ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl26f04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_469360.1| Oryza sativa (japonica cultivar-group), mRNA 82 2e-12
2dbj|AK121157.1| Oryza sativa (japonica cultivar-group) cDNA clon... 82 2e-12
3dbj|AK066973.1| Oryza sativa (japonica cultivar-group) cDNA clon... 82 2e-12
4gb|AY109108.1| Zea mays PCO116815 mRNA sequence 76 1e-10
5gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 64 4e-07
6gb|AC137998.2| Oryza sativa chromosome 3 BAC OSJNBa0010B01 genom... 64 4e-07
7dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 64 4e-07
8gb|AC120508.3| Oryza sativa chromosome 3 BAC OSJNBb0021O11 genom... 64 4e-07
9gb|AY112223.1| Zea mays CL3071_1 mRNA sequence 60 6e-06
10gb|BT017806.1| Zea mays clone EL01N0506F04.c mRNA sequence 56 9e-05
11gb|AC121490.2| Oryza sativa (japonica cultivar-group) chromosome... 52 0.001
12dbj|AK100513.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.023
13gb|AC153930.2| Mus musculus 10 BAC RP24-461H14 (Roswell Park Can... 46 0.089
14gb|AC146506.1| Solanum demissum chromosome 5 BAC PGEC989P08 geno... 44 0.35
15gb|AC125496.3| Oryza sativa (japonica cultivar-group) chromosome... 44 0.35
16gb|AY730338.1| Solanum tuberosum strain P6/210 clone BAC BA47f2,... 42 1.4
17ref|XM_537383.2| PREDICTED: Canis familiaris similar to RING fin... 42 1.4
18gb|AC067843.16| Homo sapiens chromosome 8, clone RP11-645E10, co... 42 1.4
19gb|AC023955.11| Homo sapiens chromosome 8, clone RP11-153B5, com... 42 1.4
20dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
21dbj|AP005822.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
22dbj|AP005695.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
23dbj|AP005492.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
24emb|AL670175.12| Mouse DNA sequence from clone RP23-309K20 on ch... 42 1.4
25gb|AC113122.9| Mus musculus chromosome 8, clone RP23-349P4, comp... 40 5.5
26ref|XM_543770.2| PREDICTED: Canis familiaris similar to solute c... 40 5.5
27emb|CR774200.5| Zebrafish DNA sequence from clone CH211-188G24 i... 40 5.5
28emb|AL139149.10| Human DNA sequence from clone RP4-660H19 on chr... 40 5.5
29emb|AL683828.8| Mouse DNA sequence from clone RP23-340H1 on chro... 40 5.5
30emb|AL845501.9| Mouse DNA sequence from clone RP23-194C12 on chr... 40 5.5
31dbj|AB027572.1| Triticum aestivum chloroplast DNA, 21.1-kb fragm... 40 5.5
32gb|AC105426.4| Homo sapiens BAC clone RP11-794N18 from 4, comple... 40 5.5
33ref|NM_079456.2| Drosophila melanogaster Soluble NSF attachment ... 40 5.5
34gb|AC009839.10| Drosophila melanogaster 3L BAC RP98-16G9 (Roswel... 40 5.5
35gb|AC021860.6| Homo sapiens BAC clone RP11-617D20 from 4, comple... 40 5.5
36gb|AC093260.2| Homo sapiens chromosome 5 clone RP11-237B16, comp... 40 5.5
37gb|AC083783.8| Homo sapiens chromosome 17, clone RP11-462C21, co... 40 5.5
38gb|AC092960.3| Homo sapiens 3 BAC RP11-393B14 (Roswell Park Canc... 40 5.5
39gb|AC113368.3| Homo sapiens chromosome 5 clone RP11-116B13, comp... 40 5.5
40ref|XM_228548.3| PREDICTED: Rattus norvegicus similar to hypothe... 40 5.5
41gb|AY069477.1| Drosophila melanogaster LD21601 full insert cDNA 40 5.5
42emb|AL583742.2|CNS07EFV Human chromosome 14 DNA sequence BAC R-3... 40 5.5
43gb|AC134339.6| Mus musculus BAC clone RP23-5F21 from 8, complete... 40 5.5
44gb|AE003514.4| Drosophila melanogaster chromosome 3L, section 71... 40 5.5
45gb|AC005291.1|AC005291 Homo sapiens chromosome 17, clone hRPK.40... 40 5.5
46dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome 40 5.5
47gb|U09374.1|DMU09374 Drosophila melanogaster soluble NSF attachm... 40 5.5
48emb|AL691423.14| Mouse DNA sequence from clone RP23-21D3 on chro... 40 5.5
49emb|AL589870.30| Mouse DNA sequence from clone RP23-118A2 on chr... 40 5.5
50gb|AC024092.19| Homo sapiens 12p BAC RP11-712A21 (Roswell Park C... 40 5.5 
>ref|XM_469360.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3534

