>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 77/85 (90%), Gaps = 2/85 (2%)
 Strand = Plus / Plus

                                                                            
Query: 407      attagcttggttccggcgggaccaatctgaggctgcgcatccactcgca-aagctagggt 465
                ||||||||||||| || || |||||| |||||||||||||||||||||| || ||| |||
Sbjct: 12241407 attagcttggttcaggtggaaccaatttgaggctgcgcatccactcgcagaaactatggt 12241466

                                         
Query: 466      catc-aagtggatgaagctgctctt 489
                |||| ||||||||||||||||||||
Sbjct: 12241467 catcaaagtggatgaagctgctctt 12241491

>dbj|AP002953.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0426D06
          Length = 162173

 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 77/85 (90%), Gaps = 2/85 (2%)
 Strand = Plus / Plus

                                                                         
Query: 407   attagcttggttccggcgggaccaatctgaggctgcgcatccactcgca-aagctagggt 465
             ||||||||||||| || || |||||| |||||||||||||||||||||| || ||| |||
Sbjct: 66033 attagcttggttcaggtggaaccaatttgaggctgcgcatccactcgcagaaactatggt 66092

                                      
Query: 466   catc-aagtggatgaagctgctctt 489
             |||| ||||||||||||||||||||
Sbjct: 66093 catcaaagtggatgaagctgctctt 66117

>dbj|AK070488.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049C21, full
            insert sequence
          Length = 3487

 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 77/85 (90%), Gaps = 2/85 (2%)
 Strand = Plus / Minus

                                                                        
Query: 407  attagcttggttccggcgggaccaatctgaggctgcgcatccactcgca-aagctagggt 465
            ||||||||||||| || || |||||| |||||||||||||||||||||| || ||| |||
Sbjct: 3097 attagcttggttcaggtggaaccaatttgaggctgcgcatccactcgcagaaactatggt 3038

                                     
Query: 466  catc-aagtggatgaagctgctctt 489
            |||| ||||||||||||||||||||
Sbjct: 3037 catcaaagtggatgaagctgctctt 3013

>dbj|AK059365.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-E05, full
           insert sequence
          Length = 1104

 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 77/85 (90%), Gaps = 2/85 (2%)
 Strand = Plus / Minus

                                                                       
Query: 407 attagcttggttccggcgggaccaatctgaggctgcgcatccactcgca-aagctagggt 465
           ||||||||||||| || || |||||| |||||||||||||||||||||| || ||| |||
Sbjct: 833 attagcttggttcaggtggaaccaatttgaggctgcgcatccactcgcagaaactatggt 774

                                    
Query: 466 catc-aagtggatgaagctgctctt 489
           |||| ||||||||||||||||||||
Sbjct: 773 catcaaagtggatgaagctgctctt 749

>ref|NM_183780.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2598

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 76/84 (90%), Gaps = 2/84 (2%)
 Strand = Plus / Minus

                                                                        
Query: 408  ttagcttggttccggcgggaccaatctgaggctgcgcatccactcgca-aagctagggtc 466
            |||||||||||| || || |||||| |||||||||||||||||||||| || ||| ||||
Sbjct: 2598 ttagcttggttcaggtggaaccaatttgaggctgcgcatccactcgcagaaactatggtc 2539

                                    
Query: 467  atc-aagtggatgaagctgctctt 489
            ||| ||||||||||||||||||||
Sbjct: 2538 atcaaagtggatgaagctgctctt 2515

>gb|AY107083.1| Zea mays PCO077197 mRNA sequence
          Length = 1384

 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 75/84 (89%), Gaps = 2/84 (2%)
 Strand = Plus / Minus

                                                                        
Query: 408  ttagcttggttccggcgggaccaatctgaggctgcgcatccactcgc-aaagctagggtc 466
            |||||||||||| || ||||||||| ||||||||||||||||||||| ||| |||  |||
Sbjct: 1004 ttagcttggttctggtgggaccaatttgaggctgcgcatccactcgcaaaaactatagtc 945

