Clone Name | rbastl26g04 |
---|---|
Clone Library Name | barley_pub |
>gb|AY220737.1| Hordeum vulgare lipoxygenase 1 protein (LOXA) mRNA, partial cds Length = 1331 Score = 670 bits (338), Expect = 0.0 Identities = 353/358 (98%) Strand = Plus / Minus Query: 1 ggaagcaaatctgctttatttattcggcttaaagagcaactgctgacatagtactggcac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1228 ggaagcaaatctgctttatttattcggcttaaagagcaactgctgacatagtactgtcac 1169 Query: 61 agacacacactacaccaatctctcgacaagtttcgtacgtggcgaacgccctttattcat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1168 agacacacactacaccaatctctcgacaagtttcgtacgtggcgaacgccctttattcat 1109 Query: 121 ccatggttgccgatggcttaaattaaatggaaatgctgtcggggatgcccttggcggtaa 180 ||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||| Sbjct: 1108 ccatggttgccgatggcttaaattagatggagatgctgttggggatgcccttggcggtaa 1049 Query: 181 gcccggcagcggcgcccttgtggtcggaggtgttggggtaaagcagcatgtagggaaact 240 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 1048 gcccggcagcggcgcccttgtggtcggaggtgttggggtagagcagcatgtagggaaact 989 Query: 241 tagccgggccgttgcggttcttgagctccgggtcatggttcatgcccaccaccttgctct 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 988 tagccgggccgttgcggttcttgagctccgggtcatggttcatgcccaccaccttgctct 929 Query: 301 cgatctccaccagccggtcgctgaaccgcttgaacacctccagggcctttgggtccga 358 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 928 cgatctccaccagccggtcgctgaaccgcttgaacacctccagggcctttgggtccga 871
>gb|L35931.1|BLYLOXA Barley lipoxygenase 1 (LoxA) gene, complete cds Length = 2818 Score = 662 bits (334), Expect = 0.0 Identities = 352/358 (98%) Strand = Plus / Minus Query: 1 ggaagcaaatctgctttatttattcggcttaaagagcaactgctgacatagtactggcac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 2799 ggaagcaaatctgctttatttattcggcttaaagagcaactgctgacatagtactgtcac 2740 Query: 61 agacacacactacaccaatctctcgacaagtttcgtacgtggcgaacgccctttattcat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2739 agacacacactacaccaatctctcgacaagtttcgtacgtggcgaacgccctttattcat 2680 Query: 121 ccatggttgccgatggcttaaattaaatggaaatgctgtcggggatgcccttggcggtaa 180 |||||||||||||||||||| |||| ||||| ||||||| |||||||||||||||||||| Sbjct: 2679 ccatggttgccgatggcttagattagatggagatgctgttggggatgcccttggcggtaa 2620 Query: 181 gcccggcagcggcgcccttgtggtcggaggtgttggggtaaagcagcatgtagggaaact 240 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 2619 gcccggcagcggcgcccttgtggtcggaggtgttggggtagagcagcatgtagggaaact 2560 Query: 241 tagccgggccgttgcggttcttgagctccgggtcatggttcatgcccaccaccttgctct 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2559 tagccgggccgttgcggttcttgagctccgggtcatggttcatgcccaccaccttgctct 2500 Query: 301 cgatctccaccagccggtcgctgaaccgcttgaacacctccagggcctttgggtccga 358 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2499 cgatctccaccagccggtcgctgaaccgcttgaacacctccagggcctttgggtccga 2442
>gb|BT008992.1| Triticum aestivum clone wdk2c.pk011.j13:fis, full insert mRNA sequence Length = 1020 Score = 270 bits (136), Expect = 3e-69 Identities = 193/212 (91%) Strand = Plus / Minus Query: 147 atggaaatgctgtcggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 206 ||||| ||||||| |||||||||||| ||||| |||||||| |||||||||||||| ||| Sbjct: 749 atggagatgctgttggggatgcccttagcggtgagcccggcggcggcgcccttgtgatcg 690 Query: 207 gaggtgttggggtaaagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 266 |||||||||||||| |||| ||||||||| ||||| ||||| |||||||||||| ||| Sbjct: 689 gaggtgttggggtagagcaacatgtaggggaacttggccggaccgttgcggttcaacagc 630 Query: 267 tccgggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaac 326 | |||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 629 tgcgggtcgtggttcatgcccaccaccttgctctcgatctccactagccgctcgctgaac 570 Query: 327 cgcttgaacacctccagggcctttgggtccga 358 ||||||||||||||||||||||| |||||||| Sbjct: 569 cgcttgaacacctccagggccttggggtccga 538
>gb|AY720897.2| Triticum aestivum lipoxygenase gene, partial sequence Length = 934 Score = 254 bits (128), Expect = 2e-64 Identities = 186/206 (90%) Strand = Plus / Plus Query: 153 atgctgtcggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcggaggtg 212 ||||||| |||||||||||||||||| || ||||| ||||| ||||||||||| ||||| Sbjct: 1 atgctgttggggatgcccttggcggtgaggccggcggcggcacccttgtggtcttaggtg 60 Query: 213 ttggggtaaagcagcatgtagggaaacttagccgggccgttgcggttcttgagctccggg 272 || ||||| |||||||||||||| | ||| |||||||||||||||||| |||| |||| Sbjct: 61 ttagggtagagcagcatgtaggggagcttggccgggccgttgcggttcaacagctgcggg 120 Query: 273 tcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaaccgcttg 332 || ||||||||||||||||||||||||||||||||||||||||| || |||||||||||| Sbjct: 121 tcgtggttcatgcccaccaccttgctctcgatctccaccagccgctcrctgaaccgcttg 180 Query: 333 aacacctccagggcctttgggtccga 358 ||||||||||||||||| |||||||| Sbjct: 181 aacacctccagggccttggggtccga 206
>ref|XM_469409.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2601 Score = 172 bits (87), Expect = 5e-40 Identities = 165/191 (86%) Strand = Plus / Minus Query: 153 atgctgtcggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcggaggtg 212 ||||||| |||||||||||||||||| | ||||| |||||||| || |||||||||| Sbjct: 2591 atgctgttggggatgcccttggcggtgatgccggcggcggcgccggtgacgtcggaggtg 2532 Query: 213 ttggggtaaagcagcatgtagggaaacttagccgggccgttgcggttcttgagctccggg 272 |||||||||||||||||||| || |||| || ||||| ||||||||||||||| ||| | Sbjct: 2531 ttggggtaaagcagcatgtatgggaactcggctgggccattgcggttcttgagccccgcg 2472 Query: 273 tcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaaccgcttg 332 || |||||||||||||||||| | |||||||||||||||||||||||||||||| | Sbjct: 2471 tcgccgttcatgcccaccaccttcccttcgatctccaccagccggtcgctgaaccgccgg 2412 Query: 333 aacacctccag 343 ||| ||||||| Sbjct: 2411 aacgcctccag 2401
>gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0024B16 map S2606, complete sequence Length = 124140 Score = 172 bits (87), Expect = 5e-40 Identities = 165/191 (86%) Strand = Plus / Minus Query: 153 atgctgtcggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcggaggtg 212 ||||||| |||||||||||||||||| | ||||| |||||||| || |||||||||| Sbjct: 47227 atgctgttggggatgcccttggcggtgatgccggcggcggcgccggtgacgtcggaggtg 47168 Query: 213 ttggggtaaagcagcatgtagggaaacttagccgggccgttgcggttcttgagctccggg 272 |||||||||||||||||||| || |||| || ||||| ||||||||||||||| ||| | Sbjct: 47167 ttggggtaaagcagcatgtatgggaactcggctgggccattgcggttcttgagccccgcg 47108 Query: 273 tcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaaccgcttg 332 || |||||||||||||||||| | |||||||||||||||||||||||||||||| | Sbjct: 47107 tcgccgttcatgcccaccaccttcccttcgatctccaccagccggtcgctgaaccgccgg 47048 Query: 333 aacacctccag 343 ||| ||||||| Sbjct: 47047 aacgcctccag 47037 Score = 50.1 bits (25), Expect = 0.005 Identities = 49/57 (85%) Strand = Plus / Minus Query: 210 gtgttggggtaaagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 266 ||||||||||| ||||||||||| || | ||| |||| ||||| |||||||||||| Sbjct: 65746 gtgttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagc 65690 Score = 42.1 bits (21), Expect = 1.2 Identities = 51/61 (83%) Strand = Plus / Minus Query: 298 tctcgatctccaccagccggtcgctgaaccgcttgaacacctccagggcctttgggtccg 357 ||||||| |||||||||||| || ||||| ||||||| | ||||| ||||| | ||||| Sbjct: 65658 tctcgatatccaccagccggctgccgaacctcttgaacgcgtccagcgccttggcgtccg 65599 Query: 358 a 358 | Sbjct: 65598 a 65598 Score = 42.1 bits (21), Expect = 1.2 Identities = 81/101 (80%) Strand = Plus / Minus Query: 255 cggttcttgagctccgggtcatggttcatgcccaccaccttgctctcgatctccaccagc 314 |||||||||||| ||||| | ||||||| || ||| |||||||| |||||||||||| Sbjct: 6075 cggttcttgagcagggggtccttgttcatgttcaacactttgctctcaatctccaccagc 6016 Query: 315 cggtcgctgaaccgcttgaacacctccagggcctttgggtc 355 | |||||||| |||||| | ||||| ||||| ||||| Sbjct: 6015 tgcctgctgaacctcttgaatgcttccagtgccttggggtc 5975
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 172 bits (87), Expect = 5e-40 Identities = 165/191 (86%) Strand = Plus / Minus Query: 153 atgctgtcggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcggaggtg 212 ||||||| |||||||||||||||||| | ||||| |||||||| || |||||||||| Sbjct: 27803097 atgctgttggggatgcccttggcggtgatgccggcggcggcgccggtgacgtcggaggtg 27803038 Query: 213 ttggggtaaagcagcatgtagggaaacttagccgggccgttgcggttcttgagctccggg 272 |||||||||||||||||||| || |||| || ||||| ||||||||||||||| ||| | Sbjct: 27803037 ttggggtaaagcagcatgtatgggaactcggctgggccattgcggttcttgagccccgcg 27802978 Query: 273 tcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaaccgcttg 332 || |||||||||||||||||| | |||||||||||||||||||||||||||||| | Sbjct: 27802977 tcgccgttcatgcccaccaccttcccttcgatctccaccagccggtcgctgaaccgccgg 27802918 Query: 333 aacacctccag 343 ||| ||||||| Sbjct: 27802917 aacgcctccag 27802907 Score = 103 bits (52), Expect = 4e-19 Identities = 172/212 (81%) Strand = Plus / Minus Query: 147 atggaaatgctgtcggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 206 ||||| ||||||| |||||||||| |||||| || ||||||||| |||||||| ||||| Sbjct: 30026445 atggagatgctgttggggatgcccctggcggagaggccggcagcgtcgcccttgaggtcg 30026386 Query: 207 gaggtgttggggtaaagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 266 |||||||| ||||| |||||| ||||||| || || | ||| ||| ||||||||| | Sbjct: 30026385 gaggtgtttgggtagagcagcgtgtaggggaaattggtcggcccgacacggttcttgcgg 30026326 Query: 267 tccgggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaac 326 | ||||| | ||||||| | || || ||||||||||||| |||||| ||| |||| Sbjct: 30026325 tgggggtccttgttcatggcgacgacgcggctctcgatctccgtcagccgcgcgccgaac 30026266 Query: 327 cgcttgaacacctccagggcctttgggtccga 358 ||||||||| ||||||| ||||| | |||||| Sbjct: 30026265 cgcttgaacgcctccagcgccttggcgtccga 30026234 Score = 50.1 bits (25), Expect = 0.005 Identities = 49/57 (85%) Strand = Plus / Minus Query: 210 gtgttggggtaaagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 266 ||||||||||| ||||||||||| || | ||| |||| ||||| |||||||||||| Sbjct: 27821616 gtgttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagc 27821560 Score = 42.1 bits (21), Expect = 1.2 Identities = 51/61 (83%) Strand = Plus / Minus Query: 298 tctcgatctccaccagccggtcgctgaaccgcttgaacacctccagggcctttgggtccg 357 ||||||| |||||||||||| || ||||| ||||||| | ||||| ||||| | ||||| Sbjct: 27821528 tctcgatatccaccagccggctgccgaacctcttgaacgcgtccagcgccttggcgtccg 27821469 Query: 358 a 358 | Sbjct: 27821468 a 27821468 Score = 42.1 bits (21), Expect = 1.2 Identities = 81/101 (80%) Strand = Plus / Minus Query: 255 cggttcttgagctccgggtcatggttcatgcccaccaccttgctctcgatctccaccagc 314 |||||||||||| ||||| | ||||||| || ||| |||||||| |||||||||||| Sbjct: 27761946 cggttcttgagcagggggtccttgttcatgttcaacactttgctctcaatctccaccagc 27761887 Query: 315 cggtcgctgaaccgcttgaacacctccagggcctttgggtc 355 | |||||||| |||||| | ||||| ||||| ||||| Sbjct: 27761886 tgcctgctgaacctcttgaatgcttccagtgccttggggtc 27761846
