ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl26g12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1SPR1_YEAST (P32603) Sporulation-specific glucan 1,3-beta-glucosi... 28 5.1
2SPR1_SACBA (Q876J2) Sporulation-specific glucan 1,3-beta-glucosi... 28 5.1
3MRP_STRSU (P32653) Muramidase-released protein precursor (136 kD... 28 8.7
4PSD3_HUMAN (O43242) 26S proteasome non-ATPase regulatory subunit... 28 8.7
5PSD3_MOUSE (P14685) 26S proteasome non-ATPase regulatory subunit... 28 8.7
6TENS1_HUMAN (Q9HBL0) Tensin-1 28 8.7

>SPR1_YEAST (P32603) Sporulation-specific glucan 1,3-beta-glucosidase precursor|
           (EC 3.2.1.58) (Exo-1,3-beta-glucanase)
          Length = 445

 Score = 28.5 bits (62), Expect = 5.1
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -3

Query: 130 LSSEEMTQEWKKEASGCILWCMRTLNVILWDA*NVVQ 20
           L + EMT  W       I+WC +T N I WD   ++Q
Sbjct: 398 LDAFEMTGGW-------IMWCYKTENSIEWDVEKLIQ 427



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>SPR1_SACBA (Q876J2) Sporulation-specific glucan 1,3-beta-glucosidase precursor|
           (EC 3.2.1.58) (Exo-1,3-beta-glucanase)
          Length = 445

 Score = 28.5 bits (62), Expect = 5.1
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -3

Query: 130 LSSEEMTQEWKKEASGCILWCMRTLNVILWDA*NVVQ 20
           L + EMT  W       I+WC +T N I WD   ++Q
Sbjct: 398 LDAFEMTGGW-------IMWCYKTENSIEWDVEKLIQ 427



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>MRP_STRSU (P32653) Muramidase-released protein precursor (136 kDa surface|
           protein)
          Length = 1256

 Score = 27.7 bits (60), Expect = 8.7
 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
 Frame = +3

Query: 45  KITFRVLIHHKMQPEAS--FFHSCVISSLDSNLATTYDAPNASVNCKGS 185
           + T  VL  + ++P  S  F H   +++ +SN+  TYD   AS N  G+
Sbjct: 292 RTTGDVLEKYTIEPGESVTFSHPTKVNANNSNITVTYDTSLASANTPGA 340



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>PSD3_HUMAN (O43242) 26S proteasome non-ATPase regulatory subunit 3 (26S|
           proteasome regulatory subunit S3) (Proteasome subunit
           p58)
          Length = 534

 Score = 27.7 bits (60), Expect = 8.7
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = +2

Query: 53  IQSSHTPQNATRSFLLPFL 109
           +Q   T  NATR FLLPFL
Sbjct: 117 VQGFFTSNNATRDFLLPFL 135



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>PSD3_MOUSE (P14685) 26S proteasome non-ATPase regulatory subunit 3 (26S|
           proteasome regulatory subunit S3) (Proteasome subunit
           p58) (Transplantation antigen P91A) (Tum-P91A antigen)
          Length = 530

 Score = 27.7 bits (60), Expect = 8.7
 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 11/45 (24%)
 Frame = +2

Query: 8   PQLVLDNISCIPQNNIQSSH-----------TPQNATRSFLLPFL 109
           P+ VL  +  +P  + + +H           T  NATR FLLPFL
Sbjct: 87  PRFVLRALRMLPSTSRRLNHYVLYKAVHGFFTSNNATRDFLLPFL 131



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>TENS1_HUMAN (Q9HBL0) Tensin-1|
          Length = 1735

 Score = 27.7 bits (60), Expect = 8.7
 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = +3

Query: 63   LIHHKMQ-PEASFFHSCVISSLDSNLATTYDAPN 161
            L HH+M  P  + FH   +SS  S+ ATT  +P+
Sbjct: 1212 LSHHQMMGPPGTGFHGSTVSSPQSSAATTPGSPS 1245


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,467,102
Number of Sequences: 219361
Number of extensions: 496317
Number of successful extensions: 2055
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1879
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2055
length of database: 80,573,946
effective HSP length: 39
effective length of database: 72,018,867
effective search space used: 1728452808
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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