ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbastl26h04 |
|---|---|
| Clone Library Name | barley_pub |
>PKHA4_HUMAN (Q9H4M7) Pleckstrin homology domain-containing family A member 4| (Phosphoinositol 3-phosphate-binding protein 1) (PEPP-1) Length = 779 Score = 33.1 bits (74), Expect = 0.16 Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 10/82 (12%) Frame = +2 Query: 155 GAWSKH-----YISSTESESNILLVLITRLHLDSFRWHTFLQGHT-----NHLPCVPTGI 304 G+WS Y+ ++E +L L L ++ +WH + G + LP VP Sbjct: 651 GSWSSPRNTTPYLPTSEGHRERVLSLSQALATEASQWHRMMTGGNLDSQGDPLPGVPLPP 710 Query: 305 NGTAHRQLEQPRTPPLASYAPT 370 + ++ PR+PP+A+ T Sbjct: 711 SDPTRQETPPPRSPPVANSGST 732
>ATG26_CRYNE (Q5KK25) Sterol 3-beta-glucosyltransferase (EC 2.4.1.173)| (Autophagy-related protein 26) Length = 1585 Score = 30.4 bits (67), Expect = 1.1 Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 1/62 (1%) Frame = +2 Query: 218 ITRLHLDSFRWHTFLQGHTNHLPCVPTGINGTAHRQLEQPRTPPLASYAPTPTCPPLP-T 394 +T D W + G N G++ T ++EQ + P L +++PT PPL T Sbjct: 1188 MTYTMFDQVFWRA-ISGQVNRWRRNVLGLDATTFDKMEQHKVPFLYNFSPTVVPPPLDWT 1246 Query: 395 DW 400 +W Sbjct: 1247 EW 1248
>MLL3_MOUSE (Q8BRH4) Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog| (Histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3) (EC 2.1.1.43) Length = 4903 Score = 29.6 bits (65), Expect = 1.8 Identities = 29/91 (31%), Positives = 40/91 (43%), Gaps = 5/91 (5%) Frame = +2 Query: 134 QPPIYGPGAWSKHYISSTESESNILLVLITRLHLDSFRWHT-FLQGHTN--HLPCVP--T 298 QPP+ PGA S T S+ N +V H + HT + GHT+ +P +P Sbjct: 3283 QPPLV-PGA-----TSLTMSQPNFPMVPQQLQH----QQHTAVISGHTSPARMPSLPGWQ 3332 Query: 299 GINGTAHRQLEQPRTPPLASYAPTPTCPPLP 391 + +AH L PR P + TC P P Sbjct: 3333 SNSASAHLPLNPPRIQPPIAQLSLKTCTPAP 3363
>MLL3_HUMAN (Q8NEZ4) Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog| (Histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3) (EC 2.1.1.43) (Homologous to ALR protein) Length = 4911 Score = 29.6 bits (65), Expect = 1.8 Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 4/50 (8%) Frame = +2 Query: 254 TFLQGHTN--HLPCVP--TGINGTAHRQLEQPRTPPLASYAPTPTCPPLP 391 T + GHT+ +P +P + AH L PR P + P TC P P Sbjct: 3318 TVISGHTSPVRMPSLPGWQPNSAPAHLPLNPPRIQPPIAQLPIKTCTPAP 3367
>BCL9_HUMAN (O00512) B-cell lymphoma 9 protein (Bcl-9) (Legless homolog)| Length = 1426 Score = 29.6 bits (65), Expect = 1.8 Identities = 13/38 (34%), Positives = 18/38 (47%) Frame = +2 Query: 284 PCVPTGINGTAHRQLEQPRTPPLASYAPTPTCPPLPTD 397 P VP + + + TPP+ + AP P PP P D Sbjct: 238 PPVPANQDQNSSQNTRLQPTPPIPAPAPKPAAPPRPLD 275
