>MMT1_HORVU (Q9MBC2) Methionine S-methyltransferase (EC 2.1.1.12) (AdoMet:Met|
            S-methyltransferase) (Hv-MMT1)
          Length = 1088

 Score =  188 bits (477), Expect = 5e-48
 Identities = 90/90 (100%), Positives = 90/90 (100%)
 Frame = -1

Query: 418  GCHGGISMLAKPTAYIGKSLKVDGFEGKLDSHNMREALLRSTGLCISSSGWTGVPDYCRF 239
            GCHGGISMLAKPTAYIGKSLKVDGFEGKLDSHNMREALLRSTGLCISSSGWTGVPDYCRF
Sbjct: 995  GCHGGISMLAKPTAYIGKSLKVDGFEGKLDSHNMREALLRSTGLCISSSGWTGVPDYCRF 1054

Query: 238  SFALESGDFDRAMECIARFRELVLGGGAKV 149
            SFALESGDFDRAMECIARFRELVLGGGAKV
Sbjct: 1055 SFALESGDFDRAMECIARFRELVLGGGAKV 1084

>MMT1_MAIZE (Q8W519) Methionine S-methyltransferase (EC 2.1.1.12) (AdoMet:Met|
            S-methyltransferase)
          Length = 1091

 Score =  138 bits (348), Expect = 5e-33
 Identities = 64/86 (74%), Positives = 77/86 (89%)
 Frame = -1

Query: 418  GCHGGISMLAKPTAYIGKSLKVDGFEGKLDSHNMREALLRSTGLCISSSGWTGVPDYCRF 239
            GC GGISMLAKPTAY+GK+ K  GF+G+LD+ N+REA+LR+TGLCI+SS WTG+P YCRF
Sbjct: 1001 GC-GGISMLAKPTAYMGKAFKAAGFDGELDASNIREAILRATGLCINSSSWTGIPGYCRF 1059

Query: 238  SFALESGDFDRAMECIARFRELVLGG 161
            SFALE G+F+RAM CIARF+ELVLGG
Sbjct: 1060 SFALERGEFERAMGCIARFKELVLGG 1085

>MMT1_WOLBI (Q9SWR3) Methionine S-methyltransferase (EC 2.1.1.12) (AdoMet:Met|
            S-methyltransferase)
          Length = 1088

 Score =  113 bits (282), Expect = 2e-25
 Identities = 51/84 (60%), Positives = 70/84 (83%), Gaps = 4/84 (4%)
 Frame = -1

Query: 409  GGISMLAKPTAYIGKSLKV--DG--FEGKLDSHNMREALLRSTGLCISSSGWTGVPDYCR 242
            GG+S++AKP+AY+GK++K+  DG  +  KLD  N+REA+LR+TGLCI+   WTG+PDYCR
Sbjct: 1004 GGVSVIAKPSAYLGKNIKLEKDGSTWVTKLDGTNIREAMLRATGLCINGPSWTGIPDYCR 1063

Query: 241  FSFALESGDFDRAMECIARFRELV 170
            F+FALE GDFDRA++CI +F +LV
Sbjct: 1064 FTFALEDGDFDRALDCIVKFNQLV 1087

>MMT1_ARATH (Q9LTB2) Methionine S-methyltransferase (EC 2.1.1.12) (AdoMet:Met|
            S-methyltransferase)
          Length = 1071

 Score = 91.3 bits (225), Expect = 8e-19
 Identities = 41/83 (49%), Positives = 59/83 (71%), Gaps = 4/83 (4%)
 Frame = -1

Query: 406  GISMLAKPTAYIGKSLKVDGFEGK----LDSHNMREALLRSTGLCISSSGWTGVPDYCRF 239
            GISM+AKP AY+ K +K+   +G+    L   NMR+  L  TG+C++S  WTG+P YCRF
Sbjct: 987  GISMVAKPKAYLNKKVKLKAGDGQEIVELTDSNMRDVFLSHTGVCLNSGSWTGIPGYCRF 1046

Query: 238  SFALESGDFDRAMECIARFRELV 170
            SFALE  +FD+A+E IA+F+ ++
Sbjct: 1047 SFALEDSEFDKAIESIAQFKSVL 1069

>EGFL7_HUMAN (Q9UHF1) EGF-like domain-containing protein 7 precursor (Multiple|
           EGF-like domain protein 7) (Multiple epidermal growth
           factor-like domain protein 7) (Vascular endothelial
           statin) (VE-statin) (NOTCH4-like protein) (ZNEU1)
          Length = 273

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 24/64 (37%), Positives = 29/64 (45%)
 Frame = +1

Query: 217 RRSPKQS*SGSSPAPLSTRCC*CTARWTSGGLPSCCGCPACPQSRPP*AICQCRRSVLQA 396
           RRSP     G +PA     CC    R  + GLP  CG   C   +PP   C+   S +Q 
Sbjct: 74  RRSP-----GLAPARPRYACCPGWKR--TSGLPGACGAAIC---QPP---CRNGGSCVQP 120

