ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbastl26f04 |
|---|---|
| Clone Library Name | barley_pub |
>SYV_RAT (Q04462) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 1264 Score = 41.2 bits (95), Expect = 6e-04 Identities = 23/54 (42%), Positives = 29/54 (53%) Frame = -1 Query: 412 KLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEA 251 KL+ KR E Q+ L ++ ASGY K P VQE D KL +LR + EA Sbjct: 1203 KLQAKRSEAQRQAQRLQERRAASGYSAKVPLEVQEADEVKLQQTEAELRKVDEA 1256
>SYV_HUMAN (P26640) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) (Protein G7a) Length = 1264 Score = 39.7 bits (91), Expect = 0.002 Identities = 23/54 (42%), Positives = 29/54 (53%) Frame = -1 Query: 412 KLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEA 251 KL+ KR E Q+ L ++ ASGY K P VQE D KL +LR + EA Sbjct: 1203 KLQAKRVEAQRQAQRLRERRAASGYPVKVPLEVQEADEAKLQQTEAELRKVDEA 1256
>SYV_FUGRU (P49696) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 1217 Score = 39.7 bits (91), Expect = 0.002 Identities = 20/54 (37%), Positives = 30/54 (55%) Frame = -1 Query: 412 KLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEA 251 KL K+ +++K LS+K+ Y+EK P VQE+D KL +L + EA Sbjct: 1156 KLMGKKTDLEKQIEKLSEKISKGDYKEKVPVKVQEQDTEKLRQSQTELEKVKEA 1209
>SYV_MOUSE (Q9Z1Q9) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) (Protein G7a) Length = 1263 Score = 39.7 bits (91), Expect = 0.002 Identities = 22/54 (40%), Positives = 28/54 (51%) Frame = -1 Query: 412 KLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEA 251 KL+ KR E Q+ L ++ AS Y K P VQE D KL +LR + EA Sbjct: 1202 KLQAKRSEAQRQAQRLQERRAASSYSAKVPLEVQEADEAKLQQTEAELRKVDEA 1255
>SYV_ARATH (P93736) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 1108 Score = 38.5 bits (88), Expect = 0.004 Identities = 18/60 (30%), Positives = 31/60 (51%) Frame = -1 Query: 412 KLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAEKKLDA 233 K+R K E+QK + L + M S Y EK P +++E++ KL ++ + +L A Sbjct: 1041 KIRNKIGELQKQKEKLQKMMSVSTYEEKVPANIKEDNANKLAKILQEFDFFEKESARLAA 1100
>SYV_ACIAD (Q6F8F0) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 971 Score = 36.6 bits (83), Expect = 0.015 Identities = 19/60 (31%), Positives = 35/60 (58%) Frame = -1 Query: 412 KLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAEKKLDA 233 +L+K D++QK ++ K+ G+ KAP +V E + KL F +QL I ++ +++ A Sbjct: 911 RLQKDLDKVQKQHDQIASKLANEGFVAKAPAAVVEGEKVKLAEFADQLVKIKQSMEQIAA 970
>SYV_CARHZ (Q3AF87) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 878 Score = 33.9 bits (76), Expect = 0.094 Identities = 18/51 (35%), Positives = 30/51 (58%) Frame = -1 Query: 412 KLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVI 260 +L+K EI++L +QK+ G+ KAP V ++ KLTAF+ + V+ Sbjct: 821 ELKKVLAEIERL----NQKLNNPGFLAKAPAEVVNKEREKLTAFYREKEVL 867
>SYV_NEIMB (Q9K1H7) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 945 Score = 33.5 bits (75), Expect = 0.12 Identities = 17/58 (29%), Positives = 30/58 (51%) Frame = -1 Query: 412 KLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAEKKL 239 +L K+ +++QK L+ K+ GY EKAP + E+D L +++ + KL Sbjct: 886 RLSKEAEKLQKALDKLNAKLSKPGYTEKAPAHLVEKDKADLAELEDKMAKVQNQLAKL 943