>YCX7_CHLRE (P36495) 232.2 kDa protein (ORF1995) (ORF-S) (ORFA)| Length = 1995 Score = 29.6 bits (65), Expect = 1.8 Identities = 13/48 (27%), Positives = 24/48 (50%) Frame = +2 Query: 170 HYISSTESESNILLVLITRLHLDSFRWHTFLQGHTNHLPCVPTGINGT 313 H+++ E + + + H D+ RW+T++Q H + T I GT Sbjct: 857 HFLTKNEERALHIRRFLLSEHYDTLRWYTYMQ----HYKTMKTNIGGT 900
>CDKL5_HUMAN (O76039) Cyclin-dependent kinase-like 5 (EC 2.7.11.22)| (Serine/threonine-protein kinase 9) Length = 1030 Score = 29.3 bits (64), Expect = 2.3 Identities = 14/37 (37%), Positives = 16/37 (43%) Frame = +2 Query: 278 HLPCVPTGINGTAHRQLEQPRTPPLASYAPTPTCPPL 388 H PCVP N HR + P P+ T CP L Sbjct: 945 HTPCVP---NRALHRPISSPAPYPVLQVRGTSMCPTL 978
>RAG2_CHICK (P25022) V(D)J recombination-activating protein 2 (RAG-2)| Length = 528 Score = 29.3 bits (64), Expect = 2.3 Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 7/64 (10%) Frame = -2 Query: 176 CNVCSMLLDHIWVVVASTMYVSPAILLCFPGSSYLVRLR-TDMSSNGIL------LEYYC 18 C C++ ++ WV ST PA++LC GS + V + D+S + +L ++Y+C Sbjct: 421 CASCNIDIN-TWVPFYSTELNKPAMILCSSGSGHWVHAQCMDLSESMLLQLSEANVKYFC 479 Query: 17 SSRI 6 + + Sbjct: 480 NEHV 483
>XYNA_DICTH (Q12603) Beta-1,4-xylanase (EC 3.2.1.8) (Endo-1,4-beta-xylanase)| (1,4-beta-D-xylan xylanohydrolase) Length = 352 Score = 29.3 bits (64), Expect = 2.3 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 4/39 (10%) Frame = +2 Query: 14 YYSSTLVVFHSNSY----LF*VELNSWTPENKVKWLEIH 118 Y++ V H N Y L NS TPEN++KW IH Sbjct: 42 YFTIGAAVSHLNIYHYENLLKKHFNSLTPENQMKWEVIH 80
>WBS14_MOUSE (Q99MZ3) Williams-Beuren syndrome chromosome region 14 protein| homolog (Mlx interactor) (MLX-interacting protein-like) Length = 864 Score = 28.9 bits (63), Expect = 3.1 Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 8/83 (9%) Frame = +1 Query: 160 MEQTLHFIDRKRKQHTTSTNY--TPTFGFLPLAYFSSRPYKPSTLRPYRNQW------HG 315 ME + F + + Q TS+NY +P+FG + + FSS P P + H Sbjct: 297 MEISDFFTNYRPPQTPTSSNYIESPSFGPMADSLFSSGILAPEMPSPASSSSSSGMTPHS 356 Query: 316 PQTARTTKNTAAS*LCPNSHLSS 384 T +N+ + L PN LSS Sbjct: 357 GNTRLQARNSCSGPLDPNPFLSS 379
>E75BB_DROME (P13055) Ecdysone-induced protein 75B isoform B (E75-C)| Length = 1412 Score = 28.9 bits (63), Expect = 3.1 Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 5/49 (10%) Frame = +2 Query: 260 LQGHTNHLPCVPT-----GINGTAHRQLEQPRTPPLASYAPTPTCPPLP 391 L H+ P P G +Q +Q +TPPLA P P PP P Sbjct: 232 LHHHSRSAPVSPVIARRGGAAAYMDQQYQQRQTPPLAPPPPPPPPPPPP 280
>PROML_DROME (P82295) Prominin-like protein| Length = 1013 Score = 28.9 bits (63), Expect = 3.1 Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 5/35 (14%) Frame = +2 Query: 305 NGTAHRQLEQPRTPPL--ASYAPTPT---CPPLPT 394 +GT H QL QP PP+ Y PT PP PT Sbjct: 74 HGTTHEQLGQPHWPPVQYTVYRPTTNYTKAPPPPT 108
