ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl26e12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_632579.1| Dictyostelium discoideum hypothetical protein (... 40 2.5
2gb|AC104707.2| Oryza sativa (japonica cultivar-group) chromosome... 40 2.5
3ref|XM_861089.1| PREDICTED: Canis familiaris similar to LIM doma... 40 2.5
4ref|XM_847603.1| PREDICTED: Canis familiaris similar to LIM doma... 40 2.5
5ref|XM_861065.1| PREDICTED: Canis familiaris similar to LIM doma... 40 2.5
6ref|XM_861051.1| PREDICTED: Canis familiaris similar to LIM doma... 40 2.5
7ref|XM_861035.1| PREDICTED: Canis familiaris similar to LIM doma... 40 2.5
8ref|XM_861018.1| PREDICTED: Canis familiaris similar to LIM doma... 40 2.5
9ref|XM_861003.1| PREDICTED: Canis familiaris similar to LIM doma... 40 2.5
10ref|XM_543489.2| PREDICTED: Canis familiaris similar to LIM doma... 40 2.5
11emb|BX510316.11| Zebrafish DNA sequence from clone CH211-194J3 i... 40 2.5
12gb|AC017063.8| Homo sapiens BAC clone RP11-354H17 from 4, comple... 40 2.5
13gb|AC155282.1| Medicago truncatula chromosome 2 BAC clone mth2-6... 40 2.5
14dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.5
15ref|NM_001034030.1| Mus musculus LIM motif-containing protein ki... 38 9.9
16ref|NM_010718.3| Mus musculus LIM motif-containing protein kinas... 38 9.9
17ref|NM_173053.1| Mus musculus LIM motif-containing protein kinas... 38 9.9
18gb|BC065578.1| Rattus norvegicus LIM motif-containing protein ki... 38 9.9
19gb|AC094950.6| Rattus norvegicus 14 BAC CH230-6H12 (Children's H... 38 9.9
20emb|AJ965256.1| Dehalococcoides sp. CBDB1 complete genome 38 9.9
21ref|XM_387537.1| Gibberella zeae PH-1 chromosome 4 hypothetical ... 38 9.9
22gb|AY932004.1| HIV-1 isolate TZMDE710-3-6 from Tanzania nonfunct... 38 9.9
23gb|AC004554.1| Homo sapiens X BAC GSHB-590J6 (Genome Systems Hum... 38 9.9
24emb|CR931728.1| Medicago truncatula chromosome 5 clone mth2-175g... 38 9.9
25ref|NM_001038098.1| Bos taurus LIM domain kinase 2 (LIMK2), mRNA 38 9.9
26gb|AC108027.5| Homo sapiens BAC clone RP11-64C8 from 4, complete... 38 9.9
27gb|AC146342.5| Medicago truncatula clone mth2-10o20, complete se... 38 9.9
28gb|BC109802.1| Bos taurus cDNA clone MGC:134164 IMAGE:8041524, c... 38 9.9
29dbj|AK034900.1| Mus musculus 12 days embryo embryonic body betwe... 38 9.9
30gb|AC108201.2| Homo sapiens BAC clone RP11-18M21 from 4, complet... 38 9.9
31dbj|AB005140.2| Mus musculus limk2 gene for LIMK2, partial cds 38 9.9
32dbj|AB074454.1| Macaca fascicularis testis cDNA clone:QtsA-21032... 38 9.9
33gb|AF283102.1|AF283102 Xenopus laevis Nkx2-5 (Nkx2-5) gene, prom... 38 9.9
34ref|NM_024135.2| Rattus norvegicus LIM motif-containing protein ... 38 9.9
35gb|AC092583.2| Homo sapiens BAC clone RP11-19B22 from 2, complet... 38 9.9
36gb|U88618.1|MMU88618 Mus musculus LIM kinase 2 mRNA, complete cds 38 9.9
37gb|BC086629.1| Mus musculus cDNA clone IMAGE:6812720, containing... 38 9.9
38emb|CT573044.1| Pig DNA sequence from clone XX-BE156J14 on chrom... 38 9.9
39gb|BC007129.1| Mus musculus LIM motif-containing protein kinase ... 38 9.9
40emb|CT009750.2| Medicago truncatula chromosome 5 clone mth2-46a1... 38 9.9
41emb|AL713875.14| Mouse DNA sequence from clone RP23-17N7 on chro... 38 9.9
42dbj|D31877.1|RATLIMK2D Rat mRNA for LIMK-2d, complete cds 38 9.9
43dbj|D31876.1|RATLIMK2C Rat mRNA for LIMK-2c, complete cds 38 9.9
44dbj|D31875.1|RATLIMK2B Rat mRNA for LIMK-2b, complete cds 38 9.9
45dbj|D31874.1|RATLIMK2A Rat mRNA for LIMK-2a, complete cds 38 9.9
46dbj|AB008117.1| Mus musculus mRNA for LIMK-2, complete cds 38 9.9
47dbj|AB005132.1| Mus musculus mRNA for LIMK2b, complete cds 38 9.9
48dbj|AB005131.1| Mus musculus mRNA for LIMK2, complete cds 38 9.9
49dbj|AB012291.1| Mus musculus mRNA for tLIMK2, complete cds 38 9.9
50dbj|AB012092.1| Mus musculus Limk2t mRNA for testis-specific LIM... 38 9.9 
>ref|XM_632579.1| Dictyostelium discoideum hypothetical protein (DDB0187142), partial
            mRNA
          Length = 4806

