>ref|NM_187916.1| Oryza sativa (japonica cultivar-group), Ozsa8358 predicted mRNA
          Length = 3594

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 65/71 (91%)
 Strand = Plus / Minus

                                                                        
Query: 345  tcaccaaactgaatgccagtaggaggatgcatgttgaaaacgtaagcgactggtgcagat 404
            ||||||||||||||||||||||||||||||||| | || | |||||| |||||||| |||
Sbjct: 3554 tcaccaaactgaatgccagtaggaggatgcatgctaaagatgtaagcaactggtgctgat 3495

                       
Query: 405  acttgcatccc 415
            |||||||||||
Sbjct: 3494 acttgcatccc 3484

>dbj|AP000570.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              clone:P0711E10
          Length = 157903

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 65/71 (91%)
 Strand = Plus / Plus

                                                                          
Query: 345    tcaccaaactgaatgccagtaggaggatgcatgttgaaaacgtaagcgactggtgcagat 404
              ||||||||||||||||||||||||||||||||| | || | |||||| |||||||| |||
Sbjct: 135201 tcaccaaactgaatgccagtaggaggatgcatgctaaagatgtaagcaactggtgctgat 135260

                         
Query: 405    acttgcatccc 415
              |||||||||||
Sbjct: 135261 acttgcatccc 135271

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 65/71 (91%)
 Strand = Plus / Plus

                                                                           
Query: 345     tcaccaaactgaatgccagtaggaggatgcatgttgaaaacgtaagcgactggtgcagat 404
               ||||||||||||||||||||||||||||||||| | || | |||||| |||||||| |||
Sbjct: 8560048 tcaccaaactgaatgccagtaggaggatgcatgctaaagatgtaagcaactggtgctgat 8560107

                          
Query: 405     acttgcatccc 415
               |||||||||||
Sbjct: 8560108 acttgcatccc 8560118

>dbj|AK111789.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023092H03, full
            insert sequence
          Length = 1817

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 65/71 (91%)
 Strand = Plus / Minus

                                                                        
Query: 345  tcaccaaactgaatgccagtaggaggatgcatgttgaaaacgtaagcgactggtgcagat 404
            ||||||||||||||||||||||||||||||||| | || | |||||| |||||||| |||
Sbjct: 1575 tcaccaaactgaatgccagtaggaggatgcatgctaaagatgtaagcaactggtgctgat 1516

                       
Query: 405  acttgcatccc 415
            |||||||||||
Sbjct: 1515 acttgcatccc 1505

>dbj|AK100311.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078K23, full
            insert sequence
          Length = 3500

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 65/71 (91%)
 Strand = Plus / Minus

                                                                        
Query: 345  tcaccaaactgaatgccagtaggaggatgcatgttgaaaacgtaagcgactggtgcagat 404
            ||||||||||||||||||||||||||||||||| | || | |||||| |||||||| |||
Sbjct: 3077 tcaccaaactgaatgccagtaggaggatgcatgctaaagatgtaagcaactggtgctgat 3018

                       
Query: 405  acttgcatccc 415
            |||||||||||
Sbjct: 3017 acttgcatccc 3007

>gb|AC114786.4| Homo sapiens BAC clone RP11-618I10 from 4, complete sequence
          Length = 148977

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 104  aataaagttaaaatcagttaag 125
            ||||||||||||||||||||||
Sbjct: 4813 aataaagttaaaatcagttaag 4792

>ref|XM_980774.1| PREDICTED: Mus musculus protein tyrosine phosphatase, non-receptor
            type 3 (Ptpn3), mRNA
          Length = 6723

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 303  aactaggctctgcataaggct 323
            |||||||||||||||||||||
Sbjct: 3959 aactaggctctgcataaggct 3979

>ref|XM_485383.4| PREDICTED: Mus musculus protein tyrosine phosphatase, non-receptor
            type 3, transcript variant 1 (Ptpn3), mRNA
          Length = 6723

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 303  aactaggctctgcataaggct 323
            |||||||||||||||||||||
Sbjct: 3959 aactaggctctgcataaggct 3979

>ref|XM_921203.2| PREDICTED: Mus musculus protein tyrosine phosphatase, non-receptor
            type 3, transcript variant 6 (Ptpn3), mRNA
          Length = 6284

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 303  aactaggctctgcataaggct 323
            |||||||||||||||||||||
Sbjct: 3520 aactaggctctgcataaggct 3540

>gb|AE014075.1| Escherichia coli CFT073, complete genome
          Length = 5231428