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 104/125 (83%)
 Strand = Plus / Minus

                                                                        
Query: 288  gtgagcttcctcatgtcctcctcttggacactggggggagccttctctctgtaaccggac 347
            ||||| || |||||||||||||| |||||| |  | |||||||||||| ||||||| || 
Sbjct: 3092 gtgagttttctcatgtcctcctcctggacattctgtggagccttctctttgtaaccagaa 3033

                                                                        
Query: 348  gcttccatcttctgagacagggcatgctgtaacttttggatttcatccctctttttcctt 407
            |||||||| ||||| ||||| || || || | |||||| ||||| || ||||||||||| 
Sbjct: 3032 gcttccattttctgtgacagtgcgtgttggagcttttgaatttcttctctctttttcctc 2973

                 
Query: 408  agctt 412
            |||||
Sbjct: 2972 agctt 2968
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>dbj|AK121157.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079F18, full
            insert sequence
          Length = 3587

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 104/125 (83%)
 Strand = Plus / Minus

                                                                        
Query: 288  gtgagcttcctcatgtcctcctcttggacactggggggagccttctctctgtaaccggac 347
            ||||| || |||||||||||||| |||||| |  | |||||||||||| ||||||| || 
Sbjct: 3304 gtgagttttctcatgtcctcctcctggacattctgtggagccttctctttgtaaccagaa 3245

                                                                        
Query: 348  gcttccatcttctgagacagggcatgctgtaacttttggatttcatccctctttttcctt 407
            |||||||| ||||| ||||| || || || | |||||| ||||| || ||||||||||| 
Sbjct: 3244 gcttccattttctgtgacagtgcgtgttggagcttttgaatttcttctctctttttcctc 3185

                 
Query: 408  agctt 412
            |||||
Sbjct: 3184 agctt 3180
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>dbj|AK066973.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089D01, full
            insert sequence
          Length = 4411

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 77/89 (86%)
 Strand = Plus / Minus

                                                                        
Query: 324  ggagccttctctctgtaaccggacgcttccatcttctgagacagggcatgctgtaacttt 383
            |||||||||||| | |||||||| |||||||| ||||| || |||||||| || | ||||
Sbjct: 4113 ggagccttctctttataaccggaagcttccattttctgtgatagggcatgttgcagcttt 4054

                                         
Query: 384  tggatttcatccctctttttccttagctt 412
            || ||||| || |||||||||||||||||
Sbjct: 4053 tgaatttcttctctctttttccttagctt 4025
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>gb|AY109108.1| Zea mays PCO116815 mRNA sequence
          Length = 1041

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 83/98 (84%)
 Strand = Plus / Minus

                                                                       
Query: 237 tctagtttcttctcagcctcaccgatgacccgcagttgctcgaaaaaggcggtgagcttc 296
           |||| |||||||||||| |||| |||||||   |||||||| || || ||||||||||||
Sbjct: 801 tctaatttcttctcagcttcactgatgacctctagttgctccaacaaagcggtgagcttc 742

