Clone Information

BLAST Search Result

Clone Name	rbastl26g09
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	LRP1B_MOUSE (Q9JI18) Low-density lipoprotein receptor-related pr...	32	0.47
2	ZSWM2_MOUSE (Q9D9X6) Zinc finger SWIM domain-containing protein 2	31	0.81
3	LRP_CAEEL (Q04833) Low-density lipoprotein receptor-related prot...	30	1.1
4	Y875_RICPR (Q9ZC92) Hypothetical protein RP875	30	1.1
5	ADA22_XENLA (O42596) ADAM 22 precursor (A disintegrin and metall...	30	1.4
6	LRP12_MACFA (Q9BE74) Low-density lipoprotein receptor-related pr...	30	1.8
7	LRP1B_HUMAN (Q9NZR2) Low-density lipoprotein receptor-related pr...	30	1.8
8	LRP12_HUMAN (Q9Y561) Low-density lipoprotein receptor-related pr...	30	1.8
9	LRP2_RAT (P98158) Low-density lipoprotein receptor-related prote...	30	1.8
10	SORL_RABIT (Q95209) Sortilin-related receptor precursor (Sorting...	29	2.3
11	MT_CARMA (P55948) Metallothionein (MT)	29	2.3
12	SORL_HUMAN (Q92673) Sortilin-related receptor precursor (Sorting...	29	2.3
13	PSTB_MYCGA (Q7NC40) Phosphate import ATP-binding protein pstB (E...	29	2.3
14	LRP2_HUMAN (P98164) Low-density lipoprotein receptor-related pro...	29	3.1
15	YJJW_ECOLI (P39409) Hypothetical protein yjjW	29	3.1
16	LRP1_HUMAN (Q07954) Low-density lipoprotein receptor-related pro...	29	3.1
17	LRP1_CHICK (P98157) Low-density lipoprotein receptor-related pro...	29	3.1
18	DGKE_HUMAN (P52429) Diacylglycerol kinase epsilon (EC 2.7.1.107)...	28	4.0
19	TMPS7_HUMAN (Q7RTY8) Transmembrane protease, serine 7 precursor ...	28	4.0
20	YCNL_BACSU (P94434) Hypothetical protein ycnL	28	4.0
21	ADA21_HUMAN (Q9UKJ8) ADAM 21 precursor (EC 3.4.24.-) (A disinteg...	28	4.0
22	ADA29_HUMAN (Q9UKF5) ADAM 29 precursor (A disintegrin and metall...	28	5.2
23	TMPS7_MOUSE (Q8BIK6) Transmembrane protease, serine 7 precursor ...	28	5.2
24	MT_POTPO (P55952) Metallothionein (MT)	28	5.2
25	Y065_WIGBR (Q8D3D6) UPF0176 protein WIGBR0650	28	5.2
26	SSPP_STAAU (P81297) Staphopain A precursor (EC 3.4.22.48) (Staph...	28	6.8
27	SSPP_STAAR (Q6GFE8) Staphopain A precursor (EC 3.4.22.48) (Staph...	28	6.8
28	MT2_SCYSE (P02806) Metallothionein-2 (MT-2) (Metallothionein-II)...	28	6.8
29	LRP12_MOUSE (Q8BUJ9) Low-density lipoprotein receptor-related pr...	28	6.8
30	MLO10_ARATH (Q9FKY5) MLO-like protein 10 (AtMlo10)	28	6.8
31	ADA20_HUMAN (O43506) ADAM 20 precursor (EC 3.4.24.-) (A disinteg...	28	6.8
32	YGH9_YEAST (P53158) Hypothetical 24.4 kDa protein in SCY1-DBP3 i...	28	6.8
33	CCNL1_CHICK (Q5ZJP9) Cyclin-L1	27	8.9
34	SORL_CHICK (Q98930) Sortilin-related receptor (Sorting protein-r...	27	8.9
35	MT1_SCYSE (P02805) Metallothionein-1 (MT-1) (Metallothionein-I) ...	27	8.9
36	MT1_HOMAM (P29499) Metallothionein-1 (CuMT-1)	27	8.9
37	TYSY_BPT4 (P00471) Thymidylate synthase (EC 2.1.1.45) (TS) (TSase)	27	8.9
38	SP70_DICDI (P15269) Spore coat protein SP70 precursor (Beejin pr...	27	8.9
39	LAMC2_MOUSE (Q61092) Laminin gamma-2 chain precursor (Laminin 5 ...	27	8.9
40	AHM6_ARATH (Q9SZC9) Putative copper-transporting ATPase PAA1 (EC...	27	8.9
41	SORL_MOUSE (O88307) Sortilin-related receptor precursor (Sorting...	27	8.9