>SIR4_YEAST (P11978) Regulatory protein SIR4 (Silent information regulator 4)| Length = 1358 Score = 28.9 bits (63), Expect = 3.1 Identities = 12/28 (42%), Positives = 20/28 (71%) Frame = +2 Query: 269 HTNHLPCVPTGINGTAHRQLEQPRTPPL 352 HT+ P P+ + T+H+QL+QP++ PL Sbjct: 61 HTS--PHQPSDVKPTSHKQLQQPKSSPL 86
>GLI1_MOUSE (P47806) Zinc finger protein GLI1 (Glioma-associated oncogene| homolog) Length = 1111 Score = 28.5 bits (62), Expect = 4.0 Identities = 22/74 (29%), Positives = 33/74 (44%) Frame = +1 Query: 184 DRKRKQHTTSTNYTPTFGFLPLAYFSSRPYKPSTLRPYRNQWHGPQTARTTKNTAAS*LC 363 DR + Q+ T +N P LP + R PS+LR + HGP T ++ L Sbjct: 350 DRAKHQNRTHSNEKPYVCKLPGC--TKRYTDPSSLRKHVKTVHGPDAHVTKRHRGDGPLP 407 Query: 364 PNSHLSSIADRLER 405 LS++ + ER Sbjct: 408 RAQPLSTVEPKRER 421
>HXD9A_BRARE (Q9PWM6) Homeobox protein Hox-D9a (Hox-D9)| Length = 262 Score = 28.5 bits (62), Expect = 4.0 Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 7/84 (8%) Frame = +2 Query: 152 PGAWSKHYISSTESESNILLVLITRLHLDSFRW-HTFLQGHTNHLPCVPTGI------NG 310 P +WS + ST + S I + + HL R+ ++++ NH+ TG +G Sbjct: 61 PASWSSVHQPSTAAVSGIYHPYVHQTHLSDNRYVRSWIEPVANHISL--TGFHPNSRHSG 118 Query: 311 TAHRQLEQPRTPPLASYAPTPTCP 382 T L RT A TP+ P Sbjct: 119 TKTESLPPKRTESAAFETETPSVP 142
>BC11B_MOUSE (Q99PV8) B-cell lymphoma/leukemia 11B (B-cell CLL/lymphoma 11B)| (Radiation-induced tumor suppressor gene 1 protein) (mRit1) (COUP-TF-interacting protein 2) Length = 884 Score = 28.5 bits (62), Expect = 4.0 Identities = 14/44 (31%), Positives = 21/44 (47%) Frame = +2 Query: 260 LQGHTNHLPCVPTGINGTAHRQLEQPRTPPLASYAPTPTCPPLP 391 L G+++ P V G HR L + P + + TP PP+P Sbjct: 370 LAGNSSTPPPVSPGRGNPMHRLLNPFQPSPKSPFLSTPPLPPMP 413
>BC11B_HUMAN (Q9C0K0) B-cell lymphoma/leukemia 11B (B-cell CLL/lymphoma 11B)| (Radiation-induced tumor suppressor gene 1 protein) (hRit1) (COUP-TF-interacting protein 2) Length = 894 Score = 28.5 bits (62), Expect = 4.0 Identities = 14/44 (31%), Positives = 21/44 (47%) Frame = +2 Query: 260 LQGHTNHLPCVPTGINGTAHRQLEQPRTPPLASYAPTPTCPPLP 391 L G+++ P V G HR L + P + + TP PP+P Sbjct: 370 LAGNSSTPPPVSPGRGNPMHRLLNPFQPSPKSPFLSTPPLPPMP 413
>RCOR2_XENLA (Q6NRZ0) REST corepressor 2| Length = 503 Score = 28.5 bits (62), Expect = 4.0 Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 10/45 (22%) Frame = +2 Query: 281 LPCVPTGINGTAHRQ--------LEQPRTPPLASYAP--TPTCPP 385 +PC PT HRQ L QPR PPL AP +P PP Sbjct: 452 IPCAPT-----LHRQPPPLQPGRLLQPRPPPLVRPAPRQSPRAPP 491