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 172 bits (87), Expect = 5e-40 Identities = 165/191 (86%) Strand = Plus / Minus Query: 153 atgctgtcggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcggaggtg 212 ||||||| |||||||||||||||||| | ||||| |||||||| || |||||||||| Sbjct: 27894421 atgctgttggggatgcccttggcggtgatgccggcggcggcgccggtgacgtcggaggtg 27894362 Query: 213 ttggggtaaagcagcatgtagggaaacttagccgggccgttgcggttcttgagctccggg 272 |||||||||||||||||||| || |||| || ||||| ||||||||||||||| ||| | Sbjct: 27894361 ttggggtaaagcagcatgtatgggaactcggctgggccattgcggttcttgagccccgcg 27894302 Query: 273 tcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaaccgcttg 332 || |||||||||||||||||| | |||||||||||||||||||||||||||||| | Sbjct: 27894301 tcgccgttcatgcccaccaccttcccttcgatctccaccagccggtcgctgaaccgccgg 27894242 Query: 333 aacacctccag 343 ||| ||||||| Sbjct: 27894241 aacgcctccag 27894231 Score = 103 bits (52), Expect = 4e-19 Identities = 172/212 (81%) Strand = Plus / Minus Query: 147 atggaaatgctgtcggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 206 ||||| ||||||| |||||||||| |||||| || ||||||||| |||||||| ||||| Sbjct: 30117867 atggagatgctgttggggatgcccctggcggagaggccggcagcgtcgcccttgaggtcg 30117808 Query: 207 gaggtgttggggtaaagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 266 |||||||| ||||| |||||| ||||||| || || | ||| ||| ||||||||| | Sbjct: 30117807 gaggtgtttgggtagagcagcgtgtaggggaaattggtcggcccgacacggttcttgcgg 30117748 Query: 267 tccgggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaac 326 | ||||| | ||||||| | || || ||||||||||||| |||||| ||| |||| Sbjct: 30117747 tgggggtccttgttcatggcgacgacgcggctctcgatctccgtcagccgcgcgccgaac 30117688 Query: 327 cgcttgaacacctccagggcctttgggtccga 358 ||||||||| ||||||| ||||| | |||||| Sbjct: 30117687 cgcttgaacgcctccagcgccttggcgtccga 30117656 Score = 50.1 bits (25), Expect = 0.005 Identities = 49/57 (85%) Strand = Plus / Minus Query: 210 gtgttggggtaaagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 266 ||||||||||| ||||||||||| || | ||| |||| ||||| |||||||||||| Sbjct: 27912940 gtgttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagc 27912884 Score = 42.1 bits (21), Expect = 1.2 Identities = 51/61 (83%) Strand = Plus / Minus Query: 298 tctcgatctccaccagccggtcgctgaaccgcttgaacacctccagggcctttgggtccg 357 ||||||| |||||||||||| || ||||| ||||||| | ||||| ||||| | ||||| Sbjct: 27912852 tctcgatatccaccagccggctgccgaacctcttgaacgcgtccagcgccttggcgtccg 27912793 Query: 358 a 358 | Sbjct: 27912792 a 27912792 Score = 42.1 bits (21), Expect = 1.2 Identities = 81/101 (80%) Strand = Plus / Minus Query: 255 cggttcttgagctccgggtcatggttcatgcccaccaccttgctctcgatctccaccagc 314 |||||||||||| ||||| | ||||||| || ||| |||||||| |||||||||||| Sbjct: 27853269 cggttcttgagcagggggtccttgttcatgttcaacactttgctctcaatctccaccagc 27853210 Query: 315 cggtcgctgaaccgcttgaacacctccagggcctttgggtc 355 | |||||||| |||||| | ||||| ||||| ||||| Sbjct: 27853209 tgcctgctgaacctcttgaatgcttccagtgccttggggtc 27853169
>gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genomic sequence, complete sequence Length = 119329 Score = 172 bits (87), Expect = 5e-40 Identities = 165/191 (86%) Strand = Plus / Plus Query: 153 atgctgtcggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcggaggtg 212 ||||||| |||||||||||||||||| | ||||| |||||||| || |||||||||| Sbjct: 10796 atgctgttggggatgcccttggcggtgatgccggcggcggcgccggtgacgtcggaggtg 10855 Query: 213 ttggggtaaagcagcatgtagggaaacttagccgggccgttgcggttcttgagctccggg 272 |||||||||||||||||||| || |||| || ||||| ||||||||||||||| ||| | Sbjct: 10856 ttggggtaaagcagcatgtatgggaactcggctgggccattgcggttcttgagccccgcg 10915 Query: 273 tcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaaccgcttg 332 || |||||||||||||||||| | |||||||||||||||||||||||||||||| | Sbjct: 10916 tcgccgttcatgcccaccaccttcccttcgatctccaccagccggtcgctgaaccgccgg 10975 Query: 333 aacacctccag 343 ||| ||||||| Sbjct: 10976 aacgcctccag 10986 Score = 42.1 bits (21), Expect = 1.2 Identities = 81/101 (80%) Strand = Plus / Plus Query: 255 cggttcttgagctccgggtcatggttcatgcccaccaccttgctctcgatctccaccagc 314 |||||||||||| ||||| | ||||||| || ||| |||||||| |||||||||||| Sbjct: 51948 cggttcttgagcagggggtccttgttcatgttcaacactttgctctcaatctccaccagc 52007 Query: 315 cggtcgctgaaccgcttgaacacctccagggcctttgggtc 355 | |||||||| |||||| | ||||| ||||| ||||| Sbjct: 52008 tgcctgctgaacctcttgaatgcttccagtgccttggggtc 52048
>gb|AF149803.1|AF149803 Zea mays lipoxygenase mRNA, lipoxygenase-L2 allele, partial cds Length = 2267 Score = 145 bits (73), Expect = 1e-31 Identities = 160/189 (84%) Strand = Plus / Minus Query: 147 atggaaatgctgtcggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 206 ||||| ||||||| ||||||||||||||| || ||||| || |||||||| ||||||| Sbjct: 2060 atggagatgctgttggggatgcccttggcagtgagccctgcggcggcgccactgtggtca 2001 Query: 207 gaggtgttggggtaaagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 266 |||||||||||||| |||||||||||||| |||| || |||||||| | |||| | ||| Sbjct: 2000 gaggtgttggggtagagcagcatgtaggggaactcggcggggccgttcctgttcctcagc 1941 Query: 267 tccgggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaac 326 | |||||| ||||| |||||||||||||| |||||||| |||||| |||||||||| Sbjct: 1940 tgcgggtcgcggttctcgcccaccaccttgccctcgatcttgaccagcgcgtcgctgaac 1881 Query: 327 cgcttgaac 335 | ||||||| Sbjct: 1880 ctcttgaac 1872
>gb|AF465643.1| Zea mays B73 lipoxygenase gene, complete cds Length = 5013 Score = 137 bits (69), Expect = 3e-29 Identities = 159/189 (84%) Strand = Plus / Minus Query: 147 atggaaatgctgtcggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 206 ||||| ||||||| ||||||||||||||| || ||||| || |||||||| ||||||| Sbjct: 4658 atggagatgctgttggggatgcccttggcagtgagccctgcggcggcgccactgtggtca 4599 Query: 207 gaggtgttggggtaaagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 266 ||||||||||| || |||||||||||||| |||| || |||||||| | |||| | ||| Sbjct: 4598 gaggtgttgggatagagcagcatgtaggggaactcggcggggccgttcctgttcctcagc 4539 Query: 267 tccgggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaac 326 | |||||| ||||| |||||||||||||| |||||||| |||||| |||||||||| Sbjct: 4538 tgcgggtcgcggttctcgcccaccaccttgccctcgatcttgaccagcgcgtcgctgaac 4479 Query: 327 cgcttgaac 335 | ||||||| Sbjct: 4478 ctcttgaac 4470
