ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl26e10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_450750.1| Oryza sativa (japonica cultivar-group), mRNA 198 1e-47
2dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 198 1e-47
3dbj|AP005838.3| Oryza sativa (japonica cultivar-group) genomic D... 198 1e-47
4dbj|AP005637.2| Oryza sativa (japonica cultivar-group) genomic D... 198 1e-47
5dbj|AK099766.1| Oryza sativa (japonica cultivar-group) cDNA clon... 198 1e-47
6dbj|AK070831.1| Oryza sativa (japonica cultivar-group) cDNA clon... 198 1e-47
7gb|AY106754.1| Zea mays PCO067360 mRNA sequence 180 3e-42
8dbj|AB257219.1| Phragmites australis PhaHAK4 mRNA for potassium ... 178 1e-41
9dbj|AB257218.1| Phragmites australis PhaHAK4 mRNA for potassium ... 178 1e-41
10gb|AY111302.1| Zea mays CL24961_1 mRNA sequence 70 7e-09
11dbj|AB257217.1| Phragmites australis PhaHAK4 mRNA for potassium ... 62 2e-06
12dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
13dbj|AP005185.4| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
14dbj|AK106582.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
15dbj|AP003815.2| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
16emb|BX005356.7| Zebrafish DNA sequence from clone CH211-255I20 i... 44 0.38
17gb|AY485619.1| Cryphonectria parasitica DNA-dependent RNA polyme... 42 1.5
18gb|AC158661.7| Mus musculus 6 BAC RP23-31E23 (Roswell Park Cance... 42 1.5
19gb|AC116703.10| Mus musculus chromosome 6, clone RP23-16O17, com... 42 1.5
20ref|NM_202821.1| Arabidopsis thaliana unknown protein AT4G14905 ... 40 5.9
21ref|NM_179056.1| Arabidopsis thaliana unknown protein AT4G14905 ... 40 5.9
22gb|AC121873.3| Mus musculus BAC clone RP24-123L3 from chromosome... 40 5.9
23gb|BC004099.1| Mus musculus aminolevulinic acid synthase 1, mRNA... 40 5.9
24emb|AJ276865.1|STU276865 Solanum tuberosum partial ure gene for ... 40 5.9
25emb|AJ276864.1|STU276864 Solanum tuberosum partial adk gene for ... 40 5.9
26gb|AC002307.1|HUAC002307 Homo sapiens Chromosome 16 BAC clone CI... 40 5.9
27ref|XM_807160.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 5.9
28gb|AC114938.3| Homo sapiens chromosome 16 clone CTD-2244D9, comp... 40 5.9
29gb|U80439.1| Caenorhabditis elegans cosmid C01G8, complete sequence 40 5.9
30gb|AC140915.6| Medicago truncatula clone mth2-10l24, complete se... 40 5.9
31gb|AY152836.1| Felis catus clone BAC 160a17 major histocompatibl... 40 5.9
32emb|Z97337.2|ATFCA2 Arabidopsis thaliana DNA chromosome 4, ESSA ... 40 5.9
33gb|AC141070.2| Homo sapiens chromosome 16 clone RP11-171B13, com... 40 5.9
34gb|BC022110.1| Mus musculus aminolevulinic acid synthase 1, mRNA... 40 5.9
35gb|AC008500.7| Homo sapiens chromosome 5 clone CTC-439D5, comple... 40 5.9
36gb|AC133569.4| Homo sapiens chromosome 16 clone RP11-96K14, comp... 40 5.9
37emb|BX828408.1|CNS0A3RL Arabidopsis thaliana Full-length cDNA Co... 40 5.9
38emb|BX828137.1|CNS0A3TK Arabidopsis thaliana Full-length cDNA Co... 40 5.9
39gb|AC137800.3| Homo sapiens chromosome 16 clone RP11-652G5, comp... 40 5.9
40gb|AC141293.2| Homo sapiens chromosome 16 clone RP11-51M16, comp... 40 5.9
41gb|BT005320.1| Arabidopsis thaliana At4g14905 mRNA, complete cds 40 5.9
42gb|AC139109.1| Homo sapiens chromosome 5 clone RP11-887F16, comp... 40 5.9
43gb|AC136612.2| Homo sapiens chromosome 16 clone RP11-319D11, com... 40 5.9
44dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete ge... 40 5.9
45dbj|AK117987.1| Arabidopsis thaliana mRNA for unknown protein, c... 40 5.9
46emb|CR450781.12| Zebrafish DNA sequence from clone DKEY-20O6 in ... 40 5.9
47gb|AC027354.3| Homo sapiens chromosome 16 clone RP11-179H7, comp... 40 5.9
48emb|AL161540.2|ATCHRIV40 Arabidopsis thaliana DNA chromosome 4, ... 40 5.9
49ref|NM_020559.1| Mus musculus aminolevulinic acid synthase 1 (Al... 40 5.9
50gb|AC136625.2| Homo sapiens chromosome 16 clone RP11-554I17, com... 40 5.9
51gb|AC136437.2| Homo sapiens chromosome 16 clone RP11-347D23, com... 40 5.9
52gb|M63245.1|MUSALASH Mus musculus amino levulinate synthase (ALA... 40 5.9