>SMG1_CAEEL (O01510) Serine/threonine-protein kinase smg-1 (EC 2.7.11.1)| (Suppressor with morphogenetic effect on genitalia protein 1) Length = 2322 Score = 28.1 bits (61), Expect = 5.2 Identities = 16/76 (21%), Positives = 36/76 (47%) Frame = +1 Query: 82 DPGKQSKMAGDTYIVDATTTHIWSRSMEQTLHFIDRKRKQHTTSTNYTPTFGFLPLAYFS 261 D K++K T I ++ + + R T++ + ++R+Q T ++ F+ + F Sbjct: 638 DKTKKAKWKEATTIWESGDCNTYIRQSMSTVYQMSQERQQKTITSTSFGAEEFIIITNFL 697 Query: 262 SRPYKPSTLRPYRNQW 309 + P+T + +N W Sbjct: 698 LKQATPTTFKKGQNSW 713
>PER1_MOUSE (O35973) Period circadian protein 1 (Circadian pacemaker protein| Rigui) (mPER) (M-Rigui) Length = 1291 Score = 28.1 bits (61), Expect = 5.2 Identities = 14/36 (38%), Positives = 21/36 (58%) Frame = +2 Query: 284 PCVPTGINGTAHRQLEQPRTPPLASYAPTPTCPPLP 391 P P+ G + +E P TP AS++P+P+ PP P Sbjct: 928 PTPPSYPYGVSQAPVEGPPTP--ASHSPSPSLPPPP 961
>NR1D1_RAT (Q63503) Orphan nuclear receptor NR1D1 (V-erbA-related protein| EAR-1) (Rev-erbA-alpha) Length = 508 Score = 28.1 bits (61), Expect = 5.2 Identities = 19/69 (27%), Positives = 29/69 (42%) Frame = +2 Query: 137 PPIYGPGAWSKHYISSTESESNILLVLITRLHLDSFRWHTFLQGHTNHLPCVPTGINGTA 316 PP P W ST +++N+L L+ R QG +++ P P +G A Sbjct: 217 PPATTPQCWESQGCPSTPNDNNLLAAQRHNEALNGLR-----QGPSSYPPTWP---SGPA 268 Query: 317 HRQLEQPRT 343 H QP + Sbjct: 269 HHSCHQPNS 277
>RBM12_MOUSE (Q8R4X3) RNA-binding protein 12 (RNA-binding motif protein 12)| (SH3/WW domain anchor protein in the nucleus) (SWAN) Length = 1002 Score = 28.1 bits (61), Expect = 5.2 Identities = 11/20 (55%), Positives = 12/20 (60%) Frame = +2 Query: 335 PRTPPLASYAPTPTCPPLPT 394 P PPL S P P PP+PT Sbjct: 197 PSLPPLPSIPPIPVPPPVPT 216
>YO62_CAEEL (P34601) Hypothetical protein ZK1098.2| Length = 626 Score = 28.1 bits (61), Expect = 5.2 Identities = 15/40 (37%), Positives = 20/40 (50%) Frame = -2 Query: 122 MYVSPAILLCFPGSSYLVRLRTDMSSNGILLEYYCSSRIL 3 +YV ILLCF + L R +N L Y+C+ IL Sbjct: 352 IYVLSLILLCFQLTEQLSRTPAQSRANEWLASYHCARDIL 391
>YMD5_CAEEL (P34459) Hypothetical protein F54H12.5| Length = 880 Score = 27.7 bits (60), Expect = 6.8 Identities = 21/78 (26%), Positives = 32/78 (41%), Gaps = 4/78 (5%) Frame = +2 Query: 164 SKHYISSTESESNILLVLITRL----HLDSFRWHTFLQGHTNHLPCVPTGINGTAHRQLE 331 S SST+S +N +L + + S+ ++ T P +P N T R Sbjct: 377 SSSITSSTDSSTNSMLPETSTIDPGSQSSSYSGNSLTASSTTSDPSIP---NPTRKRITR 433 Query: 332 QPRTPPLASYAPTPTCPP 385 QP PP + P+ PP Sbjct: 434 QPNYPPWQPHQPSNPNPP 451
>DIAP3_HUMAN (Q9NSV4) Protein diaphanous homolog 3 (Diaphanous-related formin-3)| (DRF3) Length = 1110 Score = 27.7 bits (60), Expect = 6.8 Identities = 15/38 (39%), Positives = 18/38 (47%) Frame = +2 Query: 278 HLPCVPTGINGTAHRQLEQPRTPPLASYAPTPTCPPLP 391 ++P P+ GT H L P PPL S P PP P Sbjct: 559 NIPLPPSKEGGTGHSALPPP--PPLPSGGGVPPPPPPP 594