>gb|AF329371.1|AF329371 Zea mays lipoxygenase mRNA, complete cds Length = 2595 Score = 137 bits (69), Expect = 3e-29 Identities = 159/189 (84%) Strand = Plus / Minus Query: 147 atggaaatgctgtcggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 206 ||||| ||||||| ||||||||||||||| || ||||| || |||||||| ||||||| Sbjct: 2591 atggagatgctgttggggatgcccttggcagtgagccctgcggcggcgccactgtggtca 2532 Query: 207 gaggtgttggggtaaagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 266 ||||||||||| || |||||||||||||| |||| || |||||||| | |||| | ||| Sbjct: 2531 gaggtgttgggatagagcagcatgtaggggaactcggcggggccgttcctgttcctcagc 2472 Query: 267 tccgggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaac 326 | |||||| ||||| |||||||||||||| |||||||| |||||| |||||||||| Sbjct: 2471 tgcgggtcgcggttctcgcccaccaccttgccctcgatcttgaccagcgcgtcgctgaac 2412 Query: 327 cgcttgaac 335 | ||||||| Sbjct: 2411 ctcttgaac 2403
>gb|BT009097.1| Triticum aestivum clone wkm2c.pk005.n2:fis, full insert mRNA sequence Length = 1129 Score = 111 bits (56), Expect = 2e-21 Identities = 125/148 (84%) Strand = Plus / Minus Query: 147 atggaaatgctgtcggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 206 ||||| ||||||| |||||||||| |||| || ||||| | || |||| |||||||| Sbjct: 902 atggagatgctgttggggatgcccctggccgtgagcccctcggcctggcccgtgtggtcg 843 Query: 207 gaggtgttggggtaaagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 266 |||||||||||||| |||||||||||||| ||||| ||||| ||| |||||||||||||| Sbjct: 842 gaggtgttggggtagagcagcatgtaggggaacttggccggcccggtgcggttcttgagc 783 Query: 267 tccgggtcatggttcatgcccaccacct 294 |||||| ||||||| ||||||||| Sbjct: 782 cgcgggtccccgttcatggccaccacct 755
>gb|AF271894.1|AF271894 Zea mays lipoxygenase (LOX) mRNA, complete cds Length = 2845 Score = 105 bits (53), Expect = 1e-19 Identities = 104/121 (85%) Strand = Plus / Minus Query: 145 aaatggaaatgctgtcggggatgcccttggcggtaagcccggcagcggcgcccttgtggt 204 ||||||| ||||||| || |||||||||||||| | ||||| ||| ||||||| || Sbjct: 2620 aaatggagatgctgtttggaatgcccttggcggtgatgccggcggcgtcgcccttcgtgt 2561 Query: 205 cggaggtgttggggtaaagcagcatgtagggaaacttagccgggccgttgcggttcttga 264 |||||||||||||||| |||||| ||||||| |||| |||||||||||||||||||||| Sbjct: 2560 cggaggtgttggggtagagcagcgtgtaggggaactcggccgggccgttgcggttcttga 2501 Query: 265 g 265 | Sbjct: 2500 g 2500
>ref|XM_469655.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2613 Score = 103 bits (52), Expect = 4e-19 Identities = 172/212 (81%) Strand = Plus / Minus Query: 147 atggaaatgctgtcggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 206 ||||| ||||||| |||||||||| |||||| || ||||||||| |||||||| ||||| Sbjct: 2609 atggagatgctgttggggatgcccctggcggagaggccggcagcgtcgcccttgaggtcg 2550 Query: 207 gaggtgttggggtaaagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 266 |||||||| ||||| |||||| ||||||| || || | ||| ||| ||||||||| | Sbjct: 2549 gaggtgtttgggtagagcagcgtgtaggggaaattggtcggcccgacacggttcttgcgg 2490 Query: 267 tccgggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaac 326 | ||||| | ||||||| | || || ||||||||||||| |||||| ||| |||| Sbjct: 2489 tgggggtccttgttcatggcgacgacgcggctctcgatctccgtcagccgcgcgccgaac 2430 Query: 327 cgcttgaacacctccagggcctttgggtccga 358 ||||||||| ||||||| ||||| | |||||| Sbjct: 2429 cgcttgaacgcctccagcgccttggcgtccga 2398
>emb|X64396.1|OSLRNA O.sativa mRNA for lipoxygenase L-2 Length = 2830 Score = 103 bits (52), Expect = 4e-19 Identities = 172/212 (81%) Strand = Plus / Minus Query: 147 atggaaatgctgtcggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 206 ||||| ||||||| |||||||||| |||||| || ||||||||| |||||||| ||||| Sbjct: 2691 atggagatgctgttggggatgcccctggcggagaggccggcagcgtcgcccttgaggtcg 2632 Query: 207 gaggtgttggggtaaagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 266 |||||||| ||||| |||||| ||||||| || || | ||| ||| ||||||||| | Sbjct: 2631 gaggtgtttgggtagagcagcgtgtaggggaaattggtcggcccgacacggttcttgcgg 2572 Query: 267 tccgggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaac 326 | ||||| | ||||||| | || || ||||||||||||| |||||| ||| |||| Sbjct: 2571 tgggggtccttgttcatggcgacgacgcggctctcgatctccgtcagccgcgcgccgaac 2512 Query: 327 cgcttgaacacctccagggcctttgggtccga 358 ||||||||| ||||||| ||||| | |||||| Sbjct: 2511 cgcttgaacgcctccagcgccttggcgtccga 2480
>gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genomic sequence, complete sequence Length = 155106 Score = 103 bits (52), Expect = 4e-19 Identities = 172/212 (81%) Strand = Plus / Plus Query: 147 atggaaatgctgtcggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 206 ||||| ||||||| |||||||||| |||||| || ||||||||| |||||||| ||||| Sbjct: 81306 atggagatgctgttggggatgcccctggcggagaggccggcagcgtcgcccttgaggtcg 81365 Query: 207 gaggtgttggggtaaagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 266 |||||||| ||||| |||||| ||||||| || || | ||| ||| ||||||||| | Sbjct: 81366 gaggtgtttgggtagagcagcgtgtaggggaaattggtcggcccgacacggttcttgcgg 81425 Query: 267 tccgggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaac 326 | ||||| | ||||||| | || || ||||||||||||| |||||| ||| |||| Sbjct: 81426 tgggggtccttgttcatggcgacgacgcggctctcgatctccgtcagccgcgcgccgaac 81485 Query: 327 cgcttgaacacctccagggcctttgggtccga 358 ||||||||| ||||||| ||||| | |||||| Sbjct: 81486 cgcttgaacgcctccagcgccttggcgtccga 81517
>dbj|AK073529.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046E17, full insert sequence Length = 2928 Score = 103 bits (52), Expect = 4e-19 Identities = 172/212 (81%) Strand = Plus / Minus Query: 147 atggaaatgctgtcggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 206 ||||| ||||||| |||||||||| |||||| || ||||||||| |||||||| ||||| Sbjct: 2724 atggagatgctgttggggatgcccctggcggagaggccggcagcgtcgcccttgaggtcg 2665 Query: 207 gaggtgttggggtaaagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 266 |||||||| ||||| |||||| ||||||| || || | ||| ||| ||||||||| | Sbjct: 2664 gaggtgtttgggtagagcagcgtgtaggggaaattggtcggcccgacacggttcttgcgg 2605 Query: 267 tccgggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaac 326 | ||||| | ||||||| | || || ||||||||||||| |||||| ||| |||| Sbjct: 2604 tgggggtccttgttcatggcgacgacgcggctctcgatctccgtcagccgcgcgccgaac 2545 Query: 327 cgcttgaacacctccagggcctttgggtccga 358 ||||||||| ||||||| ||||| | |||||| Sbjct: 2544 cgcttgaacgcctccagcgccttggcgtccga 2513