>LRP1B_MOUSE (Q9JI18) Low-density lipoprotein receptor-related protein 1B|
            precursor (Low-density lipoprotein receptor-related
            protein-deleted in tumor) (LRP-DIT)
          Length = 4599

 Score = 31.6 bits (70), Expect = 0.47
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +1

Query: 169  FRCSNCNCVPSEFRCSNCNE 228
            F+C N NC+P  +RC N N+
Sbjct: 3481 FQCKNNNCIPDHWRCDNQND 3500



 Score = 28.9 bits (63), Expect = 3.1
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +1

Query: 169  FRCSNCNCVPSEFRCSNCNE 228
            F CSN NC+P E +C + ++
Sbjct: 3767 FTCSNRNCIPMELQCDSLDD 3786

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>ZSWM2_MOUSE (Q9D9X6) Zinc finger SWIM domain-containing protein 2|
          Length = 631

 Score = 30.8 bits (68), Expect = 0.81
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +1

Query: 166 GFRCSNCNCVPSEFRCSNCNELLPEYCLQ 252
           G  C+NCN +P E RC  C E +  +  Q
Sbjct: 232 GIPCNNCNQLPIEGRCYKCTECVEYHLCQ 260

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>LRP_CAEEL (Q04833) Low-density lipoprotein receptor-related protein precursor|
            (LRP)
          Length = 4753

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
 Frame = +1

Query: 154  LCSFG---FRCSNCNCVPSEFRCSNCNELLPE 240
            LCS     F+C N  C+P E++C   N+ L E
Sbjct: 1053 LCSSNSTQFQCKNGRCIPKEWKCDGENDCLDE 1084



 Score = 28.1 bits (61), Expect = 5.2
 Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
 Frame = +1

Query: 157  CS-FGFRCSNCNCVPSEFRCSNCNE 228
            CS F F C+N  C+P +F C   N+
Sbjct: 3959 CSPFEFECANSVCIPRKFMCDGDND 3983



 Score = 27.7 bits (60), Expect = 6.8
 Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = +1

Query: 157  CSFG-FRCSNCNCVPSEFRCSNCNELL 234
            C+ G FRCSN +C+ S + C   N+ L
Sbjct: 3100 CNKGEFRCSNQHCIHSTWECDGDNDCL 3126

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>Y875_RICPR (Q9ZC92) Hypothetical protein RP875|
          Length = 174

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 15/28 (53%), Positives = 19/28 (67%), Gaps = 4/28 (14%)
 Frame = -1

Query: 250 EDNIQEVIH----YNLNIGTRKEHNYNL 179
           EDNI+E I+    YNL + T  EHNYN+
Sbjct: 101 EDNIKEAINFIVTYNLTLITLVEHNYNI 128

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>ADA22_XENLA (O42596) ADAM 22 precursor (A disintegrin and metalloproteinase|
           domain 22) (Metalloprotease-disintegrin MDC11b)
           (MDC11.2)
          Length = 935

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 4/40 (10%)
 Frame = +1

Query: 157 CSFGFRCSNCNCVPSEFRC----SNCNELLPEYCLQSTLQ 264
           CS G  CSNC   P E  C    ++C+  +PE C  +T Q
Sbjct: 487 CSDGLCCSNCKFNPKEMLCREAVNDCD--IPETCTGNTSQ 524

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>LRP12_MACFA (Q9BE74) Low-density lipoprotein receptor-related protein 12|
           (Fragment)
          Length = 701