>SYV_NEIMA (Q9JX22) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 945 Score = 33.5 bits (75), Expect = 0.12 Identities = 17/58 (29%), Positives = 30/58 (51%) Frame = -1 Query: 412 KLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAEKKL 239 +L K+ +++QK L+ K+ GY EKAP + E+D L +++ + KL Sbjct: 886 RLSKEAEKLQKALDKLNAKLSKPGYTEKAPAHLVEKDKADLAELEDKMAKVQTQLSKL 943
>SYV_NEIG1 (Q5F5W0) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 945 Score = 33.5 bits (75), Expect = 0.12 Identities = 17/58 (29%), Positives = 30/58 (51%) Frame = -1 Query: 412 KLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAEKKL 239 +L K+ +++QK L+ K+ GY EKAP + E+D L +++ + KL Sbjct: 886 RLSKEAEKLQKALDKLNAKLSKPGYTEKAPAHLVEKDKADLAELEDKMAKVQNQLAKL 943
>SYV_PELCD (Q3A253) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 899 Score = 32.7 bits (73), Expect = 0.21 Identities = 18/60 (30%), Positives = 34/60 (56%) Frame = -1 Query: 412 KLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAEKKLDA 233 +L K+ +++K S+K+ + KAP +V E+D +KL E+L ++ + +KL A Sbjct: 838 RLNKEIAKVEKDVLMFSKKLSNESFLAKAPAAVLEKDRQKLADAEEKLSILKQGLEKLAA 897
>HLYB_TREHY (Q54316) Hemolysin B| Length = 828 Score = 29.6 bits (65), Expect(2) = 0.25 Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 4/59 (6%) Frame = -1 Query: 403 KKRDEIQKLQHALSQKME-ASGYREKAPPSVQEEDMRKLTAFFEQL---RVIGEAEKKL 239 K RDEI LQ LS+K E REK ++E+D+R + + + R++ K+L Sbjct: 450 KIRDEITSLQEELSKKEEKCREEREKIETFIEEDDIRHVISEITNIPIKRLLNSESKRL 508 Score = 21.6 bits (44), Expect(2) = 0.25 Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 3/38 (7%) Frame = -3 Query: 212 VGSLFLLGPTGI---FVWKLILHLFFADGGDVTFIENS 108 +GS LGPTG+ + K++ F D + I+ S Sbjct: 547 LGSFIFLGPTGVGKTALAKVLSEFMFGDSDALIRIDMS 584
>SYV_CHRVO (Q7NUM8) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 939 Score = 32.3 bits (72), Expect = 0.27 Identities = 16/51 (31%), Positives = 29/51 (56%) Frame = -1 Query: 412 KLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVI 260 +LRK++ +++ L+ K+E GY +KAP + E D +L ++L I Sbjct: 881 RLRKEQGKVEAELAKLTAKLEKPGYVDKAPAHLVERDKAQLAELNDKLEKI 931
>SYV_THETH (P96142) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 862 Score = 32.3 bits (72), Expect = 0.27 Identities = 18/51 (35%), Positives = 26/51 (50%) Frame = -1 Query: 403 KKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEA 251 K+ E+ L +K+ + G+REKAP V E + +L EQ I EA Sbjct: 807 KRLKELLALAERSQRKLASPGFREKAPKEVVEAEEARLKENLEQAERIREA 857
>SYV_THET8 (Q5SJ45) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 862 Score = 32.3 bits (72), Expect = 0.27 Identities = 18/51 (35%), Positives = 26/51 (50%) Frame = -1 Query: 403 KKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEA 251 K+ E+ L +K+ + G+REKAP V E + +L EQ I EA Sbjct: 807 KRLKELLALAERSQRKLASPGFREKAPKEVVEAEEARLKENLEQAERIREA 857