                                                 
Query: 297 ctcatgtcctcctcttggacactggggggagccttctc 334
           |||||||||||||| || || ||  | |||||||||||
Sbjct: 741 ctcatgtcctcctcctgtacgctctgtggagccttctc 704
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                            
Query: 288      gtgagcttcctcatgtcctcctcttggacactggggggagccttctctctgtaaccggac 347
                ||||| || |||||||||||||| |||||| |  | |||||||||||| ||||||| || 
Sbjct: 27542742 gtgagttttctcatgtcctcctcctggacattctgtggagccttctctttgtaaccagaa 27542683

                                    
Query: 348      gcttccatcttctgagacag 367
                |||||||| ||||| |||||
Sbjct: 27542682 gcttccattttctgtgacag 27542663



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                                
Query: 324    ggagccttctctctgtaaccggacgcttccatcttctgagacagggcatg 373
              |||||||||||| | |||||||| |||||||| ||||| || ||||||||
Sbjct: 652074 ggagccttctctttataaccggaagcttccattttctgtgatagggcatg 652025



 Score = 44.1 bits (22), Expect = 0.35
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                  
Query: 379      acttttggatttcatccctctttttccttagctt 412
                ||||||||||| |||| ||||| |||||||||||
Sbjct: 12395975 acttttggattccatctctcttcttccttagctt 12396008



 Score = 44.1 bits (22), Expect = 0.35
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                
Query: 379    acttttggatttcatccctctttttccttagctt 412
              ||||||| ||||| || |||||||||||||||||
Sbjct: 651915 acttttgaatttcttctctctttttccttagctt 651882



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 234      gcatctagtttcttctcagcctcac 258
                |||||||||||||||||||| ||||
Sbjct: 12395727 gcatctagtttcttctcagcttcac 12395751
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>gb|AC137998.2| Oryza sativa chromosome 3 BAC OSJNBa0010B01 genomic sequence, complete
             sequence
          Length = 27470

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 68/80 (85%)
 Strand = Plus / Plus

                                                                         
Query: 288   gtgagcttcctcatgtcctcctcttggacactggggggagccttctctctgtaaccggac 347
             ||||| || |||||||||||||| |||||| |  | |||||||||||| ||||||| || 
Sbjct: 20032 gtgagttttctcatgtcctcctcctggacattctgtggagccttctctttgtaaccagaa 20091

                                 
Query: 348   gcttccatcttctgagacag 367
             |||||||| ||||| |||||
Sbjct: 20092 gcttccattttctgtgacag 20111
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                            
Query: 288      gtgagcttcctcatgtcctcctcttggacactggggggagccttctctctgtaaccggac 347
                ||||| || |||||||||||||| |||||| |  | |||||||||||| ||||||| || 
Sbjct: 27634065 gtgagttttctcatgtcctcctcctggacattctgtggagccttctctttgtaaccagaa 27634006

                                    
Query: 348      gcttccatcttctgagacag 367
                |||||||| ||||| |||||
Sbjct: 27634005 gcttccattttctgtgacag 27633986



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                                
Query: 324    ggagccttctctctgtaaccggacgcttccatcttctgagacagggcatg 373
              |||||||||||| | |||||||| |||||||| ||||| || ||||||||
Sbjct: 652072 ggagccttctctttataaccggaagcttccattttctgtgatagggcatg 652023



 Score = 44.1 bits (22), Expect = 0.35
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                  
Query: 379      acttttggatttcatccctctttttccttagctt 412
                ||||||||||| |||| ||||| |||||||||||
Sbjct: 12392738 acttttggattccatctctcttcttccttagctt 12392771



 Score = 44.1 bits (22), Expect = 0.35
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                
Query: 379    acttttggatttcatccctctttttccttagctt 412
              ||||||| ||||| || |||||||||||||||||
Sbjct: 651913 acttttgaatttcttctctctttttccttagctt 651880