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +1

Query: 169 FRCSNCNCVPSEFRCSNCNE 228
           FRC N  C+P  ++C+N +E
Sbjct: 13  FRCGNGKCIPEAWKCNNMDE 32

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>LRP1B_HUMAN (Q9NZR2) Low-density lipoprotein receptor-related protein 1B|
            precursor (Low-density lipoprotein receptor-related
            protein-deleted in tumor) (LRP-DIT)
          Length = 4599

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +1

Query: 169  FRCSNCNCVPSEFRCSNCNE 228
            F+C N NC+P  +RC + N+
Sbjct: 3481 FQCKNNNCIPDHWRCDSQND 3500



 Score = 27.7 bits (60), Expect = 6.8
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = +1

Query: 169  FRCSNCNCVPSEFRC 213
            FRCSN  C+P++++C
Sbjct: 3558 FRCSNGQCIPAKWKC 3572

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>LRP12_HUMAN (Q9Y561) Low-density lipoprotein receptor-related protein 12|
           precursor (Suppressor of tumorigenicity protein 7)
          Length = 859

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +1

Query: 169 FRCSNCNCVPSEFRCSNCNE 228
           FRC N  C+P  ++C+N +E
Sbjct: 171 FRCGNGKCIPEAWKCNNMDE 190

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>LRP2_RAT (P98158) Low-density lipoprotein receptor-related protein 2 precursor|
            (Megalin) (Glycoprotein 330) (gp330)
          Length = 4660

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
 Frame = +1

Query: 133  LPMCRL*LCSFG-FRCSNCNCVPSEFRCSNCNE 228
            L  C +  CS G F C+N  CV   FRC   N+
Sbjct: 2987 LQNCTMRTCSAGEFSCANGRCVRQSFRCDRRND 3019



 Score = 29.3 bits (64), Expect = 2.3
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +1

Query: 160  SFGFRCSNCNCVPSEFRCSNCNE 228
            S  F C+N  CVPS FRC   ++
Sbjct: 1027 SLSFPCNNGKCVPSFFRCDGVDD 1049



 Score = 29.3 bits (64), Expect = 2.3
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +1

Query: 175 CSNCNCVPSEFRCSNCNE 228
           CSN  C+PSE+RC + ++
Sbjct: 115 CSNGQCIPSEYRCDHVSD 132



 Score = 28.5 bits (62), Expect = 4.0
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 160 SFGFRCSNCNCVPSEFRCSNCNELLPE 240
           S  FRC N  C+P+ +RC    + L +
Sbjct: 30  SGNFRCDNGYCIPASWRCDGTRDCLDD 56



 Score = 27.7 bits (60), Expect = 6.8
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 169  FRCSNCNCVPSEFRCSNCNE 228
            ++CSN NC+   + C N N+
Sbjct: 3935 YKCSNGNCISQHYVCDNVND 3954



 Score = 27.3 bits (59), Expect = 8.9
 Identities = 12/31 (38%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
 Frame = +1

Query: 139  MCRL*LC-SFGFRCSNCNCVPSEFRCSNCNE 228
            +C    C S  F C N  CVP  +RC   N+
Sbjct: 2736 VCAFHTCRSTAFTCGNGRCVPYHYRCDYYND 2766



 Score = 25.0 bits (53), Expect(2) = 7.1
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 169  FRCSNCNCVPSEFRCSNCNE 228
            FRC++  C+PS + C   N+
Sbjct: 3766 FRCADQQCIPSRWVCDQEND 3785



 Score = 20.8 bits (42), Expect(2) = 7.1
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +2

Query: 134  FRCADCNCVP 163
            FRCA+ +C+P
Sbjct: 3727 FRCANHHCIP 3736

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>SORL_RABIT (Q95209) Sortilin-related receptor precursor (Sorting protein-related|
            receptor containing LDLR class A repeats) (SorLA)
            (SorLA-1) (Low-density lipoprotein receptor relative with
            11 ligand-binding repeats) (LDLR relative with 11
            ligand-binding
          Length = 2213

