ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl26h08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_479218.1| Oryza sativa (japonica cultivar-group), mRNA 74 4e-10
2dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 74 4e-10
3dbj|AP004306.3| Oryza sativa (japonica cultivar-group) genomic D... 74 4e-10
4dbj|AK063426.1| Oryza sativa (japonica cultivar-group) cDNA clon... 74 4e-10
5dbj|AP004009.3| Oryza sativa (japonica cultivar-group) genomic D... 74 4e-10
6gb|BT019005.1| Zea mays clone Contig495.F mRNA sequence 46 0.086
7gb|AC115360.6| Mus musculus BAC clone RP23-191N22 from chromosom... 42 1.4
8ref|XM_759432.1| Theileria parva strain Muguga chromosome 4 hypo... 42 1.4
9emb|CR931802.8| Zebrafish DNA sequence from clone CH211-223A10 i... 42 1.4
10gb|AC110782.2| Homo sapiens BAC clone RP11-389H18 from 2, comple... 42 1.4
11gb|AC101774.6| Mus musculus chromosome 19, clone RP24-113J17, co... 42 1.4
12gb|CP000188.1| Drosophila melanogaster genomic scaffold 21100002... 42 1.4
13gb|AC127350.3| Mus musculus BAC clone RP23-64P14 from chromosome... 40 5.3
14gb|AC122294.2| Mus musculus BAC clone RP23-259F3 from 19, comple... 40 5.3
15gb|AC101735.8| Mus musculus chromosome 19, clone RP23-426K3, com... 40 5.3
16gb|AC158393.2| Mus musculus BAC clone RP23-368G21 from chromosom... 40 5.3
17emb|AL627231.9| Human DNA sequence from clone RP13-147D17 on chr... 40 5.3
18gb|AC023702.4| Drosophila melanogaster X BAC RP98-24L2 (Roswell ... 40 5.3
19gb|AC093310.3| Homo sapiens chromosome 5 clone RP11-9C14, comple... 40 5.3
20gb|AC113386.2| Homo sapiens chromosome 5 clone RP11-350H19, comp... 40 5.3
21gb|AC093839.3| Homo sapiens BAC clone RP11-433K16 from 4, comple... 40 5.3
22gb|AC091898.2| Homo sapiens chromosome 5 clone RP11-152K4, compl... 40 5.3
23dbj|AP008934.1| Staphylococcus saprophyticus subsp. saprophyticu... 40 5.3
24dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
25dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
26gb|AC015982.9| Homo sapiens BAC clone RP11-554J4 from 2, complet... 40 5.3
27gb|AC073909.25| Homo sapiens X BAC RP11-759L5 (Roswell Park Canc... 40 5.3
28dbj|AP004675.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
29dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome 40 5.3
30dbj|AP005397.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
31dbj|AK172743.1| Homo sapiens cDNA FLJ23904 fis, clone ADKA02692 40 5.3
32emb|CT009495.13| Mouse DNA sequence from clone RP23-127E21 on ch... 40 5.3
33gb|AE003448.4| Drosophila melanogaster chromosome X, section 32 ... 40 5.3
34gb|AC006120.1|AC006120 Homo sapiens chromosome 17, clone hRPK.34... 40 5.3
35gb|AC151531.3| Mus musculus BAC clone RP24-387D22 from chromosom... 40 5.3
36gb|AC004087.1|AC004087 Homo sapiens Xp22 GSHB-314C4 (Genome Syst... 40 5.3
37gb|AC132465.3| Mus musculus BAC clone RP23-58D1 from 10, complet... 40 5.3
38emb|Y08208.1|HITRNA H.inermis mitochondrial tRNA-Thr, tRNA-Pro, ... 40 5.3
39emb|AL627087.11| Mouse DNA sequence from clone RP23-243K17 on ch... 40 5.3
40emb|Z84465.5|HS209H1 Human DNA sequence from clone RP1-209H1 on ... 40 5.3
41gb|AC166160.3| Mus musculus BAC clone RP24-86O19 from chromosome... 40 5.3 
>ref|XM_479218.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2281

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 40/41 (97%)
 Strand = Plus / Minus

                                                     
Query: 203  atgctactacaacaccgccaatgcgatatgtacaaccaaac 243
            |||||||||||||||||||||||| ||||||||||||||||
Sbjct: 2115 atgctactacaacaccgccaatgcaatatgtacaaccaaac 2075



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 46/50 (92%), Gaps = 2/50 (4%)
 Strand = Plus / Minus