>GLI1_HUMAN (P08151) Zinc finger protein GLI1 (Glioma-associated oncogene)| (Oncogene GLI) Length = 1106 Score = 27.7 bits (60), Expect = 6.8 Identities = 21/74 (28%), Positives = 33/74 (44%) Frame = +1 Query: 184 DRKRKQHTTSTNYTPTFGFLPLAYFSSRPYKPSTLRPYRNQWHGPQTARTTKNTAAS*LC 363 DR + Q+ T +N P LP + R PS+LR + HGP T ++ L Sbjct: 347 DRAKHQNRTHSNEKPYVCKLPGC--TKRYTDPSSLRKHVKTVHGPDAHVTKRHRGDGPLP 404 Query: 364 PNSHLSSIADRLER 405 +S++ + ER Sbjct: 405 RAPSISTVEPKRER 418
>ENV_MLVRK (P31794) Env polyprotein precursor (Coat polyprotein) [Contains:| Coat protein GP76; Spike protein p15E; R protein] Length = 665 Score = 27.7 bits (60), Expect = 6.8 Identities = 32/129 (24%), Positives = 46/129 (35%), Gaps = 24/129 (18%) Frame = +2 Query: 77 SWTPENKVKWLEI--HT*SMQQPPIYGPGAWSKHYISSTESESNILLVLITRLHLDSFRW 250 SW P + ++ + + S Q P+ W N L + T L + W Sbjct: 184 SWKPSSSWDYITVSNNLTSGQATPVCKNNTWC-----------NSLTIRFTSLGKQATSW 232 Query: 251 HT--------FLQGH------------TNHLPCVPTGINGTA--HRQLEQPRTPPLASYA 364 T ++ GH T+ P VP G N R QPR+PP ++ Sbjct: 233 VTGHWWGLRLYVSGHDPGLIFGIRLKITDSGPRVPIGPNPVLSDQRPPSQPRSPPHSNST 292 Query: 365 PTPTCPPLP 391 PT T LP Sbjct: 293 PTETPLTLP 301
>ENV_MLVRD (P11268) Env polyprotein precursor (Coat polyprotein) [Contains:| Coat protein GP76; Spike protein p15E; R protein] Length = 665 Score = 27.7 bits (60), Expect = 6.8 Identities = 32/129 (24%), Positives = 46/129 (35%), Gaps = 24/129 (18%) Frame = +2 Query: 77 SWTPENKVKWLEI--HT*SMQQPPIYGPGAWSKHYISSTESESNILLVLITRLHLDSFRW 250 SW P + ++ + + S Q P+ W N L + T L + W Sbjct: 184 SWKPSSSWDYITVSNNLTSGQATPVCKNNTWC-----------NSLTIRFTSLGKQATSW 232 Query: 251 HT--------FLQGH------------TNHLPCVPTGINGTA--HRQLEQPRTPPLASYA 364 T ++ GH T+ P VP G N R QPR+PP ++ Sbjct: 233 VTGHWWGLRLYVSGHDPGLIFGIRLKITDSGPRVPIGPNPVLSDQRPPSQPRSPPHSNST 292 Query: 365 PTPTCPPLP 391 PT T LP Sbjct: 293 PTETPLTLP 301
>GAG_HTL1M (P14077) Gag polyprotein [Contains: Major core protein p19; Major| core protein p24; Nucleic acid-binding protein p15] Length = 428 Score = 27.7 bits (60), Expect = 6.8 Identities = 16/39 (41%), Positives = 16/39 (41%) Frame = +2 Query: 284 PCVPTGINGTAHRQLEQPRTPPLASYAPTPTCPPLPTDW 400 PC G G R QPR PP P P C PT W Sbjct: 355 PCFRCGKAGHWSRDCTQPRPPP----GPCPLCQD-PTHW 388