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +1

Query: 163  FGFRCSNCNCVPSEFRCSNCNE 228
            F FRC N +C+P+ ++C   N+
Sbjct: 1371 FQFRCDNGHCIPNRWKCDREND 1392

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>MT_CARMA (P55948) Metallothionein (MT)|
          Length = 58

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +1

Query: 157 CSFGFRCSNCNCVPSEFRCSNCNELLPEYCLQS 255
           C  G +C++C C P E   S C     E C ++
Sbjct: 17  CKAGCKCTSCRCTPCEKCSSGCKCTTKEDCCKT 49

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>SORL_HUMAN (Q92673) Sortilin-related receptor precursor (Sorting protein-related|
            receptor containing LDLR class A repeats) (SorLA)
            (SorLA-1) (Low-density lipoprotein receptor relative with
            11 ligand-binding repeats) (LDLR relative with 11
            ligand-binding
          Length = 2214

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +1

Query: 163  FGFRCSNCNCVPSEFRCSNCNE 228
            F FRC N +C+P+ ++C   N+
Sbjct: 1372 FQFRCENGHCIPNRWKCDREND 1393

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>PSTB_MYCGA (Q7NC40) Phosphate import ATP-binding protein pstB (EC 3.6.3.27)|
           (Phosphate-transporting ATPase) (ABC phosphate
           transporter)
          Length = 326

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 13/34 (38%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
 Frame = -1

Query: 247 DNIQEVIHYNLNIGTRKEHNY-NLNIGIRRNTIT 149
           DNI E+ +YNL    + +H   ++N+GI++N +T
Sbjct: 75  DNIFEIDNYNLWYSNKAKHALKDINLGIKKNKVT 108

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>LRP2_HUMAN (P98164) Low-density lipoprotein receptor-related protein 2|
           precursor (Megalin) (Glycoprotein 330) (gp330)
          Length = 4655

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +1

Query: 175 CSNCNCVPSEFRCSNCNE 228
           CSN  C+PSE+RC +  +
Sbjct: 115 CSNGQCIPSEYRCDHVRD 132



 Score = 27.7 bits (60), Expect = 6.8
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1

Query: 169  FRCSNCNCVPSEFRCSNCNE 228
            F CSN  C+  E++C N N+
Sbjct: 2705 FTCSNGRCISEEWKCDNDND 2724

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>YJJW_ECOLI (P39409) Hypothetical protein yjjW|
          Length = 287

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 16/48 (33%), Positives = 24/48 (50%)
 Frame = +1

Query: 127 VFLPMCRL*LCSFGFRCSNCNCVPSEFRCSNCNELLPEYCLQSTLQTI 270
           +FL  C L       RC NC+   +  RC++C E +P+ C    LQ +
Sbjct: 26  LFLQGCNL-------RCKNCHNPWTMGRCNDCGECVPQ-CPHQALQIV 65

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>LRP1_HUMAN (Q07954) Low-density lipoprotein receptor-related protein 1 precursor|
            (LRP) (Alpha-2-macroglobulin receptor) (A2MR)
            (Apolipoprotein E receptor) (APOER) (CD91 antigen)
          Length = 4544

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 10/23 (43%), Positives = 17/23 (73%), Gaps = 3/23 (13%)
 Frame = +1

Query: 178  SNCN---CVPSEFRCSNCNELLP 237
            +NC+   C+PS+F+C+N N  +P
Sbjct: 3406 ANCDIHVCLPSQFKCTNTNRCIP 3428

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>LRP1_CHICK (P98157) Low-density lipoprotein receptor-related protein 1 precursor|
            (LRP) (Alpha-2-macroglobulin receptor) (A2MR)
          Length = 4543

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 10/23 (43%), Positives = 17/23 (73%), Gaps = 3/23 (13%)
 Frame = +1

Query: 178  SNCN---CVPSEFRCSNCNELLP 237
            +NC+   C+PS+F+C+N N  +P
Sbjct: 3403 ANCDIHVCLPSQFKCTNTNRCIP 3425

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>DGKE_HUMAN (P52429) Diacylglycerol kinase epsilon (EC 2.7.1.107) (Diglyceride|
           kinase epsilon) (DGK-epsilon) (DAG kinase epsilon)
          Length = 567