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 234      gcatctagtttcttctcagcctcac 258
                |||||||||||||||||||| ||||
Sbjct: 12392490 gcatctagtttcttctcagcttcac 12392514
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>gb|AC120508.3| Oryza sativa chromosome 3 BAC OSJNBb0021O11 genomic sequence,
            complete sequence
          Length = 123406

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 68/80 (85%)
 Strand = Plus / Plus

                                                                        
Query: 288  gtgagcttcctcatgtcctcctcttggacactggggggagccttctctctgtaaccggac 347
            ||||| || |||||||||||||| |||||| |  | |||||||||||| ||||||| || 
Sbjct: 7772 gtgagttttctcatgtcctcctcctggacattctgtggagccttctctttgtaaccagaa 7831

                                
Query: 348  gcttccatcttctgagacag 367
            |||||||| ||||| |||||
Sbjct: 7832 gcttccattttctgtgacag 7851
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>gb|AY112223.1| Zea mays CL3071_1 mRNA sequence
          Length = 1082

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                       
Query: 237 tctagtttcttctcagcctcaccgatgacccgcagttgctcgaaaaaggcggtgagcttc 296
           |||| |||||||||||| |||| |||||||   ||||| || || || ||||||||||| 
Sbjct: 446 tctaatttcttctcagcttcactgatgacctctagttgttccaacaaagcggtgagcttt 505

                         
Query: 297 ctcatgtcctcctc 310
           ||||||||||||||
Sbjct: 506 ctcatgtcctcctc 519
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>gb|BT017806.1| Zea mays clone EL01N0506F04.c mRNA sequence
          Length = 1244

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 139/176 (78%)
 Strand = Plus / Minus

                                                                       
Query: 237 tctagtttcttctcagcctcaccgatgacccgcagttgctcgaaaaaggcggtgagcttc 296
           |||| |||||||||||| |||| |||||||   ||||| || || || |||| |||||| 
Sbjct: 953 tctaatttcttctcagcttcactgatgacctctagttgttccaacaaagcggggagcttt 894

                                                                       
Query: 297 ctcatgtcctcctcttggacactggggggagccttctctctgtaaccggacgcttccatc 356
           |||||||||||||| || || ||  | ||||||||||| |  || || || || ||||| 
Sbjct: 893 ctcatgtcctcctcctgcacgctctgtggagccttctcgcgatacccagaggcgtccatt 834

                                                                   
Query: 357 ttctgagacagggcatgctgtaacttttggatttcatccctctttttccttagctt 412
           ||||| | ||| ||||  |||| |||||| ||||||||  | || |||||||||||
Sbjct: 833 ttctgtgccagtgcattttgtagcttttgaatttcatcttttttcttccttagctt 778
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>gb|AC121490.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0005F16, complete sequence
          Length = 160053

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                               
Query: 324   ggagccttctctctgtaaccggacgcttccatcttctgagacagggcatg 373
             |||||||||||| | |||||||| |||||||| ||||| || ||||||||
Sbjct: 37955 ggagccttctctttataaccggaagcttccattttctgtgatagggcatg 37906



 Score = 44.1 bits (22), Expect = 0.35
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                               
Query: 379   acttttggatttcatccctctttttccttagctt 412
             ||||||| ||||| || |||||||||||||||||
Sbjct: 37796 acttttgaatttcttctctctttttccttagctt 37763
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>dbj|AK100513.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099P08, full
            insert sequence
          Length = 3639

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                        
Query: 369  gcatgctgtaacttttggatttcatccctctttttccttagctt 412
            ||||| |||| |||||||||| |||| ||||| |||||||||||
Sbjct: 3384 gcatggtgtagcttttggattccatctctcttcttccttagctt 3341



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 234  gcatctagtttcttctcagcctcac 258
            |||||||||||||||||||| ||||
Sbjct: 3519 gcatctagtttcttctcagcttcac 3495
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>gb|AC153930.2| Mus musculus 10 BAC RP24-461H14 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 186915