>SYV_THET2 (Q72JG7) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 862 Score = 32.3 bits (72), Expect = 0.27 Identities = 18/51 (35%), Positives = 26/51 (50%) Frame = -1 Query: 403 KKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEA 251 K+ E+ L +K+ + G+REKAP V E + +L EQ I EA Sbjct: 807 KRLKELLALAERSQRKLASPGFREKAPKEVVEAEEARLRENLEQAERIREA 857
>SYV_BACHD (Q9K8G8) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 880 Score = 32.0 bits (71), Expect = 0.36 Identities = 15/58 (25%), Positives = 31/58 (53%) Frame = -1 Query: 412 KLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAEKKL 239 +L K+ ++++K + +K+ G+ KAP V EE+ +K + E+ + K+L Sbjct: 821 RLEKEENKLEKEVERVQKKLSNQGFLAKAPEKVIEEERKKEADYLEKRAAVRARIKEL 878
>MYH11_MOUSE (O08638) Myosin-11 (Myosin heavy chain, smooth muscle isoform)| (SMMHC) Length = 1972 Score = 30.4 bits (67), Expect = 1.0 Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 3/61 (4%) Frame = -1 Query: 412 KLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQ---EEDMRKLTAFFEQLRVIGEAEKK 242 KLR+ DE LQ L ++MEA E+ ++ + +KL F + V+ E +K+ Sbjct: 1337 KLRQLEDERNSLQDQLDEEMEAKQNLERHVSTLNIQLSDSKKKLQDFASTIEVMEEGKKR 1396 Query: 241 L 239 L Sbjct: 1397 L 1397
>SYV_GEOKA (Q5KWL3) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 880 Score = 30.4 bits (67), Expect = 1.0 Identities = 15/51 (29%), Positives = 26/51 (50%) Frame = -1 Query: 412 KLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVI 260 +L K+ D+ K + +K+ G+ KAP V EE+ RK + E+ + Sbjct: 821 RLEKELDKWNKEVERVEKKLANEGFLAKAPAHVVEEERRKRQDYIEKREAV 871
>SYV_BACST (P11931) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 880 Score = 30.4 bits (67), Expect = 1.0 Identities = 15/51 (29%), Positives = 26/51 (50%) Frame = -1 Query: 412 KLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVI 260 +L K+ D+ K + +K+ G+ KAP V EE+ RK + E+ + Sbjct: 821 RLEKELDKWNKEVERVEKKLANEGFLAKAPAHVVEEERRKRQDYIEKREAV 871
>SYV_BACSK (Q5WEQ4) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 880 Score = 29.6 bits (65), Expect = 1.8 Identities = 16/60 (26%), Positives = 30/60 (50%) Frame = -1 Query: 412 KLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAEKKLDA 233 +L K+ D++ K + +K+ G+ KAP V EE+ K + + + + E +L A Sbjct: 821 RLEKELDKLNKEVERIEKKLNNQGFLAKAPSHVVEEEKAKQQDYAAKRQTVIERIAELKA 880
>SYV_THEMA (Q9X2D7) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 865 Score = 29.6 bits (65), Expect = 1.8 Identities = 17/48 (35%), Positives = 26/48 (54%) Frame = -1 Query: 412 KLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQL 269 +L++ ++IQK L +K+ + EKAP V EE KL E+L Sbjct: 807 RLKQIMEKIQKEIDRLEKKLANKDFVEKAPEEVVEETKEKLNTNRERL 854
>SYV_BACLD (Q65GK8) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 880 Score = 29.3 bits (64), Expect = 2.3 Identities = 13/40 (32%), Positives = 24/40 (60%) Frame = -1 Query: 412 KLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRK 293 +L+K+ D++ K + +K+ G+ +KAP V EE+ K Sbjct: 821 RLQKELDKLTKEVERVQKKLSNEGFMKKAPAHVIEEERAK 860
>SYV_PASMU (Q9CMK5) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 954 Score = 28.9 bits (63), Expect = 3.0 Identities = 15/60 (25%), Positives = 34/60 (56%) Frame = -1 Query: 412 KLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAEKKLDA 233 ++ K + EIQ++++ L+ + + KAPP+V E++ K+ + E L + + ++A Sbjct: 898 EIEKYQGEIQRIENKLANE----AFVAKAPPAVIEKERAKMAEYAEGLNKLKQQYLAIEA 953