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 12/45 (26%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
 Frame = +1

Query: 154 LCSFGFRCSN-CNCVPS--EFRCSNCNELLPEYCLQSTLQTIRAE 279
           LCS+   C   C C P   ++RC  C + + + C++++L+  + +
Sbjct: 134 LCSYCMVCKQQCGCQPKLCDYRCIWCQKTVHDECMKNSLKNEKCD 178

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>TMPS7_HUMAN (Q7RTY8) Transmembrane protease, serine 7 precursor (EC 3.4.21.-)|
          Length = 572

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
 Frame = +1

Query: 157 CSFG-FRCSNCNCVPSEFRCSNCNELLPEYCLQSTLQTIRAEPQFIFPLYKQKPPL 321
           C  G FRCS+  CVP   RC   N+   E      L  +  +P      ++Q  PL
Sbjct: 213 CPVGSFRCSSGLCVPQAQRCDGVNDCFDE---SDELFCVSPQPACNTSSFRQHGPL 265

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>YCNL_BACSU (P94434) Hypothetical protein ycnL|
          Length = 117

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = +1

Query: 136 PMCRL*LCSFGFRCSNCNCVPSEFRCSNCNELLPEYCLQSTLQTI 270
           P C   L     R SN   VP +FRC +C E L EY + + +  +
Sbjct: 7   PNCGKPLTGDMVRSSN---VPCQFRCGHCRERLYEYKVSAPIMLV 48

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>ADA21_HUMAN (Q9UKJ8) ADAM 21 precursor (EC 3.4.24.-) (A disintegrin and|
           metalloproteinase domain 21)
          Length = 722

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
 Frame = +1

Query: 157 CSFGFRCSNCNCVPSEFRC-SNCNEL-LPEYC 246
           C+FG  C +C  +PS   C    NE  LPE+C
Sbjct: 446 CAFGLCCKDCKFMPSGELCRQEVNECDLPEWC 477

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>ADA29_HUMAN (Q9UKF5) ADAM 29 precursor (A disintegrin and metalloproteinase|
           domain 29)
          Length = 820

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
 Frame = +1

Query: 157 CSFGFRCSNCNCVPSEFRC-SNCNEL-LPEYC 246
           C+FG  C +C  +PS   C    NE  LPE+C
Sbjct: 437 CAFGLCCKDCKFLPSGKVCRKEVNECDLPEWC 468

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>TMPS7_MOUSE (Q8BIK6) Transmembrane protease, serine 7 precursor (EC 3.4.21.-)|
          Length = 572

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 16/51 (31%), Positives = 22/51 (43%)
 Frame = +1

Query: 169 FRCSNCNCVPSEFRCSNCNELLPEYCLQSTLQTIRAEPQFIFPLYKQKPPL 321
           FRCS+  CVP   RC   N+   E      L  +  +P      ++Q  PL
Sbjct: 218 FRCSSGLCVPQAQRCDGVNDCFDE---SDELFCVTVKPACNSSSFRQHGPL 265

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>MT_POTPO (P55952) Metallothionein (MT)|
          Length = 58

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +1

Query: 157 CSFGFRCSNCNCVPSEFRCSNCNELLPEYCLQS 255
           C  G +C++C C P E   S C     E C ++
Sbjct: 17  CKAGCKCTSCRCSPCEKCTSECECKSKEECAKN 49

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>Y065_WIGBR (Q8D3D6) UPF0176 protein WIGBR0650|
          Length = 315

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = +1

Query: 142 CRL*LCSFGFRCSNCNCVPSEFRCSNCNELLPEYC 246
           C++  C     C N  C     +C  CN+ L E+C
Sbjct: 269 CKIQPCDNYINCKNKKCNSLFIQCIYCNKTLNEFC 303

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>SSPP_STAAU (P81297) Staphopain A precursor (EC 3.4.22.48) (Staphylopain A)|
           (Staphylococcal cysteine proteinase A)
          Length = 388