>gb|DQ428248.1| Sorghum propinquum locus PRC0271 genomic sequence Length = 810 Score = 93.7 bits (47), Expect = 4e-16 Identities = 101/119 (84%) Strand = Plus / Minus Query: 147 atggaaatgctgtcggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 206 ||||| ||||||| || |||||||||||||| | ||||| || |||| || | |||| Sbjct: 792 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 733 Query: 207 gaggtgttggggtaaagcagcatgtagggaaacttagccgggccgttgcggttcttgag 265 |||||||||||||| |||||| ||||||| ||||| ||||| ||||||||||||||||| Sbjct: 732 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 674
>gb|DQ428247.1| Sorghum bicolor voucher PI585454 locus PRC0271 genomic sequence Length = 805 Score = 93.7 bits (47), Expect = 4e-16 Identities = 101/119 (84%) Strand = Plus / Minus Query: 147 atggaaatgctgtcggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 206 ||||| ||||||| || |||||||||||||| | ||||| || |||| || | |||| Sbjct: 787 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 728 Query: 207 gaggtgttggggtaaagcagcatgtagggaaacttagccgggccgttgcggttcttgag 265 |||||||||||||| |||||| ||||||| ||||| ||||| ||||||||||||||||| Sbjct: 727 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 669
>gb|DQ428246.1| Sorghum bicolor voucher PI267539 locus PRC0271 genomic sequence Length = 805 Score = 93.7 bits (47), Expect = 4e-16 Identities = 101/119 (84%) Strand = Plus / Minus Query: 147 atggaaatgctgtcggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 206 ||||| ||||||| || |||||||||||||| | ||||| || |||| || | |||| Sbjct: 787 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 728 Query: 207 gaggtgttggggtaaagcagcatgtagggaaacttagccgggccgttgcggttcttgag 265 |||||||||||||| |||||| ||||||| ||||| ||||| ||||||||||||||||| Sbjct: 727 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 669
>gb|DQ428245.1| Sorghum bicolor voucher PI267408 locus PRC0271 genomic sequence Length = 805 Score = 93.7 bits (47), Expect = 4e-16 Identities = 101/119 (84%) Strand = Plus / Minus Query: 147 atggaaatgctgtcggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 206 ||||| ||||||| || |||||||||||||| | ||||| || |||| || | |||| Sbjct: 787 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 728 Query: 207 gaggtgttggggtaaagcagcatgtagggaaacttagccgggccgttgcggttcttgag 265 |||||||||||||| |||||| ||||||| ||||| ||||| ||||||||||||||||| Sbjct: 727 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 669
>gb|DQ428244.1| Sorghum bicolor voucher PI221607 locus PRC0271 genomic sequence Length = 805 Score = 93.7 bits (47), Expect = 4e-16 Identities = 101/119 (84%) Strand = Plus / Minus Query: 147 atggaaatgctgtcggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 206 ||||| ||||||| || |||||||||||||| | ||||| || |||| || | |||| Sbjct: 787 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 728 Query: 207 gaggtgttggggtaaagcagcatgtagggaaacttagccgggccgttgcggttcttgag 265 |||||||||||||| |||||| ||||||| ||||| ||||| ||||||||||||||||| Sbjct: 727 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 669
>gb|DQ428243.1| Sorghum bicolor voucher PI152702 locus PRC0271 genomic sequence Length = 805 Score = 93.7 bits (47), Expect = 4e-16 Identities = 101/119 (84%) Strand = Plus / Minus Query: 147 atggaaatgctgtcggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 206 ||||| ||||||| || |||||||||||||| | ||||| || |||| || | |||| Sbjct: 787 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 728 Query: 207 gaggtgttggggtaaagcagcatgtagggaaacttagccgggccgttgcggttcttgag 265 |||||||||||||| |||||| ||||||| ||||| ||||| ||||||||||||||||| Sbjct: 727 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 669
>gb|DQ428242.1| Sorghum bicolor voucher NSL92371 locus PRC0271 genomic sequence Length = 805 Score = 93.7 bits (47), Expect = 4e-16 Identities = 101/119 (84%) Strand = Plus / Minus Query: 147 atggaaatgctgtcggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 206 ||||| ||||||| || |||||||||||||| | ||||| || |||| || | |||| Sbjct: 787 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 728 Query: 207 gaggtgttggggtaaagcagcatgtagggaaacttagccgggccgttgcggttcttgag 265 |||||||||||||| |||||| ||||||| ||||| ||||| ||||||||||||||||| Sbjct: 727 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 669
>gb|DQ428241.1| Sorghum bicolor voucher NSL87902 locus PRC0271 genomic sequence Length = 805 Score = 93.7 bits (47), Expect = 4e-16 Identities = 101/119 (84%) Strand = Plus / Minus Query: 147 atggaaatgctgtcggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 206 ||||| ||||||| || |||||||||||||| | ||||| || |||| || | |||| Sbjct: 787 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 728 Query: 207 gaggtgttggggtaaagcagcatgtagggaaacttagccgggccgttgcggttcttgag 265 |||||||||||||| |||||| ||||||| ||||| ||||| ||||||||||||||||| Sbjct: 727 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 669
>gb|DQ428240.1| Sorghum bicolor voucher NSL87666 locus PRC0271 genomic sequence Length = 805 Score = 93.7 bits (47), Expect = 4e-16 Identities = 101/119 (84%) Strand = Plus / Minus Query: 147 atggaaatgctgtcggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 206 ||||| ||||||| || |||||||||||||| | ||||| || |||| || | |||| Sbjct: 787 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 728 Query: 207 gaggtgttggggtaaagcagcatgtagggaaacttagccgggccgttgcggttcttgag 265 |||||||||||||| |||||| ||||||| ||||| ||||| ||||||||||||||||| Sbjct: 727 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 669