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 106    tttgaattttctataaatgtgacatca 132
              |||||| ||||||||||||||||||||
Sbjct: 132214 tttgaaatttctataaatgtgacatca 132188
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>gb|AC146506.1| Solanum demissum chromosome 5 BAC PGEC989P08 genomic sequence, complete
             sequence
          Length = 121915

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 104   catttgaattttctataaatgt 125
             ||||||||||||||||||||||
Sbjct: 75708 catttgaattttctataaatgt 75687
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>gb|AC125496.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0098H14, complete sequence
          Length = 132560

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                               
Query: 379   acttttggatttcatccctctttttccttagctt 412
             ||||||||||| |||| ||||| |||||||||||
Sbjct: 54993 acttttggattccatctctcttcttccttagctt 55026



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 234   gcatctagtttcttctcagcctcac 258
             |||||||||||||||||||| ||||
Sbjct: 54745 gcatctagtttcttctcagcttcac 54769
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>gb|AY730338.1| Solanum tuberosum strain P6/210 clone BAC BA47f2, complete sequence
          Length = 81567

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 105   atttgaattttctataaatgt 125
             |||||||||||||||||||||
Sbjct: 74176 atttgaattttctataaatgt 74196
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>ref|XM_537383.2| PREDICTED: Canis familiaris similar to RING finger protein 31 (Zinc
            in-between-RING-finger ubiquitin-associated domain
            protein) (LOC480259), mRNA
          Length = 3490

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 253  cctcaccgatgacccgcagttgctc 277
            ||||||||||||| |||||||||||
Sbjct: 2442 cctcaccgatgacacgcagttgctc 2466
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>gb|AC067843.16| Homo sapiens chromosome 8, clone RP11-645E10, complete sequence
          Length = 187559

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 6     tttcaaagaagttgcttttgaagtg 30
             |||||||||||||| ||||||||||
Sbjct: 28262 tttcaaagaagttggttttgaagtg 28286
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>gb|AC023955.11| Homo sapiens chromosome 8, clone RP11-153B5, complete sequence
          Length = 160905

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 6     tttcaaagaagttgcttttgaagtg 30
             |||||||||||||| ||||||||||
Sbjct: 28763 tttcaaagaagttggttttgaagtg 28787
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 40       cactcacagatcaacatcatt 60
                |||||||||||||||||||||
Sbjct: 18717892 cactcacagatcaacatcatt 18717872



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 159     tatcaacttccaaacaaaaat 179
               |||||||||||||||||||||
Sbjct: 9829802 tatcaacttccaaacaaaaat 9829822
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>dbj|AP005822.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0456E06
          Length = 164353

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 159    tatcaacttccaaacaaaaat 179
              |||||||||||||||||||||
Sbjct: 120044 tatcaacttccaaacaaaaat 120064
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>dbj|AP005695.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0063H02
          Length = 152326

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 159   tatcaacttccaaacaaaaat 179
             |||||||||||||||||||||
Sbjct: 26437 tatcaacttccaaacaaaaat 26457
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>dbj|AP005492.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0077L03
          Length = 171177

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 40    cactcacagatcaacatcatt 60
             |||||||||||||||||||||
Sbjct: 43643 cactcacagatcaacatcatt 43623
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>emb|AL670175.12| Mouse DNA sequence from clone RP23-309K20 on chromosome 4, complete
              sequence
          Length = 168158

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 121    aatgtgacatcaccaccatcc 141
              |||||||||||||||||||||
Sbjct: 140982 aatgtgacatcaccaccatcc 141002
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>gb|AC113122.9| Mus musculus chromosome 8, clone RP23-349P4, complete sequence
          Length = 203728

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 103   ccatttgaattttctataaa 122
             ||||||||||||||||||||
Sbjct: 23208 ccatttgaattttctataaa 23189
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>ref|XM_543770.2| PREDICTED: Canis familiaris similar to solute carrier family 7
            (cationic amino acid transporter, y+ system), member 3
            (LOC486643), mRNA
          Length = 3279

