Clone Name | rbastl26g09 |
---|---|
Clone Library Name | barley_pub |
>emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome Length = 3523383 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 234 tcctgaatattgtcttcagtc 254 ||||||||||||||||||||| Sbjct: 3158977 tcctgaatattgtcttcagtc 3158957
>gb|AC150414.2| Branchiostoma floridae clone CH302-62C22, complete sequence Length = 210179 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 ttcggattccgatgttcaaa 182 |||||||||||||||||||| Sbjct: 116365 ttcggattccgatgttcaaa 116346
>gb|AC137836.25| Medicago truncatula clone mth2-10f14, complete sequence Length = 140197 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 gttcaaattgtaattgtgtt 195 |||||||||||||||||||| Sbjct: 96968 gttcaaattgtaattgtgtt 96987
>gb|AC166352.1| Mus musculus BAC clone RP24-234M1 from chromosome 9, complete sequence Length = 166299 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 ggagacttttcaagctctac 341 |||||||||||||||||||| Sbjct: 147682 ggagacttttcaagctctac 147663
>gb|AC139290.15| Medicago truncatula clone mth2-23f4, complete sequence Length = 127701 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 gttcaaattgtaattgtgtt 195 |||||||||||||||||||| Sbjct: 125802 gttcaaattgtaattgtgtt 125821
>gb|AC107302.4| Homo sapiens 3 BAC RP11-564P9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 194234 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 6 agatggctagtaggtagattaata 29 ||||||||||||||| |||||||| Sbjct: 14767 agatggctagtaggttgattaata 14790
>gb|AC099049.2| Homo sapiens chromosome 3 clone RP11-291P10, complete sequence Length = 180339 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 6 agatggctagtaggtagattaata 29 ||||||||||||||| |||||||| Sbjct: 76544 agatggctagtaggttgattaata 76521
>gb|AC137524.4| Mus musculus BAC clone RP23-55M20 from chromosome 7, complete sequence Length = 253824 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 tgttcaaattgtaattgtgt 194 |||||||||||||||||||| Sbjct: 137976 tgttcaaattgtaattgtgt 137957
>gb|AC010366.6| Homo sapiens chromosome 5 clone CTD-2044J15, complete sequence Length = 115396 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 aaattgtaatgaattacttc 235 |||||||||||||||||||| Sbjct: 39272 aaattgtaatgaattacttc 39291
>gb|AF321236.1|AF321236 Mus musculus chromosome 7E3 m50 olfactory receptor and B3 olfactory receptor genes, complete cds Length = 20744 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 tgttcaaattgtaattgtgt 194 |||||||||||||||||||| Sbjct: 4134 tgttcaaattgtaattgtgt 4153
>gb|AY188864.1| Streblomastix strix clone 1 heat shock protein 90 gene, partial cds Length = 1696 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 217 aattgtaatgaattacttcctgaatatt 244 |||||| |||||||| |||||||||||| Sbjct: 992 aattgtgatgaattaattcctgaatatt 1019
>dbj|BA000011.4| Thermoplasma volcanium GSS1 DNA, complete genome Length = 1584804 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 aataaaagtatacgttacaa 95 |||||||||||||||||||| Sbjct: 708282 aataaaagtatacgttacaa 708263
>gb|AC154277.1| Mus musculus BAC clone RP24-266G7 from 9, complete sequence Length = 168300 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 ggagacttttcaagctctac 341 |||||||||||||||||||| Sbjct: 124123 ggagacttttcaagctctac 124142 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,679,949 Number of Sequences: 3902068 Number of extensions: 3679949 Number of successful extensions: 69973 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 69941 Number of HSP's gapped (non-prelim): 32 length of query: 403 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 381 effective length of database: 17,147,199,772 effective search space: 6533083113132 effective search space used: 6533083113132 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)