                                                              
Query: 115  gttaattacacaaagaatac--cttattctatattttgaatacaagctgt 162
            |||||||||||||||||||   |||||||||||||||| |||||||||||
Sbjct: 2206 gttaattacacaaagaatagtacttattctatattttggatacaagctgt 2157
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 40/41 (97%)
 Strand = Plus / Minus

                                                         
Query: 203      atgctactacaacaccgccaatgcgatatgtacaaccaaac 243
                |||||||||||||||||||||||| ||||||||||||||||
Sbjct: 25949627 atgctactacaacaccgccaatgcaatatgtacaaccaaac 25949587



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 46/50 (92%), Gaps = 2/50 (4%)
 Strand = Plus / Minus

                                                                  
Query: 115      gttaattacacaaagaatac--cttattctatattttgaatacaagctgt 162
                |||||||||||||||||||   |||||||||||||||| |||||||||||
Sbjct: 25949718 gttaattacacaaagaatagtacttattctatattttggatacaagctgt 25949669
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>dbj|AP004306.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0506F02
          Length = 151612

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 40/41 (97%)
 Strand = Plus / Minus

                                                      
Query: 203   atgctactacaacaccgccaatgcgatatgtacaaccaaac 243
             |||||||||||||||||||||||| ||||||||||||||||
Sbjct: 26639 atgctactacaacaccgccaatgcaatatgtacaaccaaac 26599



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 46/50 (92%), Gaps = 2/50 (4%)
 Strand = Plus / Minus

                                                               
Query: 115   gttaattacacaaagaatac--cttattctatattttgaatacaagctgt 162
             |||||||||||||||||||   |||||||||||||||| |||||||||||
Sbjct: 26730 gttaattacacaaagaatagtacttattctatattttggatacaagctgt 26681
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>dbj|AK063426.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-D02, full
            insert sequence
          Length = 2281

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 40/41 (97%)
 Strand = Plus / Minus

                                                     
Query: 203  atgctactacaacaccgccaatgcgatatgtacaaccaaac 243
            |||||||||||||||||||||||| ||||||||||||||||
Sbjct: 2115 atgctactacaacaccgccaatgcaatatgtacaaccaaac 2075



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 46/50 (92%), Gaps = 2/50 (4%)
 Strand = Plus / Minus

                                                              
Query: 115  gttaattacacaaagaatac--cttattctatattttgaatacaagctgt 162
            |||||||||||||||||||   |||||||||||||||| |||||||||||
Sbjct: 2206 gttaattacacaaagaatagtacttattctatattttggatacaagctgt 2157
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>dbj|AP004009.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1339_F05
          Length = 132708

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 40/41 (97%)
 Strand = Plus / Minus

                                                       
Query: 203    atgctactacaacaccgccaatgcgatatgtacaaccaaac 243
              |||||||||||||||||||||||| ||||||||||||||||
Sbjct: 120075 atgctactacaacaccgccaatgcaatatgtacaaccaaac 120035



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 46/50 (92%), Gaps = 2/50 (4%)
 Strand = Plus / Minus

                                                                
Query: 115    gttaattacacaaagaatac--cttattctatattttgaatacaagctgt 162
              |||||||||||||||||||   |||||||||||||||| |||||||||||
Sbjct: 120166 gttaattacacaaagaatagtacttattctatattttggatacaagctgt 120117
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>gb|BT019005.1| Zea mays clone Contig495.F mRNA sequence
          Length = 1401

 Score = 46.1 bits (23), Expect = 0.086
 Identities = 44/50 (88%), Gaps = 2/50 (4%)
 Strand = Plus / Minus

                                                              
Query: 115  gttaattacacaaagaatac--cttattctatattttgaatacaagctgt 162
            ||||||||| |||||||||   ||| |||||||||||||| |||||||||
Sbjct: 1238 gttaattacccaaagaatattactttttctatattttgaacacaagctgt 1189
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>gb|AC115360.6| Mus musculus BAC clone RP23-191N22 from chromosome 19, complete sequence
          Length = 217325

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 128    agaataccttattctatattt 148
              |||||||||||||||||||||
Sbjct: 166812 agaataccttattctatattt 166792
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>ref|XM_759432.1| Theileria parva strain Muguga chromosome 4 hypothetical protein
           (TP04_0888) partial mRNA
          Length = 1068

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 183 cccttttctccaaattttgta 203
           |||||||||||||||||||||
Sbjct: 880 cccttttctccaaattttgta 860
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>emb|CR931802.8| Zebrafish DNA sequence from clone CH211-223A10 in linkage group 13,
             complete sequence
          Length = 136909