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 318     aaggctttgcgcagctccgtt 338
               |||||||||||||||||||||
Sbjct: 2034302 aaggctttgcgcagctccgtt 2034282

>gb|CP000243.1| Escherichia coli UTI89, complete genome
          Length = 5065741

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 318     aaggctttgcgcagctccgtt 338
               |||||||||||||||||||||
Sbjct: 1909320 aaggctttgcgcagctccgtt 1909300

>dbj|AK035295.1| Mus musculus adult male urinary bladder cDNA, RIKEN full-length
            enriched library, clone:9530011I20
            product:unclassifiable, full insert sequence
          Length = 2414

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 303  aactaggctctgcataaggct 323
            |||||||||||||||||||||
Sbjct: 1781 aactaggctctgcataaggct 1801

>emb|AL805921.7| Mouse DNA sequence from clone RP23-293N9 on chromosome 4, complete
             sequence
          Length = 162090

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 303   aactaggctctgcataaggct 323
             |||||||||||||||||||||
Sbjct: 53805 aactaggctctgcataaggct 53785

>emb|AL713854.9| Mouse DNA sequence from clone RP23-477E1 on chromosome 8, complete
             sequence
          Length = 169876

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 6     ccaaaccaacatctgaccttctgaa 30
             |||||||||| ||||||||||||||
Sbjct: 73408 ccaaaccaacttctgaccttctgaa 73432

>gb|AC121514.14| Mus musculus chromosome 8, clone RP24-394H9, complete sequence
          Length = 168316

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 109   agttaaaatcagttaagctgaaac 132
             ||||||||||| ||||||||||||
Sbjct: 56968 agttaaaatcaattaagctgaaac 56945

>emb|CT010522.7| Mouse DNA sequence from clone RP23-310H3 on chromosome 16, complete
             sequence
          Length = 169798

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 2     atttccaaaccaacatctga 21
             ||||||||||||||||||||
Sbjct: 17498 atttccaaaccaacatctga 17479

>gb|AC111103.7| Mus musculus chromosome 16, clone RP23-187G7, complete sequence
          Length = 222348

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 2     atttccaaaccaacatctga 21
             ||||||||||||||||||||
Sbjct: 99312 atttccaaaccaacatctga 99331

>emb|AL138768.23| Human DNA sequence from clone RP11-8L18 on chromosome 10 Contains part of
              the PARD3 gene for par-3 partitioning defective 3 homolog
              (C.elegans), a 40S ribosomal protein S12 (RPS12) pseudogene
              and a 60S ribosomal protein L37 (RPL37) pseudogene,
              complete sequence
          Length = 176405

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 369    ggatgcatgttgaaaacgta 388
              ||||||||||||||||||||
Sbjct: 161620 ggatgcatgttgaaaacgta 161601

>emb|AL049595.5|HSJ501M23 Human DNA sequence from clone RP3-501M23 on chromosome 6q13-14.3,
             complete sequence
          Length = 76782

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 200   cacttgagatggcactcgta 219
             ||||||||||||||||||||
Sbjct: 70808 cacttgagatggcactcgta 70789

>gb|AC158295.5| Mus musculus chromosome 8, clone RP24-208G23, complete sequence
          Length = 167209

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 109   agttaaaatcagttaagctgaaac 132
             ||||||||||| ||||||||||||
Sbjct: 84366 agttaaaatcaattaagctgaaac 84389

>emb|AL133279.7|CNS01DUM Human chromosome 14 DNA sequence BAC R-753D20 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 197224

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 233   ttaccaaaagatcacagcac 252
             ||||||||||||||||||||
Sbjct: 85382 ttaccaaaagatcacagcac 85363

>gb|AC153617.3| Mus musculus 6 BAC RP23-177G20 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 199525

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 398   tgcagatacttgcatcccatttgg 421
             ||||||||||||||| ||||||||
Sbjct: 87958 tgcagatacttgcatgccatttgg 87981

>gb|AC125066.5| Mus musculus BAC clone RP23-430N17 from 16, complete sequence
          Length = 197813

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 100   tgagaataaagttaaaatca 119
             ||||||||||||||||||||
Sbjct: 15682 tgagaataaagttaaaatca 15701


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,218,407
Number of Sequences: 3902068
Number of extensions: 3218407
Number of successful extensions: 52795
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 52724
Number of HSP's gapped (non-prelim): 71
length of query: 425
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 403
effective length of database: 17,147,199,772
effective search space: 6910321508116
effective search space used: 6910321508116
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)