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = -3

Query: 278 SALIVCNVD*RQYSGSNSLQFEHRNSEGTQLQFEHRNPKEHNY 150
           SAL+    +  +Y     ++F H N +G Q QF    P+E  Y
Sbjct: 244 SALLNATYNTNKYHAEAVMRFLHPNLQGQQFQFTGLTPREMIY 286

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>SSPP_STAAR (Q6GFE8) Staphopain A precursor (EC 3.4.22.48) (Staphylopain A)|
           (Staphylococcal cysteine proteinase A)
          Length = 388

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = -3

Query: 278 SALIVCNVD*RQYSGSNSLQFEHRNSEGTQLQFEHRNPKEHNY 150
           SAL+    +  +Y     ++F H N +G Q QF    P+E  Y
Sbjct: 244 SALLNATYNTNKYHAEAVMRFLHPNLQGQQFQFTGLTPREMIY 286

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>MT2_SCYSE (P02806) Metallothionein-2 (MT-2) (Metallothionein-II) (MT-II)|
          Length = 57

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = +1

Query: 142 CRL*LCSFGFRCSNCNCVPSEFRCSNCNELLPEYC 246
           C+   C  G +C++C C P E   S C     E C
Sbjct: 11  CKEGECKTGCKCTSCRCPPCEQCSSGCKCANKEDC 45

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>LRP12_MOUSE (Q8BUJ9) Low-density lipoprotein receptor-related protein 12|
           precursor
          Length = 858

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +1

Query: 169 FRCSNCNCVPSEFRCSNCNE 228
           FRC N  C+P  ++C++ +E
Sbjct: 171 FRCGNGKCIPEAWKCNSMDE 190

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>MLO10_ARATH (Q9FKY5) MLO-like protein 10 (AtMlo10)|
          Length = 569

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
 Frame = +3

Query: 108 SVGL*SCVPSDVQIVIVFLRIPMFKL*LCSF-RVPMFKL 221
           S GL SC  +D ++VIV L + +  L LCS+  +P++ L
Sbjct: 394 SFGLKSCFHTDFKLVIVKLSLGVGALILCSYITLPLYAL 432

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>ADA20_HUMAN (O43506) ADAM 20 precursor (EC 3.4.24.-) (A disintegrin and|
           metalloproteinase domain 20)
          Length = 726

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 4/34 (11%)
 Frame = +1

Query: 157 CSFGFRCSNCNCVPSEFRC----SNCNELLPEYC 246
           C+FG  C +C  +PS   C      C+  LPE+C
Sbjct: 447 CAFGICCKDCKFLPSGTLCRQQVGECD--LPEWC 478

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>YGH9_YEAST (P53158) Hypothetical 24.4 kDa protein in SCY1-DBP3 intergenic|
           region
          Length = 218

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = +1

Query: 283 QFIFPLYKQKPPLGDFSSSTTKPLKYSKSVRSKNLTMMQY 402
           ++IF   KQ     DFS + +   K S  + SK+L + QY
Sbjct: 110 RYIFDSLKQSIDSADFSEALSLQTKTSAVINSKSLELKQY 149

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>CCNL1_CHICK (Q5ZJP9) Cyclin-L1|
          Length = 534

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 12/45 (26%), Positives = 23/45 (51%)
 Frame = -3

Query: 248 RQYSGSNSLQFEHRNSEGTQLQFEHRNPKEHNYNLHIGRNTTSQA 114
           R  SGS   QF H ++  +     ++  K++ Y+ H  R + S++
Sbjct: 435 RSRSGSPPRQFNHSSTYKSSKMRSYKKSKDYKYSAHKARKSRSRS 479

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>SORL_CHICK (Q98930) Sortilin-related receptor (Sorting protein-related receptor|
            containing LDLR class A repeats) (SorLA) (SorLA-1)
            (Low-density lipoprotein receptor relative with 11
            ligand-binding repeats) (LDLR relative with 11
            ligand-binding repeats) (
          Length = 1592

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 7/22 (31%), Positives = 16/22 (72%)
 Frame = +1