                                    
Query: 467  atc-aagtggatgaagctgctctt 489
            ||| || |||||||||||||||||
Sbjct: 944  atcgaactggatgaagctgctctt 921

>dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete genome
          Length = 452528

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 34/34 (100%)
 Strand = Plus / Minus

                                                
Query: 224    gtaaaaaagaagtccctttctcatttgcttcctg 257
              ||||||||||||||||||||||||||||||||||
Sbjct: 367453 gtaaaaaagaagtccctttctcatttgcttcctg 367420

>emb|Y15605.1|DMAMY3 Drosophila miranda Amy3 eroded gene
          Length = 1239

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 194 aataatcaggtaatattataca 215
           ||||||||||||||||||||||
Sbjct: 179 aataatcaggtaatattataca 200

>emb|Y15604.1|DMAMY2 Drosophila miranda Amy2 gene
          Length = 2327

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 194 aataatcaggtaatattataca 215
           ||||||||||||||||||||||
Sbjct: 204 aataatcaggtaatattataca 225

>gb|AC099730.2| Homo sapiens chromosome 11, clone RP11-48F13, complete sequence
          Length = 169549

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 316   caaacctttcagatttctttt 336
             |||||||||||||||||||||
Sbjct: 48640 caaacctttcagatttctttt 48620

>gb|AC091146.8| Homo sapiens chromosome 11, clone RP11-884J20, complete sequence
          Length = 138053

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 316   caaacctttcagatttctttt 336
             |||||||||||||||||||||
Sbjct: 66034 caaacctttcagatttctttt 66054

>gb|AE000661.1|HUAE000661 Homo sapiens T-cell receptor alpha delta locus from bases 752679 to
             1000555 (section 4 of 5) of the Complete Nucleotide
             Sequence
          Length = 247877

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 96    cttcaaaggcaggagaaagt 115
             ||||||||||||||||||||
Sbjct: 50679 cttcaaaggcaggagaaagt 50660

>gb|AY587764.1| Homo sapiens opioid receptor, mu 1 (OPRM1) gene, complete cds
          Length = 83889

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 131   tgtgtaaaattctgtgtgcc 150
             ||||||||||||||||||||
Sbjct: 68302 tgtgtaaaattctgtgtgcc 68283

>emb|Z70783.1|CEZK856 Caenorhabditis elegans Cosmid ZK856, complete sequence
          Length = 41502

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 316   caaacctttcagatttcttt 335
             ||||||||||||||||||||
Sbjct: 25469 caaacctttcagatttcttt 25450

>emb|Z99772.1|CEH05L14 Caenorhabditis elegans Fosmid H05L14, complete sequence
          Length = 19636

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 198   atcaggtaatattatacagcttcg 221
             ||||||||||||||||| ||||||
Sbjct: 10975 atcaggtaatattatactgcttcg 10998

>emb|AL445589.6| Human DNA sequence from clone RP11-303K20 on chromosome 20 Contains
            part of the SPTLC2L gene for serine palmitoyltransferase
            long chain base subunit 2-like (aminotransferase 2),
            complete sequence
          Length = 36292

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 180  accacgtcagagaaaataat 199
            ||||||||||||||||||||
Sbjct: 2502 accacgtcagagaaaataat 2521

>emb|AL132774.20|HSDJ402L9 Human DNA sequence from clone RP3-402L9 on chromosome 6q25-26.1
            Contains the 3' end of the OPRM1 gene for opiate
            receptor, mu 1 (MOR-1) and the 3' end of the gene for
            phosphoinositide-binding protein PIP3-E (KIAA0403),
            complete sequence
          Length = 98104

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 131  tgtgtaaaattctgtgtgcc 150
            ||||||||||||||||||||
Sbjct: 2806 tgtgtaaaattctgtgtgcc 2787

>gb|AC104864.6| Homo sapiens chromosome 8, clone RP11-324E17, complete sequence
          Length = 168786

