>MUC1_HUMAN (P15941) Mucin-1 precursor (MUC-1) (Polymorphic epithelial mucin)|
           (PEM) (PEMT) (Episialin) (Tumor-associated mucin)
           (Carcinoma-associated mucin) (Tumor-associated
           epithelial membrane antigen) (EMA) (H23AG)
           (Peanut-reactive urinary mucin) (PUM)
          Length = 1255

 Score = 33.9 bits (76), Expect = 0.15
 Identities = 19/52 (36%), Positives = 27/52 (51%)
 Frame = +2

Query: 71  RDIITVAVTRLAGFKRSPQHSRATTAADNKPLAGFNRGPQHSKASTAADNKP 226
           +D+ +V VTR A    +P     T+A DNKP  G    P H   ++A D +P
Sbjct: 96  QDVTSVPVTRPALGSTTPPAHDVTSAPDNKPAPGSTAPPAHG-VTSAPDTRP 146

>PCE_TACTR (P21902) Proclotting enzyme precursor (EC 3.4.21.86) [Contains:|
           Proclotting enzyme light chain; Proclotting enzyme heavy
           chain]
          Length = 375

 Score = 30.4 bits (67), Expect = 1.7
 Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
 Frame = +3

Query: 195 LKQALLLITNHRQCSRYHEK--SIAHVHLNYA-AEASSDCCQHDNALPLVLP 341
           L++  L I  H  C + +EK  +I +V++    A+   D CQ D+  P++LP
Sbjct: 282 LREVQLPIWEHEACRQAYEKDLNITNVYMCAGFADGGKDACQGDSGGPMMLP 333

>SRA1_RAT (Q6QGW5) Steroid receptor RNA activator 1 (Steroid receptor RNA|
           activator protein) (SRAP)
          Length = 231

 Score = 30.0 bits (66), Expect = 2.2
 Identities = 20/62 (32%), Positives = 25/62 (40%), Gaps = 3/62 (4%)
 Frame = +2

Query: 53  FSHGIQRDIITVAVTRLAGFKRSPQHSRATTAADNKPLAGFNRGP---QHSKASTAADNK 223
           FS+G+Q        T+  G KR+P   R     D  P A    GP    H   S+ A   
Sbjct: 33  FSYGLQ--------TQTGGTKRTPLTKRVAAPQDGSPRAPETSGPPPVDHPPPSSKASRP 84

Query: 224 PP 229
           PP
Sbjct: 85  PP 86

>LAB_DROME (P10105) Homeotic protein labial (F24) (F90-2)|
          Length = 635

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 17/88 (19%)
 Frame = +2

Query: 116 RSPQHSRATTAADNK--------PLAGFNR---------GPQHSKASTAADNKPPAVQQI 244
           + PQH +  + A ++        P  G NR         G   S +++A++   PA  Q 
Sbjct: 321 QQPQHPQNQSPAAHQQHHQNSVSPNGGMNRQQRGGVISPGSSTSSSTSASNGAHPASTQS 380

Query: 245 P*KKHSSCTPKLRCRSLLRLLPTRQCPS 328
               HSS  P  +   L R +P  Q PS
Sbjct: 381 KSPNHSSSIPTYKWMQLKRNVPKPQAPS 408

>ESMC_DROME (Q01070) Enhancer of split mgamma protein (E(spl)mgamma)|
           (HLH-mgamma) (Split locus enhancer protein mB)
          Length = 205

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = +2

Query: 74  DIITVAVTRLAGFKRSPQHSRATTAADNKPLAGFNRGPQHS 196
           DI+ + VT L   K+  QH RA+      P  GF  G  H+
Sbjct: 60  DILELTVTHLQKMKQQRQHKRASGDESLTPAEGFRSGYIHA 100

>SRA1_MOUSE (Q80VJ2) Steroid receptor RNA activator 1 (Steroid receptor RNA|
           activator protein) (SRAP)
          Length = 220

 Score = 29.3 bits (64), Expect = 3.7
 Identities = 20/62 (32%), Positives = 25/62 (40%), Gaps = 3/62 (4%)
 Frame = +2

Query: 53  FSHGIQRDIITVAVTRLAGFKRSPQHSRATTAADNKPLAGFNRGP---QHSKASTAADNK 223
           FS+G+Q        T+  G KR+P   R     D  P A    GP    H   S+ A   
Sbjct: 21  FSYGLQ--------TQTGGPKRTPLTKRVAAPQDGSPRAPETSGPPPVDHPPPSSKASRP 72

Query: 224 PP 229
           PP
Sbjct: 73  PP 74

>MKNK2_RAT (Q5U2N4) MAP kinase-interacting serine/threonine-protein kinase 2|
           (EC 2.7.11.1) (MAP kinase signal-integrating kinase 2)
           (Mnk2)
          Length = 459

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
 Frame = +3

Query: 180 GAHNTLKQALLLITNHRQCSRYHEKSIAHVHLNYAAEASS--DCCQHDNALPLV 335
           GAH  ++  + LITN     +  EK + H+      E      C  H N L L+
Sbjct: 93  GAHARVQTCVNLITNQEYAVKIIEKQLGHIRSRVFREVEMLYQCQGHRNVLELI 146

>MKNK2_MOUSE (Q8CDB0) MAP kinase-interacting serine/threonine-protein kinase 2|
           (EC 2.7.11.1) (MAP kinase signal-integrating kinase 2)
           (Mnk2)
          Length = 459

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
 Frame = +3

Query: 180 GAHNTLKQALLLITNHRQCSRYHEKSIAHVHLNYAAEASS--DCCQHDNALPLV 335
           GAH  ++  + LITN     +  EK + H+      E      C  H N L L+
Sbjct: 93  GAHARVQTCVNLITNQEYAVKIIEKQLGHIRSRVFREVEMLYQCQGHRNVLELI 146

>GLUQ_VIBCH (Q9KUC7) Glutamyl-Q tRNA(Asp) synthetase (EC 6.1.1.-) (Glu-Q-RSs)|
          Length = 304

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
 Frame = +3

Query: 180 GAHNTLKQALLLITNHRQCSRYH---EKSIAHVHLNYAAEASSDCCQHDNALPLVLPTS 347
           G    ++ A L+    RQ S YH   +K ++++HL  A + + +     N  P + PT+
Sbjct: 190 GVTQVVRGADLIEPTGRQISLYHTLKQKPVSYLHLPLAMDGNGNKLSKQNHAPAIDPTA 248

>MUC1_HYLLA (Q29435) Mucin-1 precursor (MUC-1)|
          Length = 475

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 16/52 (30%), Positives = 25/52 (48%)
 Frame = +2

Query: 71  RDIITVAVTRLAGFKRSPQHSRATTAADNKPLAGFNRGPQHSKASTAADNKP 226
           +D+ +V VTR A    +      T+A D +P  G    P H   ++A D +P
Sbjct: 96  QDVTSVPVTRPAPGSTTSPAQDVTSAPDTRPALGSTAPPVHG-VTSAPDTRP 146


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,795,477
Number of Sequences: 219361
Number of extensions: 932083
Number of successful extensions: 2192
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2190
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2169600302
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)