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 27   gagattcaacgtttacaaca 46
            ||||||||||||||||||||
Sbjct: 3637 gagattcaacgtttacaaca 3656
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>gb|AC104707.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1118_F06,
             complete sequence
          Length = 136143

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 144   ataattacaaggacaagaag 163
             ||||||||||||||||||||
Sbjct: 90518 ataattacaaggacaagaag 90537
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>ref|XM_861089.1| PREDICTED: Canis familiaris similar to LIM domain kinase 2 isoform
            2b, transcript variant 8 (LOC486363), mRNA
          Length = 2406

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 148  ttacaaggacaagaagctga 167
            ||||||||||||||||||||
Sbjct: 1413 ttacaaggacaagaagctga 1432
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>ref|XM_847603.1| PREDICTED: Canis familiaris similar to LIM domain kinase 2 isoform
            2b, transcript variant 2 (LOC486363), mRNA
          Length = 2203

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 148  ttacaaggacaagaagctga 167
            ||||||||||||||||||||
Sbjct: 1210 ttacaaggacaagaagctga 1229
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>ref|XM_861065.1| PREDICTED: Canis familiaris similar to LIM domain kinase 2 isoform
            2b, transcript variant 7 (LOC486363), mRNA
          Length = 2412

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 148  ttacaaggacaagaagctga 167
            ||||||||||||||||||||
Sbjct: 1419 ttacaaggacaagaagctga 1438
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>ref|XM_861051.1| PREDICTED: Canis familiaris similar to LIM domain kinase 2 isoform
            2b, transcript variant 6 (LOC486363), mRNA
          Length = 2364

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 148  ttacaaggacaagaagctga 167
            ||||||||||||||||||||
Sbjct: 1371 ttacaaggacaagaagctga 1390
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>ref|XM_861035.1| PREDICTED: Canis familiaris similar to LIM domain kinase 2 isoform
            2b, transcript variant 5 (LOC486363), mRNA
          Length = 2415

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 148  ttacaaggacaagaagctga 167
            ||||||||||||||||||||
Sbjct: 1422 ttacaaggacaagaagctga 1441
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>ref|XM_861018.1| PREDICTED: Canis familiaris similar to LIM domain kinase 2 isoform
            2b, transcript variant 4 (LOC486363), mRNA
          Length = 2466

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 148  ttacaaggacaagaagctga 167
            ||||||||||||||||||||
Sbjct: 1473 ttacaaggacaagaagctga 1492
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>ref|XM_861003.1| PREDICTED: Canis familiaris similar to LIM domain kinase 2 isoform
           2b, transcript variant 3 (LOC486363), mRNA
          Length = 1521

