: 302  tcagcagttgacgccgcactgccccatggcaacggccttctgggta 347
            ||||||||| || ||||||||||||| ||  ||||| |||||||||
Sbjct: 3304 tcagcagtttacaccgcactgccccagggtgacggctttctgggta 3259
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>gb|AF200525.1|AF200525 Zea mays cellulose synthase-1 (CesA-1) mRNA, complete cds
          Length = 3752

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 299  cgatcagcagttgacgccgcactgccccatggca 332
            |||||||||||||||||| || ||||||| ||||
Sbjct: 3413 cgatcagcagttgacgccacattgccccaaggca 3380
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>gb|AY110415.1| Zea mays CL1166_1 mRNA sequence
          Length = 3898

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 299  cgatcagcagttgacgccgcactgccccatggca 332
            |||||||||||||||||| || ||||||| ||||
Sbjct: 3419 cgatcagcagttgacgccacattgccccaaggca 3386
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>gb|AF394543.1| Oryza sativa alpha-expansin OsEXPA1 (EXPA1) gene, complete cds
          Length = 2637

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 189 gcaataatttagataaaaatc 209
           |||||||||||||||||||||
Sbjct: 740 gcaataatttagataaaaatc 760
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>gb|AY483156.1| Hordeum vulgare putative cellulose synthase catalytic subunit (CesA8)
            mRNA, partial cds
          Length = 1255

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 299  cgatcagcagttgacgccgcactgc 323
            |||||||||||||| ||||||||||
Sbjct: 1093 cgatcagcagttgatgccgcactgc 1069
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>emb|AL355333.18| Human DNA sequence from clone RP11-575N15 on chromosome 10, complete
              sequence
          Length = 180545

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 70     ctaagcaacaaagaacaggta 90
              |||||||||||||||||||||
Sbjct: 106696 ctaagcaacaaagaacaggta 106716
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>emb|AL353764.9| Human DNA sequence from clone RP11-440G5 on chromosome 9 Contains the
              NFIL3 gene for interleukin 3 regulated nuclear factor, a
              novel gene and two CpG islands, complete sequence
          Length = 170898

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 18     atataaatagttggtgtcata 38
              |||||||||||||||||||||
Sbjct: 112748 atataaatagttggtgtcata 112768
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 189     gcaataatttagataaaaatc 209
               |||||||||||||||||||||
Sbjct: 8556250 gcaataatttagataaaaatc 8556270
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>emb|AL731598.2|OSJN00248 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0065B15,
             complete sequence
          Length = 150007

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 189   gcaataatttagataaaaatc 209
             |||||||||||||||||||||
Sbjct: 16693 gcaataatttagataaaaatc 16713
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>ref|NM_123746.2| Arabidopsis thaliana unknown protein AT5G43790 mRNA, complete cds
          Length = 1475

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 206 aatccttccgtcttcatctacaac 229
           ||||||||||||||| ||||||||
Sbjct: 202 aatccttccgtcttcctctacaac 225
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>gb|AC147054.4| Pan troglodytes BAC clone RP43-145A1 from 7, complete sequence
          Length = 153627

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 20    ataaatagttggtgtcatag 39
             ||||||||||||||||||||
Sbjct: 64706 ataaatagttggtgtcatag 64687
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>gb|DP000012.1| Macropus eugenii target 1 genomic scaffold
          Length = 1996640

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 189    gcaataatttagataaaaat 208
              ||||||||||||||||||||
Sbjct: 836324 gcaataatttagataaaaat 836305
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>gb|AC122388.5| Mus musculus BAC clone RP24-80J12 from chromosome 16, complete sequence
          Length = 214268

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 194    aatttagataaaaatccttc 213
              ||||||||||||||||||||
Sbjct: 145940 aatttagataaaaatccttc 145959
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>gb|AC098883.3| Mus musculus BAC clone RP23-122F3 from 16, complete sequence
          Length = 211348

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 194    aatttagataaaaatccttc 213
              ||||||||||||||||||||
Sbjct: 182268 aatttagataaaaatccttc 182249
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>emb|AL353709.15| Human DNA sequence from clone RP11-379L12 on chromosome 1, complete
             sequence
          Length = 133418

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 32    tgtcatagtgtataaataca 51
             ||||||||||||||||||||
Sbjct: 55070 tgtcatagtgtataaataca 55089
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>emb|AL157814.14| Human DNA sequence from clone RP11-285E18 on chromosome 13q22.1-22.3
             Contains a novel gene, complete sequence
          Length = 111350

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 44    taaatacaattctgacatga 63
             ||||||||||||||||||||
Sbjct: 28757 taaatacaattctgacatga 28776
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>gb|AC154393.8| Mus musculus chromosome 1, clone RP23-64O1, complete sequence
          Length = 253733

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 125   cacaatgtacactgcaggtt 144
             ||||||||||||||||||||
Sbjct: 24735 cacaatgtacactgcaggtt 24716
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>gb|AY124001.1| Arabidopsis thaliana AT5g43790/MQD19_14 mRNA sequence
          Length = 1379

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 206 aatccttccgtcttcatctacaac 229
           ||||||||||||||| ||||||||
Sbjct: 106 aatccttccgtcttcctctacaac 129
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>gb|AC108056.3| Homo sapiens BAC clone RP11-366I1 from 4, complete sequence
          Length = 174916

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 150    gacagtggttctcagcggca 169
              ||||||||||||||||||||
Sbjct: 118421 gacagtggttctcagcggca 118440
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>gb|AC097520.2| Homo sapiens BAC clone RP11-562F9 from 4, complete sequence
          Length = 173479

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 43    ataaatacaattctgacatgatat 66
             |||||||||||| |||||||||||
Sbjct: 81415 ataaatacaattatgacatgatat 81392
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>gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome
          Length = 2628784

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 285     gagcgccgatgatccgatcagcag 308
               |||||| |||||||||||||||||
Sbjct: 2092163 gagcgcagatgatccgatcagcag 2092186
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>emb|BX831756.1|CNS0A0VX Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH28ZC04 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1431

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 206 aatccttccgtcttcatctacaac 229
           ||||||||||||||| ||||||||
Sbjct: 193 aatccttccgtcttcctctacaac 216
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>emb|BX831725.1|CNS0A0XT Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH26ZB11 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1449

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 206 aatccttccgtcttcatctacaac 229
           ||||||||||||||| ||||||||
Sbjct: 192 aatccttccgtcttcctctacaac 215
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>dbj|AB026651.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQD19
          Length = 87286

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 206   aatccttccgtcttcatctacaac 229
             ||||||||||||||| ||||||||
Sbjct: 48171 aatccttccgtcttcctctacaac 48148
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>gb|AC147533.3| Macropus eugenii clone ME_KBa-311C4, complete sequence
          Length = 153357

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 189    gcaataatttagataaaaat 208
              ||||||||||||||||||||
Sbjct: 139330 gcaataatttagataaaaat 139311
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>gb|AC101944.16| Mus musculus chromosome 1, clone RP24-118B6, complete sequence
          Length = 174560

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 125    cacaatgtacactgcaggtt 144
              ||||||||||||||||||||
Sbjct: 158820 cacaatgtacactgcaggtt 158801


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,723,155
Number of Sequences: 3902068
Number of extensions: 2723155
Number of successful extensions: 47723
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 47616
Number of HSP's gapped (non-prelim): 106
length of query: 365
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 343
effective length of database: 17,147,199,772
effective search space: 5881489521796
effective search space used: 5881489521796
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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