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 371  atgctgtaacttttggattt 390
            ||||||||||||||||||||
Sbjct: 1571 atgctgtaacttttggattt 1590
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>emb|CR774200.5| Zebrafish DNA sequence from clone CH211-188G24 in linkage group 5,
             complete sequence
          Length = 86527

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 162   caacttccaaacaaaaatac 181
             ||||||||||||||||||||
Sbjct: 36971 caacttccaaacaaaaatac 36952
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>emb|AL139149.10| Human DNA sequence from clone RP4-660H19 on chromosome 1p31.1-31.3
             Contains a novel gene, complete sequence
          Length = 21958

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     agtcatttcaaagaagttgc 20
             ||||||||||||||||||||
Sbjct: 17530 agtcatttcaaagaagttgc 17549
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>emb|AL683828.8| Mouse DNA sequence from clone RP23-340H1 on chromosome 4 Contains the
             3' end of the Col27a1 gene for procollagen type XXVII
             alpha 1, the Orm1, Orm2 and Orm3 genes for orosomucoid 1,
             2 and 3, an orosomucoid pseudogene, the gene for a novel
             protein similar to human AT-hook protein AKNA, gene
             4933437N03Rik, the Whrn gene for whirlin and two CpG
             islands, complete sequence
          Length = 214370

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 290   gagcttcctcatgtcctcct 309
             ||||||||||||||||||||
Sbjct: 31754 gagcttcctcatgtcctcct 31735
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>emb|AL845501.9| Mouse DNA sequence from clone RP23-194C12 on chromosome 4 Contains a
             ribosomal protein S18 (Rps18) pseudogene, complete
             sequence
          Length = 156572

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 350   ttccatcttctgagacaggg 369
             ||||||||||||||||||||
Sbjct: 31116 ttccatcttctgagacaggg 31135
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>dbj|AB027572.1| Triticum aestivum chloroplast DNA, 21.1-kb fragment bearing RNA
             polymerase subunit (rpo) genes
          Length = 21245

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 5     atttcaaagaagttgcttttgaagtgga 32
             |||||| ||||||| |||||||||||||
Sbjct: 10920 atttcagagaagtttcttttgaagtgga 10893
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>gb|AC105426.4| Homo sapiens BAC clone RP11-794N18 from 4, complete sequence
          Length = 55775

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 292   gcttcctcatgtcctcctct 311
             ||||||||||||||||||||
Sbjct: 23507 gcttcctcatgtcctcctct 23526
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>ref|NM_079456.2| Drosophila melanogaster Soluble NSF attachment protein CG6625-RA
            (Snap), mRNA
          Length = 2069

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 109  gaattttctataaatgtgac 128
            ||||||||||||||||||||
Sbjct: 1762 gaattttctataaatgtgac 1743
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>gb|AC009839.10| Drosophila melanogaster 3L BAC RP98-16G9 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 185918

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 109    gaattttctataaatgtgac 128
              ||||||||||||||||||||
Sbjct: 106242 gaattttctataaatgtgac 106223
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>gb|AC021860.6| Homo sapiens BAC clone RP11-617D20 from 4, complete sequence
          Length = 148045

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     tttcaaagaagttgcttttg 25
             ||||||||||||||||||||
Sbjct: 52506 tttcaaagaagttgcttttg 52487
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>gb|AC093260.2| Homo sapiens chromosome 5 clone RP11-237B16, complete sequence
          Length = 168521

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 111  attttctataaatgtgacat 130
            ||||||||||||||||||||
Sbjct: 1961 attttctataaatgtgacat 1980
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>gb|AC083783.8| Homo sapiens chromosome 17, clone RP11-462C21, complete sequence
          Length = 143516