>SYV_PSEPK (Q88P76) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 948 Score = 28.9 bits (63), Expect = 3.0 Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = -1 Query: 412 KLRKKRDEIQKLQHALSQ---KMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAEKK 242 +L + EIQ+LQ + + K+ + + +KAPP+V E++ KL + L E + Sbjct: 885 ELARLNKEIQRLQGEVQRVGGKLSNTAFVDKAPPAVIEKERAKLAESEQALANFTEQHAR 944 Query: 241 LDA 233 + A Sbjct: 945 IAA 947
>SYV_OCEIH (Q8EPN2) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 883 Score = 28.5 bits (62), Expect = 4.0 Identities = 16/40 (40%), Positives = 24/40 (60%) Frame = -1 Query: 412 KLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRK 293 +L K E++++Q LS + G+ KAP SV EE+ RK Sbjct: 829 ELAKWTKEVERVQKKLSNQ----GFVSKAPESVVEEEKRK 864
>MYH6_MESAU (P13539) Myosin heavy chain, cardiac muscle alpha isoform| (MyHC-alpha) Length = 1939 Score = 28.1 bits (61), Expect = 5.2 Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%) Frame = -1 Query: 403 KKRDEIQKLQHALS-QKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAEKKL 239 K E++K++ L +KME E+A S++ E+ + L A E ++ E E+KL Sbjct: 1523 KNVHELEKVRKQLEVEKMELQSALEEAEASLEHEEGKILRAQLEFNQIKAEIERKL 1578
>UBIE_BRUME (Q8YDE4) Ubiquinone/menaquinone biosynthesis methyltransferase ubiE| (EC 2.1.1.-) Length = 269 Score = 28.1 bits (61), Expect = 5.2 Identities = 13/35 (37%), Positives = 22/35 (62%) Frame = +2 Query: 269 QLLEKGGELPHVLLLDTGGSLLSVTGRFHLLRQGM 373 +++E G HV +LD GS+L V GR +++G+ Sbjct: 98 RIVEASGRQAHVTILDINGSMLGV-GRERAIKKGL 131
>SYV_PSEU2 (Q4ZXI0) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 948 Score = 28.1 bits (61), Expect = 5.2 Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 3/61 (4%) Frame = -1 Query: 412 KLRKKRDEIQKLQHALSQ---KMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAEKK 242 +L + EIQ+LQ + + K+ + + +KAPP V ++ KLT + L + E + Sbjct: 885 ELARLDKEIQRLQGEVQRVGGKLSNAAFVDKAPPEVIAKERAKLTEAEQALGKLAEQHAR 944 Query: 241 L 239 + Sbjct: 945 I 945
>SYV_PSESM (Q887M3) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 948 Score = 28.1 bits (61), Expect = 5.2 Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 3/61 (4%) Frame = -1 Query: 412 KLRKKRDEIQKLQHALSQ---KMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAEKK 242 +L + EIQ+LQ + + K+ + + +KAPP V ++ KLT + L + E + Sbjct: 885 ELARLDKEIQRLQGEVQRVGGKLSNAAFVDKAPPDVIAKERAKLTEAEQALGKLAEQHAR 944 Query: 241 L 239 + Sbjct: 945 I 945
>SYV_PSE14 (Q48MF2) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 948 Score = 28.1 bits (61), Expect = 5.2 Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 3/61 (4%) Frame = -1 Query: 412 KLRKKRDEIQKLQHALSQ---KMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAEKK 242 +L + EIQ+LQ + + K+ + + +KAPP V ++ KLT + L + E + Sbjct: 885 ELARLDKEIQRLQGEVQRVGGKLSNAAFVDKAPPEVIAKERAKLTEAEQALGKLAEQHAR 944 Query: 241 L 239 + Sbjct: 945 I 945