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 142   tatattttgaatacaagctgt 162
             |||||||||||||||||||||
Sbjct: 48367 tatattttgaatacaagctgt 48347
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>gb|AC110782.2| Homo sapiens BAC clone RP11-389H18 from 2, complete sequence
          Length = 73796

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 142   tatattttgaatacaagctgt 162
             |||||||||||||||||||||
Sbjct: 37700 tatattttgaatacaagctgt 37680
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>gb|AC101774.6| Mus musculus chromosome 19, clone RP24-113J17, complete sequence
          Length = 209547

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 128    agaataccttattctatattt 148
              |||||||||||||||||||||
Sbjct: 133148 agaataccttattctatattt 133168
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>gb|CP000188.1| Drosophila melanogaster genomic scaffold 211000022279977
          Length = 252652

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 15     ttgataaagaaatgtattgtt 35
              |||||||||||||||||||||
Sbjct: 188419 ttgataaagaaatgtattgtt 188439
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>gb|AC127350.3| Mus musculus BAC clone RP23-64P14 from chromosome 18, complete sequence
          Length = 190228

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 102   taagttacaaagggttaattacac 125
             ||||||||||| ||||||||||||
Sbjct: 21133 taagttacaaatggttaattacac 21110
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>gb|AC122294.2| Mus musculus BAC clone RP23-259F3 from 19, complete sequence
          Length = 160892

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 351    agatctagggaagtcaaggt 370
              ||||||||||||||||||||
Sbjct: 134099 agatctagggaagtcaaggt 134080
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>gb|AC101735.8| Mus musculus chromosome 19, clone RP23-426K3, complete sequence
          Length = 197927

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 351   agatctagggaagtcaaggt 370
             ||||||||||||||||||||
Sbjct: 65971 agatctagggaagtcaaggt 65952
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>gb|AC158393.2| Mus musculus BAC clone RP23-368G21 from chromosome 14, complete sequence
          Length = 200173

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 343    ttaaaattagatctagggaa 362
              ||||||||||||||||||||
Sbjct: 165518 ttaaaattagatctagggaa 165499
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>emb|AL627231.9| Human DNA sequence from clone RP13-147D17 on chromosome X Contains a
             filamin-binding LIM protein-1 (FBLP-1) pseudogene,
             complete sequence
          Length = 146366

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 126   aaagaataccttattctata 145
             ||||||||||||||||||||
Sbjct: 40877 aaagaataccttattctata 40896
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>gb|AC023702.4| Drosophila melanogaster X BAC RP98-24L2 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 159970

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 232   gtacaaccaaacgacaacaa 251
             ||||||||||||||||||||
Sbjct: 35830 gtacaaccaaacgacaacaa 35849
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>gb|AC093310.3| Homo sapiens chromosome 5 clone RP11-9C14, complete sequence
          Length = 65874

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 374   catgctgaggagcatggcag 393
             ||||||||||||||||||||
Sbjct: 43064 catgctgaggagcatggcag 43083
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>gb|AC113386.2| Homo sapiens chromosome 5 clone RP11-350H19, complete sequence
          Length = 109953

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 180   acccccttttctccaaattt 199
             ||||||||||||||||||||
Sbjct: 28124 acccccttttctccaaattt 28143
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>gb|AC093839.3| Homo sapiens BAC clone RP11-433K16 from 4, complete sequence
          Length = 162522

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 108    acaaagggttaattacacaaagaa 131
              |||||||||||| |||||||||||
Sbjct: 142293 acaaagggttaaatacacaaagaa 142316
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>gb|AC091898.2| Homo sapiens chromosome 5 clone RP11-152K4, complete sequence
          Length = 177709

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 180    acccccttttctccaaattt 199
              ||||||||||||||||||||
Sbjct: 148465 acccccttttctccaaattt 148484
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>dbj|AP008934.1| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 DNA, complete
               genome
          Length = 2516575

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 187     tttctccaaattttgtatgc 206
               ||||||||||||||||||||
Sbjct: 2208674 tttctccaaattttgtatgc 2208693
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 20       aaagaaatgtattgttcatt 39
                ||||||||||||||||||||
Sbjct: 14659484 aaagaaatgtattgttcatt 14659465
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 186      ttttctccaaattttgtatg 205
                ||||||||||||||||||||
Sbjct: 17877897 ttttctccaaattttgtatg 17877916
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>gb|AC015982.9| Homo sapiens BAC clone RP11-554J4 from 2, complete sequence
          Length = 191546