>GAG_HTL1C (P14076) Gag polyprotein [Contains: Major core protein p19; Major| core protein p24; Nucleic acid-binding protein p15] Length = 429 Score = 27.7 bits (60), Expect = 6.8 Identities = 16/39 (41%), Positives = 16/39 (41%) Frame = +2 Query: 284 PCVPTGINGTAHRQLEQPRTPPLASYAPTPTCPPLPTDW 400 PC G G R QPR PP P P C PT W Sbjct: 356 PCFRCGKAGHWSRDCTQPRPPP----GPCPLCQD-PTHW 389
>GAG_HTL1A (P03345) Gag polyprotein [Contains: Major core protein p19; Major| core protein p24; Nucleic acid-binding protein p15] Length = 429 Score = 27.7 bits (60), Expect = 6.8 Identities = 16/39 (41%), Positives = 16/39 (41%) Frame = +2 Query: 284 PCVPTGINGTAHRQLEQPRTPPLASYAPTPTCPPLPTDW 400 PC G G R QPR PP P P C PT W Sbjct: 356 PCFRCGKAGHWSRDCTQPRPPP----GPCPLCQD-PTHW 389
>M3K11_HUMAN (Q16584) Mitogen-activated protein kinase kinase kinase 11 (EC| 2.7.11.25) (Mixed lineage kinase 3) (Src-homology 3 domain-containing proline-rich kinase) Length = 847 Score = 27.7 bits (60), Expect = 6.8 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = +2 Query: 308 GTAHRQLEQPRTPPLASYAPTPTCPP 385 G + E P TPP + AP PT PP Sbjct: 666 GPGRERGESPTTPPTPTPAPCPTEPP 691
>BAT2_MOUSE (Q7TSC1) Large proline-rich protein BAT2 (HLA-B-associated| transcript 2) Length = 2158 Score = 27.7 bits (60), Expect = 6.8 Identities = 12/37 (32%), Positives = 18/37 (48%) Frame = +2 Query: 284 PCVPTGINGTAHRQLEQPRTPPLASYAPTPTCPPLPT 394 P +P T ++ E+P P AP+P P+PT Sbjct: 530 PALPPTPTPTPEKEPEEPAQAPPVQAAPSPGVAPVPT 566
>REPA2_BUCAP (O85062) Probable replication-associated protein repA2| Length = 250 Score = 27.3 bits (59), Expect = 8.9 Identities = 15/47 (31%), Positives = 24/47 (51%) Frame = +1 Query: 166 QTLHFIDRKRKQHTTSTNYTPTFGFLPLAYFSSRPYKPSTLRPYRNQ 306 + + FI KRK+ +S+NY P FL +F ST+ Y ++ Sbjct: 127 EPMGFIKCKRKKTQSSSNYIPKKIFLTSNFFMLFHISQSTINQYLSE 173
>SPEG_MOUSE (Q62407) Striated muscle-specific serine/threonine protein kinase (EC| 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1) Length = 3262 Score = 27.3 bits (59), Expect = 8.9 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%) Frame = +2 Query: 308 GTAHRQLEQPRTPP-LASYAPTPTCPPLP 391 G + +++ RTPP LA A PT PP P Sbjct: 2292 GVSEKRVPSARTPPVLAEKARVPTVPPRP 2320
>LCP2_MOUSE (Q60787) Lymphocyte cytosolic protein 2 (SH2 domain-containing| leucocyte protein of 76 kDa) (SLP-76 tyrosine phosphoprotein) (SLP76) Length = 533 Score = 27.3 bits (59), Expect = 8.9 Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 6/40 (15%) Frame = +2 Query: 293 PTGINGTAHRQLEQPRT------PPLASYAPTPTCPPLPT 394 P + T +++P T PP+ P P PPLPT Sbjct: 163 PNSFHNTNSMYIDRPPTGKVSQQPPVPPLRPKPALPPLPT 202