>MYH7_MESAU (P13540) Myosin heavy chain, cardiac muscle beta isoform (MyHC-beta)| Length = 1934 Score = 28.1 bits (61), Expect = 5.2 Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%) Frame = -1 Query: 403 KKRDEIQKLQHAL-SQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAEKKL 239 K E++K++ L ++KME E+A S++ E+ L A E ++ E E+KL Sbjct: 1520 KSIHELEKIRKQLEAEKMELQSALEEAEASLEHEEGNILRAQLEFNQIKAEIERKL 1575
>MYH7_HUMAN (P12883) Myosin heavy chain, cardiac muscle beta isoform (MyHC-beta)| Length = 1935 Score = 28.1 bits (61), Expect = 5.2 Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 1/52 (1%) Frame = -1 Query: 391 EIQKLQHAL-SQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAEKKL 239 E++K++ L ++KME E+A S++ E+ + L A E ++ E E+KL Sbjct: 1525 ELEKVRKQLEAEKMELQSALEEAEASLEHEEGKILRAQLEFNQIKAEIERKL 1576
>CD2AP_HUMAN (Q9Y5K6) CD2-associated protein (Cas ligand with multiple SH3| domains) (Adapter protein CMS) Length = 639 Score = 28.1 bits (61), Expect = 5.2 Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 3/64 (4%) Frame = +2 Query: 140 PQKKGAVSTSKQKYQ*VPI---ETESRLKSTARLRI*FLLSLTDDPQLLEKGGELPHVLL 310 P+K + + K Q V I +TE ++K+ R F T++ +L K GE+ H++ Sbjct: 241 PEKPLILQSLGPKTQSVEITKTDTEGKIKAKEYCRTLFAYEGTNEDELTFKEGEIIHLIS 300 Query: 311 LDTG 322 +TG Sbjct: 301 KETG 304
>INCE_CHICK (P53352) Inner centromere protein| Length = 877 Score = 28.1 bits (61), Expect = 5.2 Identities = 18/58 (31%), Positives = 30/58 (51%) Frame = -1 Query: 406 RKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAEKKLDA 233 R+++DE + Q AL Q+ E ++E +EE+ + EQ + E EK+L A Sbjct: 606 RRRQDEEARKQKALQQEEEERRHKELMQKK-KEEEQERARKIAEQRQAEQEREKQLAA 662
>Y4417_BACTN (Q89ZG0) UPF0144 protein BT_4417| Length = 511 Score = 28.1 bits (61), Expect = 5.2 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 6/51 (11%) Frame = -1 Query: 403 KKRDEIQKLQHALSQKMEA-SGY-----REKAPPSVQEEDMRKLTAFFEQL 269 KK++E+ KLQH +K+EA SG +E+ S++EE + +F + Sbjct: 119 KKKEELDKLQHQEIEKLEAISGLSADEAKERLVESLKEEAKTQAQSFINDI 169
>UBIE_BRUSU (Q8FUZ3) Ubiquinone/menaquinone biosynthesis methyltransferase ubiE| (EC 2.1.1.-) Length = 269 Score = 27.7 bits (60), Expect = 6.8 Identities = 13/35 (37%), Positives = 22/35 (62%) Frame = +2 Query: 269 QLLEKGGELPHVLLLDTGGSLLSVTGRFHLLRQGM 373 +++E G HV +LD GS+L V GR +++G+ Sbjct: 98 RIVEVSGRQAHVTILDINGSMLGV-GRERAIKKGL 131
>DJLA_SHEON (Q8EB99) DnaJ-like protein djlA| Length = 262 Score = 27.7 bits (60), Expect = 6.8 Identities = 13/34 (38%), Positives = 20/34 (58%) Frame = -1 Query: 343 GYREKAPPSVQEEDMRKLTAFFEQLRVIGEAEKK 242 G+ KA V E D+R T +Q+R+ G+A K+ Sbjct: 65 GHVAKASGRVTETDIRIATLLMDQMRLTGDARKE 98
>MYH7_RAT (P02564) Myosin heavy chain, cardiac muscle beta isoform (MyHC-beta)| Length = 1935 Score = 27.7 bits (60), Expect = 6.8 Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 1/56 (1%) Frame = -1 Query: 403 KKRDEIQKLQHAL-SQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAEKKL 239 K E++K++ L ++K+E E+A S++ E+ + L A E ++ E E+KL Sbjct: 1521 KSIHELEKIRKQLEAEKLELQSALEEAEASLEHEEGKILRAQLEFNQIKAEIERKL 1576