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 114   ggttaattacacaaagaata 133
             ||||||||||||||||||||
Sbjct: 25333 ggttaattacacaaagaata 25352
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>gb|AC073909.25| Homo sapiens X BAC RP11-759L5 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 156411

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 136   ttattctatattttgaatac 155
             ||||||||||||||||||||
Sbjct: 68475 ttattctatattttgaatac 68456
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>dbj|AP004675.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0709D11
          Length = 146856

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 186   ttttctccaaattttgtatg 205
             ||||||||||||||||||||
Sbjct: 99403 ttttctccaaattttgtatg 99422
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>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome
          Length = 6413771

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 184     ccttttctccaaattttgta 203
               ||||||||||||||||||||
Sbjct: 4377120 ccttttctccaaattttgta 4377139
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>dbj|AP005397.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0643D11
          Length = 137525

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 20    aaagaaatgtattgttcatt 39
             ||||||||||||||||||||
Sbjct: 81151 aaagaaatgtattgttcatt 81132
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>dbj|AK172743.1| Homo sapiens cDNA FLJ23904 fis, clone ADKA02692
          Length = 1325

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 180 acccccttttctccaaattt 199
           ||||||||||||||||||||
Sbjct: 764 acccccttttctccaaattt 783
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>emb|CT009495.13| Mouse DNA sequence from clone RP23-127E21 on chromosome 14, complete
             sequence
          Length = 192786

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 343   ttaaaattagatctagggaa 362
             ||||||||||||||||||||
Sbjct: 97233 ttaaaattagatctagggaa 97214
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>gb|AE003448.4| Drosophila melanogaster chromosome X, section 32 of 74 of the
            complete sequence
          Length = 318665

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 232  gtacaaccaaacgacaacaa 251
            ||||||||||||||||||||
Sbjct: 4224 gtacaaccaaacgacaacaa 4243
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>gb|AC006120.1|AC006120 Homo sapiens chromosome 17, clone hRPK.346_K_10, complete sequence
          Length = 168753

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 352   gatctagggaagtcaaggta 371
             ||||||||||||||||||||
Sbjct: 53800 gatctagggaagtcaaggta 53819
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>gb|AC151531.3| Mus musculus BAC clone RP24-387D22 from chromosome 7, complete sequence
          Length = 213801

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 62    atcacaccaaaccaagccaa 81
             ||||||||||||||||||||
Sbjct: 33276 atcacaccaaaccaagccaa 33257
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>gb|AC004087.1|AC004087 Homo sapiens Xp22 GSHB-314C4 (Genome Systems Human BAC library) complete
              sequence
          Length = 124791

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 136    ttattctatattttgaatac 155
              ||||||||||||||||||||
Sbjct: 105659 ttattctatattttgaatac 105640
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>gb|AC132465.3| Mus musculus BAC clone RP23-58D1 from 10, complete sequence
          Length = 218313

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 62    atcacaccaaaccaagccaa 81
             ||||||||||||||||||||
Sbjct: 96938 atcacaccaaaccaagccaa 96919
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>emb|Y08208.1|HITRNA H.inermis mitochondrial tRNA-Thr, tRNA-Pro, tRNA-Phe genes and
           12SrRNA gene, partial
          Length = 1546

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 343 ttaaaattagatctagggaa 362
           ||||||||||||||||||||
Sbjct: 980 ttaaaattagatctagggaa 961
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>emb|AL627087.11| Mouse DNA sequence from clone RP23-243K17 on chromosome 4, complete
             sequence
          Length = 179705

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 155   caagctgtgactctcagggt 174
             ||||||||||||||||||||
Sbjct: 53415 caagctgtgactctcagggt 53434
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>emb|Z84465.5|HS209H1 Human DNA sequence from clone RP1-209H1 on chromosome Xq25-26 Contains
             part of a novel gene, complete sequence
          Length = 73218

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 126   aaagaataccttattctata 145
             ||||||||||||||||||||
Sbjct: 39441 aaagaataccttattctata 39460
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>gb|AC166160.3| Mus musculus BAC clone RP24-86O19 from chromosome 7, complete sequence
          Length = 221792

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 62     atcacaccaaaccaagccaa 81
              ||||||||||||||||||||
Sbjct: 143246 atcacaccaaaccaagccaa 143227


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,724,802
Number of Sequences: 3902068
Number of extensions: 3724802
Number of successful extensions: 74272
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 74059
Number of HSP's gapped (non-prelim): 208
length of query: 399
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 377
effective length of database: 17,147,199,772
effective search space: 6464494314044
effective search space used: 6464494314044
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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