>K1H8_HUMAN (O76015) Keratin, type I cuticular Ha8 (Hair keratin, type I Ha8)| Length = 456 Score = 27.3 bits (59), Expect = 8.9 Identities = 21/70 (30%), Positives = 27/70 (38%), Gaps = 3/70 (4%) Frame = +2 Query: 194 ESNILLVLITRLHLDSFRWHTFLQGHTNHLPCVPTGINGTAHRQLEQPRTPP---LASYA 364 E +LL + TRL + + L+ LPC P TPP A A Sbjct: 386 EYQVLLDVKTRLENEIATYRNLLESEDCKLPCNPCS-------------TPPSCVTAPCA 432 Query: 365 PTPTCPPLPT 394 P P+C P T Sbjct: 433 PRPSCGPCTT 442
>CCNT1_PANTR (Q8HXN7) Cyclin-T1 (Cyclin-T) (CycT1)| Length = 725 Score = 27.3 bits (59), Expect = 8.9 Identities = 16/45 (35%), Positives = 26/45 (57%) Frame = +2 Query: 257 FLQGHTNHLPCVPTGINGTAHRQLEQPRTPPLASYAPTPTCPPLP 391 F++ ++++L GI+ + ++PR PPL S P P PPLP Sbjct: 682 FVRPYSDYLNPRAGGISSRSGNT-DKPRPPPLPS-EPPPPLPPLP 724
>BAT2_RAT (Q6MG48) Large proline-rich protein BAT2 (HLA-B-associated| transcript 2) Length = 2161 Score = 27.3 bits (59), Expect = 8.9 Identities = 13/37 (35%), Positives = 16/37 (43%) Frame = +2 Query: 284 PCVPTGINGTAHRQLEQPRTPPLASYAPTPTCPPLPT 394 P +P T + E+P P APT PP PT Sbjct: 531 PALPPTPTPTPEKDPEEPAHAPPVQSAPTQAGPPAPT 567
>LARG2_MOUSE (Q5XPT3) Glycosyltransferase-like protein LARGE2 (EC 2.4.-.-)| (Glycosyltransferase-like 1B) Length = 690 Score = 27.3 bits (59), Expect = 8.9 Identities = 15/51 (29%), Positives = 26/51 (50%) Frame = +2 Query: 125 SMQQPPIYGPGAWSKHYISSTESESNILLVLITRLHLDSFRWHTFLQGHTN 277 S ++ + P + HY S + LL L+ L +FR+H + QGH++ Sbjct: 516 SRRKTALVVPAFETLHYRFSFPNSKAELLTLLDAGSLHTFRYHEWPQGHSS 566
>GCNL2_HUMAN (Q92830) General control of amino acid synthesis protein 5-like 2| (EC 2.3.1.48) (Histone acetyltransferase GCN5) (hsGCN5) (STAF97) Length = 837 Score = 27.3 bits (59), Expect = 8.9 Identities = 12/34 (35%), Positives = 16/34 (47%) Frame = +2 Query: 293 PTGINGTAHRQLEQPRTPPLASYAPTPTCPPLPT 394 PT R L+ P P + AP+P P+PT Sbjct: 8 PTPAPAAQPRPLQSPAPAPTPTPAPSPASAPIPT 41
>SI1L1_MOUSE (Q8C0T5) Signal-induced proliferation-associated 1-like protein 1| Length = 1782 Score = 27.3 bits (59), Expect = 8.9 Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 1/44 (2%) Frame = -1 Query: 315 AVPLIP-VGTQGRWFVWP*RKVCQRKESKCRRVISTSSMLLSLS 187 + P +P +G + R WP RK ++ S+ + I TSS L SLS Sbjct: 67 STPGVPKMGVRARIADWPPRKENVKESSRSSQEIETSSCLESLS 110
>K1949_PIG (Q767M0) Protein KIAA1949 homolog| Length = 618 Score = 27.3 bits (59), Expect = 8.9 Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 2/39 (5%) Frame = +2 Query: 281 LPCVPTGINGTAHRQLE--QPRTPPLASYAPTPTCPPLP 391 LP G G+ ++ E + R PP A +P P PP P Sbjct: 408 LPPEDAGTGGSRQQEEEAGELRPPPAAPLSPPPPAPPAP 446
