ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl26g10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1IL22_MOUSE (Q9JJY9) Interleukin-22 precursor (IL-22) (IL-10-rela... 30 1.8
2IL22B_MOUSE (Q9JJY8) Interleukin-22b precursor (IL-22b) (IL-10-r... 29 2.3
3CLH_YEAST (P22137) Clathrin heavy chain 28 6.8
4PFP_AMYMD (Q9AGC0) Pyrophosphate--fructose 6-phosphate 1-phospho... 28 6.8
5GUN_BACS1 (P06564) Endoglucanase precursor (EC 3.2.1.4) (Endo-1,... 27 8.9

>IL22_MOUSE (Q9JJY9) Interleukin-22 precursor (IL-22) (IL-10-related|
           T-cell-derived-inducible factor) (IL-TIF) (IL-TIF alpha)
           (Interleukin-22a) (IL-22a)
          Length = 179

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = +3

Query: 177 SSSILLVVLWAVENSSYPVASWCKVE 254
           +S +LL+ LWA E ++ PV + CK+E
Sbjct: 18  ASCLLLIALWAQEANALPVNTRCKLE 43



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>IL22B_MOUSE (Q9JJY8) Interleukin-22b precursor (IL-22b) (IL-10-related|
           T-cell-derived-inducible factor beta) (IL-TIFb) (IL-TIF
           beta)
          Length = 179

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 11/26 (42%), Positives = 19/26 (73%)
 Frame = +3

Query: 177 SSSILLVVLWAVENSSYPVASWCKVE 254
           +S +LL+ LWA E ++ P+ + CK+E
Sbjct: 18  ASCLLLIALWAQEANALPINTRCKLE 43



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>CLH_YEAST (P22137) Clathrin heavy chain|
          Length = 1653

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = -1

Query: 152 SHKTIMSSQCLENYTLCLGIEFCMVFNNRMSANSPWLVGVY 30
           S K  +  + LENYT    I+ C+V  N +  +  WLVG +
Sbjct: 623 SEKAGLYQRALENYTDIKDIKRCVVHTNALPID--WLVGYF 661



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>PFP_AMYMD (Q9AGC0) Pyrophosphate--fructose 6-phosphate 1-phosphotransferase|
           (EC 2.7.1.90) (6-phosphofructokinase, pyrophosphate
           dependent) (Pyrophosphate-dependent
           6-phosphofructose-1-kinase) (PPi-dependent
           phosphofructokinase) (PPi-PFK)
          Length = 341

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 12/38 (31%), Positives = 24/38 (63%)
 Frame = +3

Query: 81  HTKFYS*TQSVIFKTLGRHDGFMGMHSNPSYNSSSILL 194
           HT   S  ++++ + +GRH G++ +HS  +  +S IL+
Sbjct: 154 HTTAESHHRALVVEVMGRHAGWIALHSGLAGGASVILV 191



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>GUN_BACS1 (P06564) Endoglucanase precursor (EC 3.2.1.4)|
           (Endo-1,4-beta-glucanase) (Alkaline cellulase)
          Length = 800

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 15/51 (29%), Positives = 23/51 (45%)
 Frame = +3

Query: 126 LGRHDGFMGMHSNPSYNSSSILLVVLWAVENSSYPVASWCKVEYMHASRSP 278
           L  + G  G  SNP    S ++  +  A+EN  Y +  W    ++HA   P
Sbjct: 112 LAMYVGENGYASNPELIKSRVIKGIDLAIENDMYVIVDW----HVHAPGDP 158


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,132,383
Number of Sequences: 219361
Number of extensions: 1359179
Number of successful extensions: 2872
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2872
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 1359926328
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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