>gb|DQ428239.1| Sorghum bicolor voucher NSL77217 locus PRC0271 genomic sequence Length = 805 Score = 93.7 bits (47), Expect = 4e-16 Identities = 101/119 (84%) Strand = Plus / Minus Query: 147 atggaaatgctgtcggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 206 ||||| ||||||| || |||||||||||||| | ||||| || |||| || | |||| Sbjct: 787 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 728 Query: 207 gaggtgttggggtaaagcagcatgtagggaaacttagccgggccgttgcggttcttgag 265 |||||||||||||| |||||| ||||||| ||||| ||||| ||||||||||||||||| Sbjct: 727 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 669
>gb|DQ428238.1| Sorghum bicolor voucher NSL77034 locus PRC0271 genomic sequence Length = 805 Score = 93.7 bits (47), Expect = 4e-16 Identities = 101/119 (84%) Strand = Plus / Minus Query: 147 atggaaatgctgtcggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 206 ||||| ||||||| || |||||||||||||| | ||||| || |||| || | |||| Sbjct: 787 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 728 Query: 207 gaggtgttggggtaaagcagcatgtagggaaacttagccgggccgttgcggttcttgag 265 |||||||||||||| |||||| ||||||| ||||| ||||| ||||||||||||||||| Sbjct: 727 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 669
>gb|DQ428237.1| Sorghum bicolor voucher NSL55243 locus PRC0271 genomic sequence Length = 805 Score = 93.7 bits (47), Expect = 4e-16 Identities = 101/119 (84%) Strand = Plus / Minus Query: 147 atggaaatgctgtcggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 206 ||||| ||||||| || |||||||||||||| | ||||| || |||| || | |||| Sbjct: 787 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 728 Query: 207 gaggtgttggggtaaagcagcatgtagggaaacttagccgggccgttgcggttcttgag 265 |||||||||||||| |||||| ||||||| ||||| ||||| ||||||||||||||||| Sbjct: 727 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 669
>gb|DQ428236.1| Sorghum bicolor voucher NSL51365 locus PRC0271 genomic sequence Length = 805 Score = 93.7 bits (47), Expect = 4e-16 Identities = 101/119 (84%) Strand = Plus / Minus Query: 147 atggaaatgctgtcggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 206 ||||| ||||||| || |||||||||||||| | ||||| || |||| || | |||| Sbjct: 787 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 728 Query: 207 gaggtgttggggtaaagcagcatgtagggaaacttagccgggccgttgcggttcttgag 265 |||||||||||||| |||||| ||||||| ||||| ||||| ||||||||||||||||| Sbjct: 727 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 669
>gb|DQ428235.1| Sorghum bicolor voucher NSL51030 locus PRC0271 genomic sequence Length = 805 Score = 93.7 bits (47), Expect = 4e-16 Identities = 101/119 (84%) Strand = Plus / Minus Query: 147 atggaaatgctgtcggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 206 ||||| ||||||| || |||||||||||||| | ||||| || |||| || | |||| Sbjct: 787 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 728 Query: 207 gaggtgttggggtaaagcagcatgtagggaaacttagccgggccgttgcggttcttgag 265 |||||||||||||| |||||| ||||||| ||||| ||||| ||||||||||||||||| Sbjct: 727 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 669
>gb|DQ428234.1| Sorghum bicolor voucher BTx623 locus PRC0271 genomic sequence Length = 805 Score = 93.7 bits (47), Expect = 4e-16 Identities = 101/119 (84%) Strand = Plus / Minus Query: 147 atggaaatgctgtcggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 206 ||||| ||||||| || |||||||||||||| | ||||| || |||| || | |||| Sbjct: 787 atggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgtcg 728 Query: 207 gaggtgttggggtaaagcagcatgtagggaaacttagccgggccgttgcggttcttgag 265 |||||||||||||| |||||| ||||||| ||||| ||||| ||||||||||||||||| Sbjct: 727 gaggtgttggggtagagcagcgtgtaggggaacttggccggcccgttgcggttcttgag 669
>gb|L37358.1|BLYLOXC Hordeum vulgare lipoxygenase 2 (LoxC) mRNA, complete cds Length = 2910 Score = 87.7 bits (44), Expect = 2e-14 Identities = 131/160 (81%) Strand = Plus / Minus Query: 199 tgtggtcggaggtgttggggtaaagcagcatgtagggaaacttagccgggccgttgcggt 258 |||||||||||||||| ||||| ||||||||||| || ||||| ||||| ||| |||||| Sbjct: 2602 tgtggtcggaggtgtttgggtagagcagcatgtatgggaacttggccggcccggtgcggt 2543 Query: 259 tcttgagctccgggtcatggttcatgcccaccaccttgctctcgatctccaccagccggt 318 |||| |||| |||||| ||||||| ||||||||| ||||||| || ||||| Sbjct: 2542 tctttagctgcgggtccgagttcatggccaccacctgcttctcgatgccctccagcttcg 2483 Query: 319 cgctgaaccgcttgaacacctccagggcctttgggtccga 358 | | ||||||||||||| ||||||| ||||| | |||||| Sbjct: 2482 ccccgaaccgcttgaacgcctccagcgccttggcgtccga 2443
>gb|L37359.1|BLYLOXB Hordeum vulgare lipoxygenase (LoxB) mRNA, complete cds Length = 3003 Score = 65.9 bits (33), Expect = 8e-08 Identities = 120/149 (80%) Strand = Plus / Minus Query: 210 gtgttggggtaaagcagcatgtagggaaacttagccgggccgttgcggttcttgagctcc 269 ||||||||||| |||||||||||||| | ||| | || ||||| |||||||||||| || Sbjct: 2694 gtgttggggtacagcagcatgtagggcatcttcacgggcccgttccggttcttgagcgcc 2635 Query: 270 gggtcatggttcatgcccaccaccttgctctcgatctccaccagccggtcgctgaaccgc 329 ||||| | ||||||| | | | | |||||||||||||||||||| || ||||| | Sbjct: 2634 gggtccttgttcatgtcgaggatccgcttctcgatctccaccagccggctgccgaacctc 2575 Query: 330 ttgaacacctccagggcctttgggtccga 358 |||||| |||| || ||||| | |||||| Sbjct: 2574 ttgaacgcctcgagcgccttggcgtccga 2546
>ref|XM_469412.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2686 Score = 50.1 bits (25), Expect = 0.005 Identities = 49/57 (85%) Strand = Plus / Minus Query: 210 gtgttggggtaaagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 266 ||||||||||| ||||||||||| || | ||| |||| ||||| |||||||||||| Sbjct: 2376 gtgttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagc 2320 Score = 42.1 bits (21), Expect = 1.2 Identities = 51/61 (83%) Strand = Plus / Minus Query: 298 tctcgatctccaccagccggtcgctgaaccgcttgaacacctccagggcctttgggtccg 357 ||||||| |||||||||||| || ||||| ||||||| | ||||| ||||| | ||||| Sbjct: 2288 tctcgatatccaccagccggctgccgaacctcttgaacgcgtccagcgccttggcgtccg 2229 Query: 358 a 358 | Sbjct: 2228 a 2228