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 148 ttacaaggacaagaagctga 167
           ||||||||||||||||||||
Sbjct: 528 ttacaaggacaagaagctga 547
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>ref|XM_543489.2| PREDICTED: Canis familiaris similar to LIM domain kinase 2 isoform
            2b, transcript variant 1 (LOC486363), mRNA
          Length = 2436

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 148  ttacaaggacaagaagctga 167
            ||||||||||||||||||||
Sbjct: 1443 ttacaaggacaagaagctga 1462
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>emb|BX510316.11| Zebrafish DNA sequence from clone CH211-194J3 in linkage group 12,
             complete sequence
          Length = 189720

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 114   ccactggcagattattacta 133
             ||||||||||||||||||||
Sbjct: 87757 ccactggcagattattacta 87738
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>gb|AC017063.8| Homo sapiens BAC clone RP11-354H17 from 4, complete sequence
          Length = 193092

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 146   aattacaaggacaagaagct 165
             ||||||||||||||||||||
Sbjct: 22573 aattacaaggacaagaagct 22592
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>gb|AC155282.1| Medicago truncatula chromosome 2 BAC clone mth2-63e12, complete
             sequence
          Length = 251117

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 43    aacataacaaagtacacaaataga 66
             |||||||||||| |||||||||||
Sbjct: 31392 aacataacaaagaacacaaataga 31369
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 144      ataattacaaggacaagaag 163
                ||||||||||||||||||||
Sbjct: 17713760 ataattacaaggacaagaag 17713779
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>ref|NM_001034030.1| Mus musculus LIM motif-containing protein kinase 2 (Limk2),
           transcript variant 3, mRNA
          Length = 3812

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 149 tacaaggacaagaagctga 167
           |||||||||||||||||||
Sbjct: 724 tacaaggacaagaagctga 742
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>ref|NM_010718.3| Mus musculus LIM motif-containing protein kinase 2 (Limk2),
            transcript variant 1, mRNA
          Length = 4448

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 149  tacaaggacaagaagctga 167
            |||||||||||||||||||
Sbjct: 1360 tacaaggacaagaagctga 1378
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>ref|NM_173053.1| Mus musculus LIM motif-containing protein kinase 2 (Limk2),
            transcript variant 2, mRNA
          Length = 4668

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 149  tacaaggacaagaagctga 167
            |||||||||||||||||||
Sbjct: 1494 tacaaggacaagaagctga 1512
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>gb|BC065578.1| Rattus norvegicus LIM motif-containing protein kinase 2, mRNA (cDNA
            clone MGC:72430 IMAGE:5623751), complete cds
          Length = 3673

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 149  tacaaggacaagaagctga 167
            |||||||||||||||||||
Sbjct: 1433 tacaaggacaagaagctga 1451
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>gb|AC094950.6| Rattus norvegicus 14 BAC CH230-6H12 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 237532

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 149   tacaaggacaagaagctga 167
             |||||||||||||||||||
Sbjct: 31240 tacaaggacaagaagctga 31258
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>emb|AJ965256.1| Dehalococcoides sp. CBDB1 complete genome
          Length = 1395502

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 117    ctggcagattattactact 135
              |||||||||||||||||||
Sbjct: 264781 ctggcagattattactact 264799
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>ref|XM_387537.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG07361.1)
            partial mRNA
          Length = 5268

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 180  aggagcatattaagattgc 198
            |||||||||||||||||||
Sbjct: 1733 aggagcatattaagattgc 1751
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>gb|AY932004.1| HIV-1 isolate TZMDE710-3-6 from Tanzania nonfunctional envelope
           glycoprotein (env) gene, partial sequence
          Length = 663

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 48  aacaaagtacacaaataga 66
           |||||||||||||||||||
Sbjct: 98  aacaaagtacacaaataga 116
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>gb|AC004554.1| Homo sapiens X BAC GSHB-590J6 (Genome Systems Human BAC library)
             complete sequence
          Length = 195142

