Clone Name | rbastl26h08 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | MIAA_HELPY (O25961) tRNA delta(2)-isopentenylpyrophosphate trans... | 30 | 1.4 | 2 | MIAA_HELPJ (Q9ZJJ7) tRNA delta(2)-isopentenylpyrophosphate trans... | 30 | 1.8 | 3 | MTR1B_MOUSE (Q8CIQ6) Melatonin receptor type 1B (Mel-1B-R) (Mel1... | 29 | 3.1 | 4 | MPP9_HUMAN (Q99550) M-phase phosphoprotein 9 | 28 | 4.0 | 5 | GPR82_HUMAN (Q96P67) Probable G-protein coupled receptor 82 | 28 | 6.9 |
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>MIAA_HELPY (O25961) tRNA delta(2)-isopentenylpyrophosphate transferase (EC| 2.5.1.8) (IPP transferase) (Isopentenyl-diphosphate:tRNA isopentenyltransferase) (IPTase) (IPPT) Length = 311 Score = 30.0 bits (66), Expect = 1.4 Identities = 12/22 (54%), Positives = 14/22 (63%) Frame = +1 Query: 190 LQILYATTTPPMRYVQPNDNKP 255 L+I YAT TPP Y + N KP Sbjct: 170 LEIFYATCTPPSEYFKANPKKP 191
>MIAA_HELPJ (Q9ZJJ7) tRNA delta(2)-isopentenylpyrophosphate transferase (EC| 2.5.1.8) (IPP transferase) (Isopentenyl-diphosphate:tRNA isopentenyltransferase) (IPTase) (IPPT) Length = 312 Score = 29.6 bits (65), Expect = 1.8 Identities = 12/22 (54%), Positives = 14/22 (63%) Frame = +1 Query: 190 LQILYATTTPPMRYVQPNDNKP 255 L+I YAT TPP Y + N KP Sbjct: 170 LEIFYATHTPPSEYFKANPKKP 191
>MTR1B_MOUSE (Q8CIQ6) Melatonin receptor type 1B (Mel-1B-R) (Mel1b melatonin| receptor) Length = 364 Score = 28.9 bits (63), Expect = 3.1 Identities = 12/20 (60%), Positives = 12/20 (60%) Frame = +3 Query: 27 CIVHSTTIHVTASHQTKPIY 86 CI HSTT H SH PIY Sbjct: 141 CICHSTTYHRVCSHWYTPIY 160
>MPP9_HUMAN (Q99550) M-phase phosphoprotein 9| Length = 692 Score = 28.5 bits (62), Expect = 4.0 Identities = 14/46 (30%), Positives = 23/46 (50%) Frame = +2 Query: 11 QLDKEMYCSFNHNTCHRITPNQANIFCTG*ISYKGLITQRIPYSIF 148 Q++ E S HN+ + P++AN T +S + + YSIF Sbjct: 440 QVEHENMLSLRHNSRIHVRPSRANTLATSDVSRRKWLIPGAEYSIF 485
>GPR82_HUMAN (Q96P67) Probable G-protein coupled receptor 82| Length = 336 Score = 27.7 bits (60), Expect = 6.9 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 3/51 (5%) Frame = +1 Query: 70 KPSQYILHRIDKLQRVNY---TKNTLFYILNTSCDSQGTSPPFLQILYATT 213 KP Y+LH+ D Q++NY TKN IL ++ ++ P + +L T Sbjct: 269 KPIFYVLHQRDNCQQLNYLIETKN----ILTCLASARSSTDPIIFLLLDKT 315 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 59,193,196 Number of Sequences: 219361 Number of extensions: 1143840 Number of successful extensions: 2439 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 2400 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2439 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 1365190992 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)