Clone Name | rbastl26f05 |
---|---|
Clone Library Name | barley_pub |
>YB53_YEAST (P38308) Protein YBR203W| Length = 924 Score = 29.6 bits (65), Expect = 1.9 Identities = 25/75 (33%), Positives = 34/75 (45%) Frame = +1 Query: 4 SSLQHVEQFVTSGIICLETSTNKYMAIVLKLKSIYNNICIKENYEILLTDDQTAAHGHAH 183 +S V QFVTS + L Y+ VL L + I +++ + DD H H Sbjct: 236 TSTYRVAQFVTS--LRLHPDNGAYVK-VLDLSHLKPGIIGQDSKDSQGLDDD--GHSRRH 290 Query: 184 TRRIERSTQLSYNVP 228 RR RST S N+P Sbjct: 291 RRRRRRSTNTSLNLP 305
>ARI2_CAEEL (Q22431) Probable protein ariadne-2 (Ari-2)| Length = 482 Score = 29.3 bits (64), Expect = 2.5 Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 4/58 (6%) Frame = +1 Query: 16 HVEQFVTSGII----CLETSTNKYMAIVLKLKSIYNNICIKENYEILLTDDQTAAHGH 177 HVE ++ G+ C+E+ Y L I N+ IK YE L D +H H Sbjct: 157 HVESRLSEGVASRIECMESECEVYAPSEFVLSIIKNSPVIKLKYERFLLRDMVNSHPH 214
>YOD1_SCHPO (Q9UUD8) Probable peptidase C18A7.01 (EC 3.4.-.-)| Length = 451 Score = 27.7 bits (60), Expect = 7.3 Identities = 15/67 (22%), Positives = 34/67 (50%) Frame = +1 Query: 4 SSLQHVEQFVTSGIICLETSTNKYMAIVLKLKSIYNNICIKENYEILLTDDQTAAHGHAH 183 ++++ V+ + GI T K +A V+ + +Y + ++E+ +L + HG Sbjct: 239 AAIRSVQPCIKPGI------TEKELAEVINMLFVYGGLPVQESPIVLFGERAAMPHGGPS 292 Query: 184 TRRIERS 204 RR+++S Sbjct: 293 NRRLKKS 299
>HIS7_ERWCT (Q6D409) Histidine biosynthesis bifunctional protein hisB| [Includes: Histidinol-phosphatase (EC 3.1.3.15); Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) (IGPD)] Length = 355 Score = 27.7 bits (60), Expect = 7.3 Identities = 11/27 (40%), Positives = 15/27 (55%) Frame = +1 Query: 145 LTDDQTAAHGHAHTRRIERSTQLSYNV 225 +TD T + HAH R+ R T + NV Sbjct: 158 ITDQLTKRNRHAHVNRVTRETAIDVNV 184
>GLUP_HELPY (O25788) Putative glucose/galactose transporter| Length = 407 Score = 27.3 bits (59), Expect = 9.5 Identities = 10/32 (31%), Positives = 21/32 (65%) Frame = +1 Query: 31 VTSGIICLETSTNKYMAIVLKLKSIYNNICIK 126 + SGI+CL+T+ N ++ ++ K K N + ++ Sbjct: 109 LASGIVCLQTAGNPFVTLLSKGKEARNLVLVQ 140
>GLUP_HELPJ (Q9ZK41) Putative glucose/galactose transporter| Length = 407 Score = 27.3 bits (59), Expect = 9.5 Identities = 10/32 (31%), Positives = 21/32 (65%) Frame = +1 Query: 31 VTSGIICLETSTNKYMAIVLKLKSIYNNICIK 126 + SGI+CL+T+ N ++ ++ K K N + ++ Sbjct: 109 LASGIVCLQTAGNPFVTLLSKGKEARNLVLVQ 140
>RBCC1_HUMAN (Q8TDY2) RB1-inducible coiled-coil protein 1| Length = 1594 Score = 27.3 bits (59), Expect = 9.5 Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Frame = +1 Query: 52 LETSTNKYMAIVLKLKSIYNNICIK-ENYEILLTDDQTAAHGHAHTRRIERSTQLSY 219 LE +N Y ++ K +SIY+N E+ ++ LT TA A +E T+ SY Sbjct: 157 LEDCSNSYQKLLFKFESIYSNYLQSIEDIKLKLTHLGTAVSVMAKIPLLECLTRHSY 213 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 42,469,810 Number of Sequences: 219361 Number of extensions: 679281 Number of successful extensions: 1365 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 1352 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1365 length of database: 80,573,946 effective HSP length: 92 effective length of database: 60,392,734 effective search space used: 1449425616 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)