Query: 397 SRCR 408
            RCR
Sbjct: 121 GRCR 124

>SREC2_MOUSE (P59222) Scavenger receptor class F member 2 precursor (Scavenger|
           receptor expressed by endothelial cells 2 protein)
           (SREC-II)
          Length = 833

 Score = 30.4 bits (67), Expect = 1.7
 Identities = 27/98 (27%), Positives = 33/98 (33%), Gaps = 6/98 (6%)
 Frame = +1

Query: 139 CYHSP*HRHQGPAP*TGRCTP-WPGRSRRSPKQS*SGSSPAPLSTRCC*CTARWTSGGLP 315
           C H   H   G      RC P W G    S     S +S     T  C C   W      
Sbjct: 150 CQHGTCHPRSGAC----RCEPGWWGAQCASACYC-SATSRCDPQTGACLCHVGWWGRSCN 204

Query: 316 SCCGCPACPQSRPP*AICQCRRSVLQA-----SRCRHG 414
           + C C + P  +     CQCR  +  A      +C HG
Sbjct: 205 NQCACNSSPCEQQS-GRCQCRERMFGARCDRYCQCSHG 241

>SREC2_HUMAN (Q96GP6) Scavenger receptor class F member 2 precursor (Scavenger|
           receptor expressed by endothelial cells 2 protein)
           (SREC-II) (SRECRP-1)
          Length = 866

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 27/90 (30%), Positives = 31/90 (34%), Gaps = 1/90 (1%)
 Frame = +1

Query: 139 CYHSP*HRHQGPAP*TGRCTP-WPGRSRRSPKQS*SGSSPAPLSTRCC*CTARWTSGGLP 315
           C H   H   G      RC P W G    S     S +S     T  C C A W      
Sbjct: 158 CQHGTCHPRSGAC----RCEPGWWGAQCASACYC-SATSRCDPQTGACLCHAGWWGRSCN 212

Query: 316 SCCGCPACPQSRPP*AICQCRRSVLQASRC 405
           + C C + P  +     CQCR     A RC
Sbjct: 213 NQCACNSSPCEQQS-GRCQCRERTFGA-RC 240

>NMDE3_HUMAN (Q14957) Glutamate [NMDA] receptor subunit epsilon 3 precursor|
           (N-methyl D-aspartate receptor subtype 2C) (NR2C)
           (NMDAR2C)
          Length = 1233

 Score = 26.9 bits (58), Expect(2) = 3.7
 Identities = 13/38 (34%), Positives = 16/38 (42%)
 Frame = +1

Query: 166 QGPAP*TGRCTPWPGRSRRSPKQS*SGSSPAPLSTRCC 279
           + P P TG C P     RR    + S    AP +  CC
Sbjct: 417 ESPDPGTGGCVPNTVPCRRQSNHTFSSGDVAPYTKLCC 454



 Score = 20.8 bits (42), Expect(2) = 3.7
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +2

Query: 128 QPLVATIHLSTATKDQLP 181
           QP+V + HL+ AT ++ P
Sbjct: 395 QPVVDSRHLTVATLEERP 412

>TISD_MOUSE (P23949) Butyrate response factor 2 (TIS11D protein)|
          Length = 367

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = +1

Query: 214 SRRSPKQS*SGSSPAPLSTRCC*CTARWTSGGLPSCCGCPA 336
           SR  P  S S SS +  ++ C   +A  T  G P+CC   A
Sbjct: 260 SRTPPPPSSSASSCSSSASSCSSASAASTPSGAPTCCATAA 300

>TAF2_YEAST (P23255) Transcription initiation factor TFIID subunit 2|
           (TBP-associated factor 2) (TBP-associated factor 150
           kDa) (TAFII-150) (TSM-1)
          Length = 1407

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -1

Query: 256 PDYCRFSFALESGDFDRAMECIARFRELVLGGGAK 152
           PDY   S   + GD +  +E I  + ++V+ GG K
Sbjct: 860 PDYMFSSQLRQDGDIEAQLEAIRYYEDVVVNGGVK 894

>YT35_STRFR (P20186) Hypothetical 35.5 kDa protein in transposon Tn4556|
          Length = 348

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 22/63 (34%), Positives = 25/63 (39%)
 Frame = +1

Query: 169 GPAP*TGRCTPWPGRSRRSPKQS*SGSSPAPLSTRCC*CTARWTSGGLPSCCGCPACPQS 348
           GP   TG          RSP  +    SPAPL+ RC    A     G P+  G    P  
Sbjct: 182 GPDTRTGPRLSRSSSETRSPGGTVQPKSPAPLAARCSASRA-----GCPTAAG-SLLPAP 235

Query: 349 RPP 357
           RPP
Sbjct: 236 RPP 238

>LCMT1_ASPFU (Q4WS57) Leucine carboxyl methyltransferase 1 (EC 2.1.1.-) (Protein|
           phosphatase methyltransferase 1)
          Length = 398