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 149   tacaaggacaagaagctga 167
             |||||||||||||||||||
Sbjct: 70440 tacaaggacaagaagctga 70422
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>emb|CR931728.1| Medicago truncatula chromosome 5 clone mth2-175g3, COMPLETE SEQUENCE
          Length = 115300

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 132   tactctcttcacataatta 150
             |||||||||||||||||||
Sbjct: 97053 tactctcttcacataatta 97035
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>ref|NM_001038098.1| Bos taurus LIM domain kinase 2 (LIMK2), mRNA
          Length = 2274

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 149  tacaaggacaagaagctga 167
            |||||||||||||||||||
Sbjct: 1272 tacaaggacaagaagctga 1290
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>gb|AC108027.5| Homo sapiens BAC clone RP11-64C8 from 4, complete sequence
          Length = 73256

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 59    caaatagatggtacttaag 77
             |||||||||||||||||||
Sbjct: 43222 caaatagatggtacttaag 43240
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>gb|AC146342.5| Medicago truncatula clone mth2-10o20, complete sequence
          Length = 112154

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 42    caacataacaaagtacaca 60
             |||||||||||||||||||
Sbjct: 23735 caacataacaaagtacaca 23717
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>gb|BC109802.1| Bos taurus cDNA clone MGC:134164 IMAGE:8041524, complete cds
          Length = 2274

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 149  tacaaggacaagaagctga 167
            |||||||||||||||||||
Sbjct: 1272 tacaaggacaagaagctga 1290
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>dbj|AK034900.1| Mus musculus 12 days embryo embryonic body between diaphragm region
           and neck cDNA, RIKEN full-length enriched library,
           clone:9430059K01 product:LIM motif-containing protein
           kinase 2, full insert sequence
          Length = 3199

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 149 tacaaggacaagaagctga 167
           |||||||||||||||||||
Sbjct: 25  tacaaggacaagaagctga 43
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>gb|AC108201.2| Homo sapiens BAC clone RP11-18M21 from 4, complete sequence
          Length = 176099

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 58    acaaatagatggtacttaa 76
             |||||||||||||||||||
Sbjct: 59566 acaaatagatggtacttaa 59584
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>dbj|AB005140.2| Mus musculus limk2 gene for LIMK2, partial cds
          Length = 11213

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 149  tacaaggacaagaagctga 167
            |||||||||||||||||||
Sbjct: 6172 tacaaggacaagaagctga 6190
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>dbj|AB074454.1| Macaca fascicularis testis cDNA clone:QtsA-21032, similar to human
           Boule-like protein (BOLL), mRNA, NM_033030
          Length = 2636

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 145 taattacaaggacaagaagctga 167
           |||||||||||| ||||||||||
Sbjct: 377 taattacaaggataagaagctga 399
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>gb|AF283102.1|AF283102 Xenopus laevis Nkx2-5 (Nkx2-5) gene, promoter region and partial cds
          Length = 6152

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 125  ttattactactctcttcac 143
            |||||||||||||||||||
Sbjct: 1166 ttattactactctcttcac 1148
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>ref|NM_024135.2| Rattus norvegicus LIM motif-containing protein kinase 2 (Limk2), mRNA
          Length = 3455

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 149  tacaaggacaagaagctga 167
            |||||||||||||||||||
Sbjct: 1248 tacaaggacaagaagctga 1266
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>gb|AC092583.2| Homo sapiens BAC clone RP11-19B22 from 2, complete sequence
          Length = 155359

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 60    aaatagatggtacttaagcaaac 82
             |||||||||||||||||| ||||
Sbjct: 52991 aaatagatggtacttaagtaaac 52969
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>gb|U88618.1|MMU88618 Mus musculus LIM kinase 2 mRNA, complete cds
          Length = 3447

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 149  tacaaggacaagaagctga 167
            |||||||||||||||||||
Sbjct: 1216 tacaaggacaagaagctga 1234
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>gb|BC086629.1| Mus musculus cDNA clone IMAGE:6812720, containing frame-shift errors
          Length = 3670