>ref|XM_469411.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3165 Score = 50.1 bits (25), Expect = 0.005 Identities = 49/57 (85%) Strand = Plus / Minus Query: 210 gtgttggggtaaagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 266 ||||||||||| ||||||||||| || | ||| |||| ||||| |||||||||||| Sbjct: 2855 gtgttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagc 2799 Score = 42.1 bits (21), Expect = 1.2 Identities = 51/61 (83%) Strand = Plus / Minus Query: 298 tctcgatctccaccagccggtcgctgaaccgcttgaacacctccagggcctttgggtccg 357 ||||||| |||||||||||| || ||||| ||||||| | ||||| ||||| | ||||| Sbjct: 2767 tctcgatatccaccagccggctgccgaacctcttgaacgcgtccagcgccttggcgtccg 2708 Query: 358 a 358 | Sbjct: 2707 a 2707
>gb|DQ389164.1| Oryza sativa (japonica cultivar-group) dual positional specificity lipoxygenase mRNA, complete cds Length = 3154 Score = 50.1 bits (25), Expect = 0.005 Identities = 49/57 (85%) Strand = Plus / Minus Query: 210 gtgttggggtaaagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 266 ||||||||||| ||||||||||| || | ||| |||| ||||| |||||||||||| Sbjct: 2849 gtgttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagc 2793
>dbj|AK105792.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-H08, full insert sequence Length = 1560 Score = 50.1 bits (25), Expect = 0.005 Identities = 49/57 (85%) Strand = Plus / Minus Query: 210 gtgttggggtaaagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 266 ||||||||||| ||||||||||| || | ||| |||| ||||| |||||||||||| Sbjct: 1262 gtgttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagc 1206 Score = 42.1 bits (21), Expect = 1.2 Identities = 51/61 (83%) Strand = Plus / Minus Query: 298 tctcgatctccaccagccggtcgctgaaccgcttgaacacctccagggcctttgggtccg 357 ||||||| |||||||||||| || ||||| ||||||| | ||||| ||||| | ||||| Sbjct: 1174 tctcgatatccaccagccggctgccgaacctcttgaacgcgtccagcgccttggcgtccg 1115 Query: 358 a 358 | Sbjct: 1114 a 1114
>dbj|AK072869.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143O17, full insert sequence Length = 2851 Score = 50.1 bits (25), Expect = 0.005 Identities = 49/57 (85%) Strand = Plus / Minus Query: 210 gtgttggggtaaagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 266 ||||||||||| ||||||||||| || | ||| |||| ||||| |||||||||||| Sbjct: 2527 gtgttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagc 2471 Score = 42.1 bits (21), Expect = 1.2 Identities = 51/61 (83%) Strand = Plus / Minus Query: 298 tctcgatctccaccagccggtcgctgaaccgcttgaacacctccagggcctttgggtccg 357 ||||||| |||||||||||| || ||||| ||||||| | ||||| ||||| | ||||| Sbjct: 2439 tctcgatatccaccagccggctgccgaacctcttgaacgcgtccagcgccttggcgtccg 2380 Query: 358 a 358 | Sbjct: 2379 a 2379
>dbj|AK072689.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143H13, full insert sequence Length = 3167 Score = 50.1 bits (25), Expect = 0.005 Identities = 49/57 (85%) Strand = Plus / Minus Query: 210 gtgttggggtaaagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 266 ||||||||||| ||||||||||| || | ||| |||| ||||| |||||||||||| Sbjct: 2857 gtgttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagc 2801 Score = 42.1 bits (21), Expect = 1.2 Identities = 51/61 (83%) Strand = Plus / Minus Query: 298 tctcgatctccaccagccggtcgctgaaccgcttgaacacctccagggcctttgggtccg 357 ||||||| |||||||||||| || ||||| ||||||| | ||||| ||||| | ||||| Sbjct: 2769 tctcgatatccaccagccggctgccgaacctcttgaacgcgtccagcgccttggcgtccg 2710 Query: 358 a 358 | Sbjct: 2709 a 2709
>dbj|AK071121.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079P11, full insert sequence Length = 1726 Score = 50.1 bits (25), Expect = 0.005 Identities = 49/57 (85%) Strand = Plus / Minus Query: 210 gtgttggggtaaagcagcatgtagggaaacttagccgggccgttgcggttcttgagc 266 ||||||||||| ||||||||||| || | ||| |||| ||||| |||||||||||| Sbjct: 1427 gtgttggggtacagcagcatgtacggcatcttcaccggcccgttccggttcttgagc 1371 Score = 42.1 bits (21), Expect = 1.2 Identities = 51/61 (83%) Strand = Plus / Minus Query: 298 tctcgatctccaccagccggtcgctgaaccgcttgaacacctccagggcctttgggtccg 357 ||||||| |||||||||||| || ||||| ||||||| | ||||| ||||| | ||||| Sbjct: 1339 tctcgatatccaccagccggctgccgaacctcttgaacgcgtccagcgccttggcgtccg 1280 Query: 358 a 358 | Sbjct: 1279 a 1279
>ref|XM_469401.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2726 Score = 42.1 bits (21), Expect = 1.2 Identities = 81/101 (80%) Strand = Plus / Minus Query: 255 cggttcttgagctccgggtcatggttcatgcccaccaccttgctctcgatctccaccagc 314 |||||||||||| ||||| | ||||||| || ||| |||||||| |||||||||||| Sbjct: 2480 cggttcttgagcagggggtccttgttcatgttcaacactttgctctcaatctccaccagc 2421 Query: 315 cggtcgctgaaccgcttgaacacctccagggcctttgggtc 355 | |||||||| |||||| | ||||| ||||| ||||| Sbjct: 2420 tgcctgctgaacctcttgaatgcttccagtgccttggggtc 2380
>emb|CR339058.11| Zebrafish DNA sequence from clone CH211-135H16 in linkage group 23, complete sequence Length = 110857 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 331 tgaacacctccagggcctttg 351 ||||||||||||||||||||| Sbjct: 41562 tgaacacctccagggcctttg 41542
>emb|BX548074.9| Zebrafish DNA sequence from clone CH211-11F6 in linkage group 23, complete sequence Length = 167014 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 331 tgaacacctccagggcctttg 351 ||||||||||||||||||||| Sbjct: 98945 tgaacacctccagggcctttg 98925
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 203 gtcggaggtgttggggtaaagcagcatgtaggg 235 |||||||||||||||| | |||||| ||||||| Sbjct: 1892951 gtcggaggtgttgggggacagcagcgtgtaggg 1892983
>dbj|AP003526.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0548D03 Length = 156709 Score = 42.1 bits (21), Expect = 1.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 203 gtcggaggtgttggggtaaagcagcatgtaggg 235 |||||||||||||||| | |||||| ||||||| Sbjct: 21731 gtcggaggtgttgggggacagcagcgtgtaggg 21763