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 6/49 (12%)
 Frame = +2

Query: 134 LVATIHLSTATKDQLPEPGDALHG------PVEVAALQSKAEAAVVRHP 262
           L  T+ L +A    +P+ GDALH       PV++  L +   A   R P
Sbjct: 169 LQRTLGLGSAQNVAIPDSGDALHSPTYHLHPVDLRTLAASGSATTSRSP 217

>KR412_HUMAN (Q9BQ66) Keratin-associated protein 4-12 (Keratin-associated|
           protein 4.12) (Ultrahigh sulfur keratin-associated
           protein 4.12)
          Length = 201

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 21/55 (38%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
 Frame = +1

Query: 253 PAPLSTRCC*CTARWTSGGLPSCCGCPACPQSRPP*AICQ---CRRSVLQASRCR 408
           P+   T CC  T    S  + SCC  P C QS      CQ   CR S  Q + CR
Sbjct: 63  PSCCQTTCCRTTCCRPSCCVSSCCR-PQCCQS----VCCQPTCCRPSCCQTTCCR 112



 Score = 28.1 bits (61), Expect = 8.6
 Identities = 21/55 (38%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
 Frame = +1

Query: 253 PAPLSTRCC*CTARWTSGGLPSCCGCPACPQSRPP*AICQ---CRRSVLQASRCR 408
           P+   T CC  T    S  + SCC  P C QS      CQ   CR S  Q + CR
Sbjct: 23  PSCCQTTCCRTTCCRPSCCVSSCCR-PQCCQS----VCCQPTCCRPSCCQTTCCR 72

>KR413_HUMAN (Q9BYU7) Keratin-associated protein 4-13 (Keratin-associated|
           protein 4.13) (Ultrahigh sulfur keratin-associated
           protein 4.13)
          Length = 106

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 22/61 (36%), Positives = 24/61 (39%), Gaps = 9/61 (14%)
 Frame = +1

Query: 253 PAPLSTRCC*CTARWTSGGLPSCCGCPACPQS--RPP*AICQ-------CRRSVLQASRC 405
           P+   T CC  T    S   PSCC  P C QS    P   C        CR    Q +RC
Sbjct: 23  PSYCQTTCCRTTCCRPSCCRPSCCR-PQCCQSVCCQPTCCCPSYCVSSCCRPQCCQTTRC 81

Query: 406 R 408
           R
Sbjct: 82  R 82

>HEM1_SCHPO (O14092) 5-aminolevulinate synthase, mitochondrial precursor (EC|
           2.3.1.37) (5-aminolevulinic acid synthase)
           (Delta-aminolevulinate synthase) (Delta-ALA synthetase)
          Length = 558

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 4/79 (5%)
 Frame = +2

Query: 194 ALHGPVEVAALQSKAEAAVVRHPCXXXXXXXXXXXXXEGFPH---VVAVQLALKAVHLER 364
           AL        +++ A   VVRH                GF      +A++ +L  +HL+ 
Sbjct: 22  ALRRMAGAGLIRAGARCPVVRH--ALPVAAATGADVSRGFKSDSKQMAMEPSLDEIHLKA 79

Query: 365 -FANVGGRFCKHRDAAMAA 418
              N G R C+H DA  AA
Sbjct: 80  GVVNTGSRTCRHADAVKAA 98

>CRBB3_RAT (P02524) Beta crystallin B3 (Beta-B3-crystallin)|
          Length = 210

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 8/77 (10%)
 Frame = -1

Query: 412 HGGISMLAKPTAYIGKSLKVDGFEGK-----LDSHNMREALLRSTG-LCISSSGWTGVP- 254
           HGG+    K T Y     +++ F+GK      +  N+ E+LL+  G + + S  W     
Sbjct: 16  HGGLGGSYKVTVY-----ELENFQGKRCELSAECPNLTESLLQKVGSIQVESGPWLAFER 70

Query: 253 -DYCRFSFALESGDFDR 206
             +    F LE GD+ R
Sbjct: 71  RAFRGEQFVLEKGDYPR 87

>HLX1_HUMAN (Q14774) Homeobox protein HLX1 (Homeobox protein HB24)|
          Length = 488

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 17/52 (32%), Positives = 20/52 (38%)
 Frame = +1

Query: 112 HLTHPTTPSCYHSP*HRHQGPAP*TGRCTPWPGRSRRSPKQS*SGSSPAPLS 267
           H  HP        P  +   P P  G   P    +R  P    SGS+PAP S
Sbjct: 120 HHHHPQQQQQQQQPQQQQPPPPPRAGALQPPASGTRVVPNPHHSGSAPAPSS 171


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,447,828
Number of Sequences: 219361
Number of extensions: 1069842
Number of successful extensions: 3170
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3003
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3161
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2228238148
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)