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 149  tacaaggacaagaagctga 167
            |||||||||||||||||||
Sbjct: 1424 tacaaggacaagaagctga 1442
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>emb|CT573044.1| Pig DNA sequence from clone XX-BE156J14 on chromosome 14, complete
              sequence
          Length = 184551

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 149    tacaaggacaagaagctga 167
              |||||||||||||||||||
Sbjct: 128296 tacaaggacaagaagctga 128314
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>gb|BC007129.1| Mus musculus LIM motif-containing protein kinase 2, mRNA (cDNA clone
            MGC:5783 IMAGE:3496836), complete cds
          Length = 3375

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 149  tacaaggacaagaagctga 167
            |||||||||||||||||||
Sbjct: 1306 tacaaggacaagaagctga 1324
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>emb|CT009750.2| Medicago truncatula chromosome 5 clone mth2-46a17, COMPLETE SEQUENCE
          Length = 120704

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 132    tactctcttcacataatta 150
              |||||||||||||||||||
Sbjct: 113662 tactctcttcacataatta 113680
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>emb|AL713875.14| Mouse DNA sequence from clone RP23-17N7 on chromosome 11, complete
            sequence
          Length = 201123

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 149  tacaaggacaagaagctga 167
            |||||||||||||||||||
Sbjct: 4378 tacaaggacaagaagctga 4360
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>dbj|D31877.1|RATLIMK2D Rat mRNA for LIMK-2d, complete cds
          Length = 3827

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 149  tacaaggacaagaagctga 167
            |||||||||||||||||||
Sbjct: 1620 tacaaggacaagaagctga 1638
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>dbj|D31876.1|RATLIMK2C Rat mRNA for LIMK-2c, complete cds
          Length = 3703

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 149  tacaaggacaagaagctga 167
            |||||||||||||||||||
Sbjct: 1496 tacaaggacaagaagctga 1514
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>dbj|D31875.1|RATLIMK2B Rat mRNA for LIMK-2b, complete cds
          Length = 3684

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 149  tacaaggacaagaagctga 167
            |||||||||||||||||||
Sbjct: 1477 tacaaggacaagaagctga 1495
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>dbj|D31874.1|RATLIMK2A Rat mRNA for LIMK-2a, complete cds
          Length = 3455

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 149  tacaaggacaagaagctga 167
            |||||||||||||||||||
Sbjct: 1248 tacaaggacaagaagctga 1266
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>dbj|AB008117.1| Mus musculus mRNA for LIMK-2, complete cds
          Length = 3513

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 149  tacaaggacaagaagctga 167
            |||||||||||||||||||
Sbjct: 1299 tacaaggacaagaagctga 1317
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>dbj|AB005132.1| Mus musculus mRNA for LIMK2b, complete cds
          Length = 3688

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 149  tacaaggacaagaagctga 167
            |||||||||||||||||||
Sbjct: 1478 tacaaggacaagaagctga 1496
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>dbj|AB005131.1| Mus musculus mRNA for LIMK2, complete cds
          Length = 3426

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 149  tacaaggacaagaagctga 167
            |||||||||||||||||||
Sbjct: 1216 tacaaggacaagaagctga 1234
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>dbj|AB012291.1| Mus musculus mRNA for tLIMK2, complete cds
          Length = 1717

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 149 tacaaggacaagaagctga 167
           |||||||||||||||||||
Sbjct: 724 tacaaggacaagaagctga 742
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>dbj|AB012092.1| Mus musculus Limk2t mRNA for testis-specific LIM-kinase 2, complete
           cds
          Length = 1708

 Score = 38.2 bits (19), Expect = 9.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 149 tacaaggacaagaagctga 167
           |||||||||||||||||||
Sbjct: 724 tacaaggacaagaagctga 742


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,493,701
Number of Sequences: 3902068
Number of extensions: 1493701
Number of successful extensions: 101403
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 101298
Number of HSP's gapped (non-prelim): 105
length of query: 199
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 177
effective length of database: 17,147,199,772
effective search space: 3035054359644
effective search space used: 3035054359644
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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