>GATD_METAC (Q8TR66) Glutamyl-tRNA(Gln) amidotransferase subunit D (EC 6.3.5.-)| (Glu-ADT subunit D) Length = 424 Score = 27.7 bits (60), Expect = 6.8 Identities = 11/27 (40%), Positives = 19/27 (70%) Frame = +2 Query: 257 TDDPQLLEKGGELPHVLLLDTGGSLLS 337 T++ +L E G +LP + +L TGG++ S Sbjct: 71 TNEEELPEPGKKLPKIAILSTGGTIAS 97
>PALM_CHICK (Q9YGL6) Paralemmin| Length = 386 Score = 27.7 bits (60), Expect = 6.8 Identities = 14/37 (37%), Positives = 20/37 (54%) Frame = -1 Query: 412 KLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEED 302 K R+ D+ ++LQH S+ + E AP S EED Sbjct: 30 KRRQLEDDRRQLQHLKSKALRERWLLEGAPSSASEED 66
>FAEB_NEUCR (Q9HGR3) Feruloyl esterase B precursor (EC 3.1.1.73) (Ferulic acid| esterase B) (FAEB) Length = 292 Score = 27.3 bits (59), Expect = 8.8 Identities = 13/32 (40%), Positives = 21/32 (65%), Gaps = 2/32 (6%) Frame = +1 Query: 52 NIIYKRKAI--VRNWSFIVPFEFSINVTSPPS 141 N++Y R A+ ++ WS ++ EFS NV+ PS Sbjct: 220 NLVYPRCAMEALKQWSNVLGVEFSRNVSGVPS 251
>MYH6_RAT (P02563) Myosin heavy chain, cardiac muscle alpha isoform| (MyHC-alpha) Length = 1938 Score = 27.3 bits (59), Expect = 8.8 Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 1/56 (1%) Frame = -1 Query: 403 KKRDEIQKLQHALS-QKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAEKKL 239 K E++K++ L +K+E E+A S++ E+ + L A E ++ E E+KL Sbjct: 1522 KNVHELEKIRKQLEVEKLELQSALEEAEASLEHEEGKILRAQLEFNQIKAEIERKL 1577
>MYH6_MOUSE (Q02566) Myosin heavy chain, cardiac muscle alpha isoform| (MyHC-alpha) Length = 1938 Score = 27.3 bits (59), Expect = 8.8 Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 1/56 (1%) Frame = -1 Query: 403 KKRDEIQKLQHALS-QKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAEKKL 239 K E++K++ L +K+E E+A S++ E+ + L A E ++ E E+KL Sbjct: 1523 KNVHELEKIRKQLEVEKLELQSALEEAEASLEHEEGKILRAQLEFNQIKAEIERKL 1578
>PERQ1_HUMAN (O75420) PERQ amino acid rich with GYF domain protein 1| Length = 817 Score = 27.3 bits (59), Expect = 8.8 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 8/50 (16%) Frame = -1 Query: 385 QKLQHALSQKMEASGYREKA--------PPSVQEEDMRKLTAFFEQLRVI 260 Q LQ S+++ REKA PP ++ ++LTAF +QL+ + Sbjct: 448 QFLQLVSSRQLPQCALREKAALGDLTPPPPPPPQQQQQQLTAFLQQLQAL 497
>GRAP1_MOUSE (Q8VD04) GRIP1-associated protein 1 (GRASP-1) (HCMV-interacting| protein) Length = 806 Score = 27.3 bits (59), Expect = 8.8 Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 1/58 (1%) Frame = -1 Query: 409 LRKKRDEI-QKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAEKKL 239 LR++ E+ +LQH ++ E G ++ +QE +R + EQL+ IG+ +++L Sbjct: 324 LREQTSELASELQHRQAEYEELMGQKDDLNSQLQES-LRANSRLLEQLQEIGQEKEQL 380 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 57,749,752 Number of Sequences: 219361 Number of extensions: 1098247 Number of successful extensions: 3529 Number of sequences better than 10.0: 46 Number of HSP's better than 10.0 without gapping: 3460 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3526 length of database: 80,573,946 effective HSP length: 112 effective length of database: 56,005,514 effective search space used: 1344132336 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
