Clone Name | rbastl26h03 |
---|---|
Clone Library Name | barley_pub |
>SYA_ARATH (P36428) Alanyl-tRNA synthetase, mitochondrial precursor (EC 6.1.1.7)| (Alanine--tRNA ligase) (AlaRS) Length = 1003 Score = 43.1 bits (100), Expect = 3e-04 Identities = 19/32 (59%), Positives = 27/32 (84%) Frame = -1 Query: 442 GKNGLAQGQGSDASRVKEAMELATQIASMKLS 347 GK GLA GQG+DAS+V+ A+++A+ ASMKL+ Sbjct: 972 GKGGLASGQGTDASQVQAALDMASSFASMKLN 1003
>RGA7_SCHPO (O94466) Probable Rho-GTPase-activating protein 7| Length = 695 Score = 31.2 bits (69), Expect = 1.2 Identities = 20/63 (31%), Positives = 27/63 (42%) Frame = +1 Query: 163 PSAIPCSSTICPQLQSRFTSRLLSSLPGIGNDASTLLPKQTLDTSGSKSTLIKRPDESQQ 342 PS P S P + TS ++ ASTL P DT+GS S+ P S Sbjct: 374 PSTFPNPSVASPAFPNSSTSNPSTAPASASPLASTLKPSTANDTNGSSSSSSSNPRTSSP 433 Query: 343 ISS 351 ++S Sbjct: 434 LAS 436
>HYIN1_AGRVI (Q04557) Indoleacetamide hydrolase (EC 3.5.1.-) (IAH)| (Indole-3-acetamide hydrolase) Length = 462 Score = 30.4 bits (67), Expect = 2.0 Identities = 15/30 (50%), Positives = 23/30 (76%) Frame = +3 Query: 327 RRVSTNQLSFIEAICVASSMASLTREASLP 416 RR++TNQ++F+EA ++A LTR+ SLP Sbjct: 265 RRLATNQMTFVEA--DIPNVAELTRKVSLP 292
>SYA_THETN (Q8RAH4) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 878 Score = 30.0 bits (66), Expect = 2.7 Identities = 14/31 (45%), Positives = 21/31 (67%) Frame = -1 Query: 442 GKNGLAQGQGSDASRVKEAMELATQIASMKL 350 G+ +AQG G + S+VKEA+E A +I +L Sbjct: 846 GRAEMAQGTGKNISKVKEALEKAIEIVKGQL 876
>KHSE_BACSU (P04948) Homoserine kinase (EC 2.7.1.39) (HSK) (HK)| Length = 309 Score = 28.9 bits (63), Expect = 5.9 Identities = 13/28 (46%), Positives = 20/28 (71%) Frame = -1 Query: 430 LAQGQGSDASRVKEAMELATQIASMKLS 347 LA+G GS A+ + A+ELA ++ +KLS Sbjct: 92 LARGLGSSAAAIVAAIELADELCGLKLS 119
>ICP4_GAHVG (Q02362) Trans-acting transcriptional activator protein ICP4| (Immediate-early protein IE175) Length = 1415 Score = 28.9 bits (63), Expect = 5.9 Identities = 15/32 (46%), Positives = 16/32 (50%) Frame = -3 Query: 437 EWPRPGPGK*CFSGQGGHGACYTDSFNEAELI 342 E P P PG+ F G GGH TDS E I Sbjct: 288 EVPLPPPGRCWFGGLGGHRQALTDSPEIVEAI 319
>PA2I_VIPAP (Q8JFG1) Phospholipase A2 inhibitor precursor (Vaspin A chain)| Length = 138 Score = 28.5 bits (62), Expect = 7.7 Identities = 13/40 (32%), Positives = 22/40 (55%) Frame = -3 Query: 380 ACYTDSFNEAELIC*DSSGLLISVLLEPEVSSVCLGSRVD 261 A YT SF +++C D+ L +V +++CLG V+ Sbjct: 78 ATYTYSFENGDIVCGDNDLCLRAVCECDRAAAICLGENVN 117
>PA21B_VIPAZ (Q10754) Phospholipase A2, A chain precursor (Phospholipase A2| inhibitor) (PLA2-I complex A chain) (Vaspin A chain) Length = 138 Score = 28.5 bits (62), Expect = 7.7 Identities = 13/40 (32%), Positives = 22/40 (55%) Frame = -3 Query: 380 ACYTDSFNEAELIC*DSSGLLISVLLEPEVSSVCLGSRVD 261 A YT SF +++C D+ L +V +++CLG V+ Sbjct: 78 ATYTYSFENGDIVCGDNDLCLRAVCECDRAAAICLGENVN 117
>PA2I_VIPAE (P04084) Phospholipase A2 inhibitor (Vipoxin toxic component)| (Vipoxin A chain) (Inh) Length = 122 Score = 28.5 bits (62), Expect = 7.7 Identities = 13/40 (32%), Positives = 22/40 (55%) Frame = -3 Query: 380 ACYTDSFNEAELIC*DSSGLLISVLLEPEVSSVCLGSRVD 261 A YT SF +++C D+ L +V +++CLG V+ Sbjct: 62 ATYTYSFENGDIVCGDNDLCLRAVCECDRAAAICLGENVN 101 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 60,550,781 Number of Sequences: 219361 Number of extensions: 1064414 Number of successful extensions: 2959 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 2900 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2950 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2628831825 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)