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 108    tgaattttctataaatgtga 127
              ||||||||||||||||||||
Sbjct: 121095 tgaattttctataaatgtga 121076
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>gb|AC092960.3| Homo sapiens 3 BAC RP11-393B14 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 172507

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 104    catttgaattttctataaat 123
              ||||||||||||||||||||
Sbjct: 161099 catttgaattttctataaat 161080
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>gb|AC113368.3| Homo sapiens chromosome 5 clone RP11-116B13, complete sequence
          Length = 155354

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 111   attttctataaatgtgacat 130
             ||||||||||||||||||||
Sbjct: 23774 attttctataaatgtgacat 23793
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>ref|XM_228548.3| PREDICTED: Rattus norvegicus similar to hypothetical protein
            6430402L03 (LOC302412), mRNA
          Length = 1632

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 293  cttcctcatgtcctcctctt 312
            ||||||||||||||||||||
Sbjct: 1005 cttcctcatgtcctcctctt 986
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>gb|AY069477.1| Drosophila melanogaster LD21601 full insert cDNA
          Length = 2054

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 109  gaattttctataaatgtgac 128
            ||||||||||||||||||||
Sbjct: 1730 gaattttctataaatgtgac 1711
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>emb|AL583742.2|CNS07EFV Human chromosome 14 DNA sequence BAC R-318A9 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 175584

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 122   atgtgacatcaccaccatcc 141
             ||||||||||||||||||||
Sbjct: 71007 atgtgacatcaccaccatcc 71026
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>gb|AC134339.6| Mus musculus BAC clone RP23-5F21 from 8, complete sequence
          Length = 229073

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 374    ctgtaacttttggatttcat 393
              ||||||||||||||||||||
Sbjct: 161157 ctgtaacttttggatttcat 161138
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>gb|AE003514.4| Drosophila melanogaster chromosome 3L, section 71 of 83 of the complete
              sequence
          Length = 299903

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 109    gaattttctataaatgtgac 128
              ||||||||||||||||||||
Sbjct: 288396 gaattttctataaatgtgac 288377
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>gb|AC005291.1|AC005291 Homo sapiens chromosome 17, clone hRPK.401_O_9, complete sequence
          Length = 198582

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 108   tgaattttctataaatgtga 127
             ||||||||||||||||||||
Sbjct: 63377 tgaattttctataaatgtga 63358
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>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome
          Length = 134545

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 5     atttcaaagaagttgcttttgaagtgga 32
             |||||| ||||||| |||||||||||||
Sbjct: 22274 atttcagagaagtttcttttgaagtgga 22247
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>gb|U09374.1|DMU09374 Drosophila melanogaster soluble NSF attachment protein mRNA, complete
            cds
          Length = 2038

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 109  gaattttctataaatgtgac 128
            ||||||||||||||||||||
Sbjct: 1718 gaattttctataaatgtgac 1699
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>emb|AL691423.14| Mouse DNA sequence from clone RP23-21D3 on chromosome 2, complete
              sequence
          Length = 216415

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 106    tttgaattttctataaatgt 125
              ||||||||||||||||||||
Sbjct: 104442 tttgaattttctataaatgt 104461
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>emb|AL589870.30| Mouse DNA sequence from clone RP23-118A2 on chromosome 2, complete
              sequence
          Length = 202686

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 28     gtggacactcaacactcaca 47
              ||||||||||||||||||||
Sbjct: 191713 gtggacactcaacactcaca 191732
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>gb|AC024092.19| Homo sapiens 12p BAC RP11-712A21 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 171887

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 380   cttttggatttcatccctct 399
             ||||||||||||||||||||
Sbjct: 59407 cttttggatttcatccctct 59388


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,784,721
Number of Sequences: 3902068
Number of extensions: 4784721
Number of successful extensions: 130279
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 129984
Number of HSP's gapped (non-prelim): 294
length of query: 412
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 390
effective length of database: 17,147,199,772
effective search space: 6687407911080
effective search space used: 6687407911080
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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