>HAP2_HAEIN (P45387) Adhesion and penetration protein precursor (EC 3.4.21.-)| Length = 1394 Score = 27.3 bits (59), Expect = 8.9 Identities = 12/42 (28%), Positives = 20/42 (47%) Frame = +1 Query: 271 YKPSTLRPYRNQWHGPQTARTTKNTAAS*LCPNSHLSSIADR 396 YK L PY + +H P+ + A + N + S+ +DR Sbjct: 129 YKKDNLHPYEDDYHNPRLHKFVTEAAPIDMTSNMNGSTYSDR 170
>CCNT1_HUMAN (O60563) Cyclin-T1 (Cyclin-T) (CycT1)| Length = 726 Score = 27.3 bits (59), Expect = 8.9 Identities = 16/45 (35%), Positives = 26/45 (57%) Frame = +2 Query: 257 FLQGHTNHLPCVPTGINGTAHRQLEQPRTPPLASYAPTPTCPPLP 391 F++ ++++L GI+ + ++PR PPL S P P PPLP Sbjct: 683 FVRPYSDYLNPRSGGISSRSGNT-DKPRPPPLPS-EPPPPLPPLP 725
>RBM12_MACMU (Q8SQ27) RNA-binding protein 12 (RNA-binding motif protein 12)| (SH3/WW domain anchor protein in the nucleus) (SWAN) Length = 932 Score = 27.3 bits (59), Expect = 8.9 Identities = 10/20 (50%), Positives = 12/20 (60%) Frame = +2 Query: 335 PRTPPLASYAPTPTCPPLPT 394 P PP+ S P P PP+PT Sbjct: 197 PSLPPMPSIPPIPVPPPVPT 216
>RBM12_HUMAN (Q9NTZ6) RNA-binding protein 12 (RNA-binding motif protein 12)| (SH3/WW domain anchor protein in the nucleus) (SWAN) Length = 932 Score = 27.3 bits (59), Expect = 8.9 Identities = 10/20 (50%), Positives = 12/20 (60%) Frame = +2 Query: 335 PRTPPLASYAPTPTCPPLPT 394 P PP+ S P P PP+PT Sbjct: 197 PSLPPMPSIPPIPVPPPVPT 216
>SI1L1_RAT (O35412) Signal-induced proliferation-associated 1-like protein 1| (SPA-1-like protein p1294) Length = 1822 Score = 27.3 bits (59), Expect = 8.9 Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 1/44 (2%) Frame = -1 Query: 315 AVPLIP-VGTQGRWFVWP*RKVCQRKESKCRRVISTSSMLLSLS 187 + P +P +G + R WP RK ++ S+ + I TSS L SLS Sbjct: 67 STPGVPKMGVRARIADWPPRKENVKESSRSSQEIETSSCLESLS 110
>DSCL1_HUMAN (Q8TD84) Down syndrome cell adhesion molecule-like protein 1| precursor (Down syndrome cell adhesion molecule 2) Length = 2053 Score = 27.3 bits (59), Expect = 8.9 Identities = 22/71 (30%), Positives = 28/71 (39%), Gaps = 6/71 (8%) Frame = +2 Query: 164 SKHYISSTESESNILLVLITR------LHLDSFRWHTFLQGHTNHLPCVPTGINGTAHRQ 325 +KH S +SN + +T LD F GHT LPC +G A R Sbjct: 200 TKHKYSGETRQSNGARLSVTDPAESIPTILDGFHSQEVWAGHTVELPCTASGYPIPAIRW 259 Query: 326 LEQPRTPPLAS 358 L+ R P S Sbjct: 260 LKDGRPLPADS 270 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 62,731,376 Number of Sequences: 219361 Number of extensions: 1304065 Number of successful extensions: 4533 Number of sequences better than 10.0: 49 Number of HSP's better than 10.0 without gapping: 3916 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4492 length of database: 80,573,946 effective HSP length: 110 effective length of database: 56,444,236 effective search space used: 1354661664 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