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 194    aataatcaggtaatattata 213
              ||||||||||||||||||||
Sbjct: 143498 aataatcaggtaatattata 143517

>gb|AC108211.3| Homo sapiens BAC clone RP11-511I14 from 4, complete sequence
          Length = 222457

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 236   tccctttctcatttgcttcctgca 259
             ||||||||||||||||| ||||||
Sbjct: 11513 tccctttctcatttgctgcctgca 11536

>gb|AC159995.4| Mus musculus chromosome 1, clone RP24-81G13, complete sequence
          Length = 204097

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 54     aatggccaagccagacttgt 73
              ||||||||||||||||||||
Sbjct: 127310 aatggccaagccagacttgt 127329

>dbj|AB017622.1| Grus japonensis mitochondrial DNA, D-loop region, isolate:GJCB37
          Length = 1165

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 71 tgtattatgtggcatataac 90
          ||||||||||||||||||||
Sbjct: 78 tgtattatgtggcatataac 59

>dbj|AB017621.1| Grus japonensis mitochondrial DNA, D-loop region,
          isolate:GJCB8-32
          Length = 1165

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 71 tgtattatgtggcatataac 90
          ||||||||||||||||||||
Sbjct: 78 tgtattatgtggcatataac 59

>dbj|AB017620.1| Grus japonensis mitochondrial DNA, D-loop region, isolate:GJKL4
          Length = 1165

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 71 tgtattatgtggcatataac 90
          ||||||||||||||||||||
Sbjct: 78 tgtattatgtggcatataac 59

>dbj|AB017619.1| Grus japonensis mitochondrial DNA, D-loop region,
          isolate:GJKL5-19
          Length = 1165

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 71 tgtattatgtggcatataac 90
          ||||||||||||||||||||
Sbjct: 78 tgtattatgtggcatataac 59

>dbj|AB017618.1| Grus japonensis mitochondrial genes for NADH dehydrogenase subunit
           6, 12S rRNA, tRNA-glu, tRNA-Phe and D-loop, partial and
           complete sequence, isolate:GJKL5-RNA
          Length = 1535

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 71  tgtattatgtggcatataac 90
           ||||||||||||||||||||
Sbjct: 305 tgtattatgtggcatataac 286

>gb|AC102163.14| Mus musculus chromosome 1, clone RP23-431N20, complete sequence
          Length = 218665

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 54    aatggccaagccagacttgt 73
             ||||||||||||||||||||
Sbjct: 48640 aatggccaagccagacttgt 48659

>dbj|AB018119.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MSN2
          Length = 62927

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 185   gtcagagaaaataatcaggtaata 208
             |||||||||||||||||| |||||
Sbjct: 28060 gtcagagaaaataatcagttaata 28037

>ref|NG_001332.1| Homo sapiens T cell receptor alpha delta locus (TCRA/TCRD) on chromosome
              14
          Length = 1071646

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 96     cttcaaaggcaggagaaagt 115
              ||||||||||||||||||||
Sbjct: 803357 cttcaaaggcaggagaaagt 803338

>emb|AL845462.6| Mouse DNA sequence from clone RP23-236D15 on chromosome 2, complete
             sequence
          Length = 190994

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    aggagtaaaaggaatcaaat 52
             ||||||||||||||||||||
Sbjct: 84467 aggagtaaaaggaatcaaat 84448

>gb|AC124325.10| Mus musculus chromosome 7, clone RP24-462O14, complete sequence
          Length = 137613

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 190   agaaaataatcaggtaatat 209
             ||||||||||||||||||||
Sbjct: 76116 agaaaataatcaggtaatat 76097


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,535,943
Number of Sequences: 3902068
Number of extensions: 5535943
Number of successful extensions: 101535
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 101440
Number of HSP's gapped (non-prelim): 89
length of query: 490
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 468
effective length of database: 17,147,199,772
effective search space: 8024889493296
effective search space used: 8024889493296
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)