Query: 163  FGFRCSNCNCVPSEFRCSNCNE 228
            + F+C N +C+P++++C   N+
Sbjct: 1279 YQFQCGNGHCIPNQWKCDGEND 1300

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>MT1_SCYSE (P02805) Metallothionein-1 (MT-1) (Metallothionein-I) (MT-I)|
          Length = 58

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +1

Query: 139 MCRL*LCSFGFRCSNCNCVPSEFRCSNCNELLPEYC 246
           +C+   C  G +C++C C P E   S C     E C
Sbjct: 10  VCKEGGCKEGCQCTSCRCSPCEKCSSGCKCANKEEC 45

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>MT1_HOMAM (P29499) Metallothionein-1 (CuMT-1)|
          Length = 58

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +1

Query: 157 CSFGFRCSNCNCVPSEFRCSNC 222
           C  G +C++C C P E   S C
Sbjct: 16  CKTGCKCTSCRCAPCEKCTSGC 37

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>TYSY_BPT4 (P00471) Thymidylate synthase (EC 2.1.1.45) (TS) (TSase)|
          Length = 286

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 18/73 (24%), Positives = 31/73 (42%)
 Frame = +1

Query: 184 CNCVPSEFRCSNCNELLPEYCLQSTLQTIRAEPQFIFPLYKQKPPLGDFSSSTTKPLKYS 363
           CN +P +   S  N  +    ++   + +R EP+ +  L     P      ST + LKY 
Sbjct: 202 CNLIPGDLIFSGGNTHIYMNHVEQCKEILRREPKELCELVISGLPYKFRYLSTKEQLKYV 261

Query: 364 KSVRSKNLTMMQY 402
             +R K+  +  Y
Sbjct: 262 LKLRPKDFVLNNY 274

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>SP70_DICDI (P15269) Spore coat protein SP70 precursor (Beejin protein)|
          Length = 537

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 7/25 (28%), Positives = 13/25 (52%)
 Frame = +1

Query: 157 CSFGFRCSNCNCVPSEFRCSNCNEL 231
           C  G+ C N  C+  +  C  C+++
Sbjct: 284 CGSGYHCKNGECIRDKVECDACDQI 308

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>LAMC2_MOUSE (Q61092) Laminin gamma-2 chain precursor (Laminin 5 gamma 2|
           subunit) (Kalinin/nicein/epiligrin 100 kDa subunit)
           (Laminin B2t chain)
          Length = 1191

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +1

Query: 166 GFRCSNCNCVPSEFRCSNCNE 228
           GFRC NCN   +   C  C E
Sbjct: 50  GFRCLNCNDNTAGVHCERCRE 70

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>AHM6_ARATH (Q9SZC9) Putative copper-transporting ATPase PAA1 (EC 3.6.3.4)|
          Length = 949

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 19/73 (26%), Positives = 34/73 (46%)
 Frame = +2

Query: 29  TGNMLLVLLTRKVYNQIKVYVTKY*SICRLVKLCSFRCADCNCVPSDSDVQIVIVFLPSS 208
           TGN LL L   ++ NQ  VY+    ++  +++       D   V  +   Q + V++ S 
Sbjct: 701 TGNSLLALEEHEINNQSVVYIGVDNTLAAVIRFEDKVREDAAQVVENLTRQGIDVYMLSG 760

Query: 209 DVQIVMNYFLNIV 247
           D +   NY  ++V
Sbjct: 761 DKRNAANYVASVV 773

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>SORL_MOUSE (O88307) Sortilin-related receptor precursor (Sorting protein-related|
            receptor containing LDLR class A repeats) (mSorLA)
            (SorLA-1) (Low-density lipoprotein receptor relative with
            11 ligand-binding repeats) (LDLR relative with 11
            ligand-binding
          Length = 2215

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +1

Query: 163  FGFRCSNCNCVPSEFRCSNCNE 228
            F F C N +C+P+ ++C   N+
Sbjct: 1372 FQFHCENGHCIPNRWKCDREND 1393


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,905,090
Number of Sequences: 219361
Number of extensions: 1085877
Number of successful extensions: 3293
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 2938
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3291
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 1359926328
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result