>dbj|AP004234.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0001H02 Length = 147160 Score = 42.1 bits (21), Expect = 1.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 203 gtcggaggtgttggggtaaagcagcatgtaggg 235 |||||||||||||||| | |||||| ||||||| Sbjct: 93429 gtcggaggtgttgggggacagcagcgtgtaggg 93461
>dbj|AB099850.1| Oryza sativa (japonica cultivar-group) r9-LOX1 mRNA for 9-lipoxigenase, complete cds Length = 2988 Score = 42.1 bits (21), Expect = 1.2 Identities = 81/101 (80%) Strand = Plus / Minus Query: 255 cggttcttgagctccgggtcatggttcatgcccaccaccttgctctcgatctccaccagc 314 |||||||||||| ||||| | ||||||| || ||| |||||||| |||||||||||| Sbjct: 2546 cggttcttgagcagggggtccttgttcatgttcaacactttgctctcaatctccaccagc 2487 Query: 315 cggtcgctgaaccgcttgaacacctccagggcctttgggtc 355 | |||||||| |||||| | ||||| ||||| ||||| Sbjct: 2486 tgcctgctgaacctcttgaatgcttccagtgccttggggtc 2446
>dbj|AK103565.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132L12, full insert sequence Length = 2830 Score = 42.1 bits (21), Expect = 1.2 Identities = 81/101 (80%) Strand = Plus / Minus Query: 255 cggttcttgagctccgggtcatggttcatgcccaccaccttgctctcgatctccaccagc 314 |||||||||||| ||||| | ||||||| || ||| |||||||| |||||||||||| Sbjct: 2554 cggttcttgagcagggggtccttgttcatgttcaacactttgctctcaatctccaccagc 2495 Query: 315 cggtcgctgaaccgcttgaacacctccagggcctttgggtc 355 | |||||||| |||||| | ||||| ||||| ||||| Sbjct: 2494 tgcctgctgaacctcttgaatgcttccagtgccttggggtc 2454
>gb|U32428.1|TAU32428 Triticum aestivum lipoxygenase mRNA, partial cds Length = 1814 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 147 atggaaatgctgtcggggatgcccttggc 175 ||||| ||||||| ||||||||||||||| Sbjct: 1552 atggagatgctgttggggatgcccttggc 1524 Score = 40.1 bits (20), Expect = 4.8 Identities = 47/56 (83%) Strand = Plus / Minus Query: 210 gtgttggggtaaagcagcatgtagggaaacttagccgggccgttgcggttcttgag 265 ||||||||||| || ||||||||||| || || || || || || ||||||||||| Sbjct: 1486 gtgttggggtagagtagcatgtaggggaattttgctggcccattccggttcttgag 1431
>gb|AC101684.13| Mus musculus chromosome 1, clone RP23-187I13, complete sequence Length = 227440 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 gtactggcacagacacacac 70 |||||||||||||||||||| Sbjct: 69288 gtactggcacagacacacac 69307
>emb|AL954222.1| Pan troglodytes chromosome 22 clone q21.2, complete sequence Length = 208827 Score = 40.1 bits (20), Expect = 4.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 284 gcccaccaccttgctctcgatctccaccagcc 315 |||||||||||||||| | || |||||||||| Sbjct: 200815 gcccaccaccttgctccccatgtccaccagcc 200784
>gb|AC087893.15| Homo sapiens 12 BAC RP11-423G4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 207829 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 ttaaattaaatggaaatgct 157 |||||||||||||||||||| Sbjct: 136709 ttaaattaaatggaaatgct 136728
>emb|AL163278.2|HS21C078 Homo sapiens chromosome 21 segment HS21C078 Length = 340000 Score = 40.1 bits (20), Expect = 4.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 284 gcccaccaccttgctctcgatctccaccagcc 315 |||||||||||||||| | || |||||||||| Sbjct: 205921 gcccaccaccttgctccccatgtccaccagcc 205890
>emb|AL078613.10|HSA354I12 Human DNA sequence from clone RP11-354I12 on chromosome 22 Contains an STS and GSSs, complete sequence Length = 60837 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 cacagacacacactacacca 77 |||||||||||||||||||| Sbjct: 58806 cacagacacacactacacca 58825
>emb|AL645973.8| Mouse DNA sequence from clone RP23-287B6 on chromosome 11 Contains a pseudogene similar to part of ribosomal protein S2 (Rps2), a mitchondrial ribosomal protein S7 (Rpms7, MRP-S7) (Mrps7) pseudogene, a pseudogene similar to part of a novel protein, a novel gene and a eukaryotic translation initiation factor pseudogene, complete sequence Length = 196006 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 ttcttgagctccgggtcatg 277 |||||||||||||||||||| Sbjct: 51161 ttcttgagctccgggtcatg 51142
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 gccgggccgttgcggttctt 262 |||||||||||||||||||| Sbjct: 440838 gccgggccgttgcggttctt 440857
>gb|AF064858.2|AF064858 Homo sapiens chromosome 21 clone BAC 28F9, map 21q22.3, complete sequence Length = 194769 Score = 40.1 bits (20), Expect = 4.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 284 gcccaccaccttgctctcgatctccaccagcc 315 |||||||||||||||| | || |||||||||| Sbjct: 93205 gcccaccaccttgctccccatgtccaccagcc 93174
>gb|AY111869.1| Zea mays CL452_-8 mRNA sequence Length = 568 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 tctcgatctccaccagccgg 317 |||||||||||||||||||| Sbjct: 209 tctcgatctccaccagccgg 190
>emb|AL954223.1| Pan troglodytes chromosome 22 clone PTB-187O16 map q21.2, complete sequence Length = 165877 Score = 40.1 bits (20), Expect = 4.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 284 gcccaccaccttgctctcgatctccaccagcc 315 |||||||||||||||| | || |||||||||| Sbjct: 63036 gcccaccaccttgctccccatgtccaccagcc 63005
>emb|AL954813.14| Mouse DNA sequence from clone RP24-541E15 on chromosome 4, complete sequence Length = 140383 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 cacagacacacactacacca 77 |||||||||||||||||||| Sbjct: 40251 cacagacacacactacacca 40232 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,249,729 Number of Sequences: 3902068 Number of extensions: 3249729 Number of successful extensions: 65122 Number of sequences better than 10.0: 62 Number of HSP's better than 10.0 without gapping: 64 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 64897 Number of HSP's gapped (non-prelim): 210 length of query: 358 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 336 effective length of database: 17,147,199,772 effective search space: 5761459123392 effective search space used: 5761459123392 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)