>ref|XM_450750.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3085

 Score =  198 bits (100), Expect = 1e-47
 Identities = 157/176 (89%)
 Strand = Plus / Minus

                                                                        
Query: 263  agccccgatcagaccatgtacgtcatccctacacgcatgatgttcgagtgaggcatcttc 322
            |||||| |||| |||||||| |||||||| |||||||| |||||||||||||| | ||||
Sbjct: 2749 agccccaatcacaccatgtatgtcatcccgacacgcataatgttcgagtgagggaccttc 2690

                                                                        
Query: 323  aaggttgcggtgccagccctgcagttcctcctcaggaaagcgtagaaatagttgatgatg 382
            ||||||||||| ||||||||||| |||||||| ||||| |||||||| || |||||||||
Sbjct: 2689 aaggttgcggttccagccctgcaattcctcctgaggaacgcgtagaagtaattgatgatg 2630

                                                                    
Query: 383  aacttctttgtgaagaatgattgcttcctcgccctcacatcgccatgtgccaagag 438
            |||||||| |||||||| |||| ||||||||||||||| || || |||||||||||
Sbjct: 2629 aacttcttcgtgaagaacgattccttcctcgccctcacgtcaccgtgtgccaagag 2574



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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  198 bits (100), Expect = 1e-47
 Identities = 157/176 (89%)
 Strand = Plus / Plus

                                                                            
Query: 263      agccccgatcagaccatgtacgtcatccctacacgcatgatgttcgagtgaggcatcttc 322
                |||||| |||| |||||||| |||||||| |||||||| |||||||||||||| | ||||
Sbjct: 12609409 agccccaatcacaccatgtatgtcatcccgacacgcataatgttcgagtgagggaccttc 12609468

                                                                            
Query: 323      aaggttgcggtgccagccctgcagttcctcctcaggaaagcgtagaaatagttgatgatg 382
                ||||||||||| ||||||||||| |||||||| ||||| |||||||| || |||||||||
Sbjct: 12609469 aaggttgcggttccagccctgcaattcctcctgaggaacgcgtagaagtaattgatgatg 12609528

                                                                        
Query: 383      aacttctttgtgaagaatgattgcttcctcgccctcacatcgccatgtgccaagag 438
                |||||||| |||||||| |||| ||||||||||||||| || || |||||||||||
Sbjct: 12609529 aacttcttcgtgaagaacgattccttcctcgccctcacgtcaccgtgtgccaagag 12609584



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>dbj|AP005838.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0041C07
          Length = 179047

 Score =  198 bits (100), Expect = 1e-47
 Identities = 157/176 (89%)
 Strand = Plus / Plus

                                                                         
Query: 263   agccccgatcagaccatgtacgtcatccctacacgcatgatgttcgagtgaggcatcttc 322
             |||||| |||| |||||||| |||||||| |||||||| |||||||||||||| | ||||
Sbjct: 75347 agccccaatcacaccatgtatgtcatcccgacacgcataatgttcgagtgagggaccttc 75406

                                                                         
Query: 323   aaggttgcggtgccagccctgcagttcctcctcaggaaagcgtagaaatagttgatgatg 382
             ||||||||||| ||||||||||| |||||||| ||||| |||||||| || |||||||||
Sbjct: 75407 aaggttgcggttccagccctgcaattcctcctgaggaacgcgtagaagtaattgatgatg 75466

                                                                     
Query: 383   aacttctttgtgaagaatgattgcttcctcgccctcacatcgccatgtgccaagag 438
             |||||||| |||||||| |||| ||||||||||||||| || || |||||||||||
Sbjct: 75467 aacttcttcgtgaagaacgattccttcctcgccctcacgtcaccgtgtgccaagag 75522



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>dbj|AP005637.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0711A01
          Length = 162400

 Score =  198 bits (100), Expect = 1e-47
 Identities = 157/176 (89%)
 Strand = Plus / Plus

                                                                          
Query: 263    agccccgatcagaccatgtacgtcatccctacacgcatgatgttcgagtgaggcatcttc 322
              |||||| |||| |||||||| |||||||| |||||||| |||||||||||||| | ||||
Sbjct: 124736 agccccaatcacaccatgtatgtcatcccgacacgcataatgttcgagtgagggaccttc 124795

                                                                          
Query: 323    aaggttgcggtgccagccctgcagttcctcctcaggaaagcgtagaaatagttgatgatg 382
              ||||||||||| ||||||||||| |||||||| ||||| |||||||| || |||||||||
Sbjct: 124796 aaggttgcggttccagccctgcaattcctcctgaggaacgcgtagaagtaattgatgatg 124855

                                                                      
Query: 383    aacttctttgtgaagaatgattgcttcctcgccctcacatcgccatgtgccaagag 438
              |||||||| |||||||| |||| ||||||||||||||| || || |||||||||||
Sbjct: 124856 aacttcttcgtgaagaacgattccttcctcgccctcacgtcaccgtgtgccaagag 124911



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>dbj|AK099766.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095A12, full
            insert sequence
          Length = 4054

 Score =  198 bits (100), Expect = 1e-47
 Identities = 157/176 (89%)
 Strand = Plus / Minus

                                                                        
Query: 263  agccccgatcagaccatgtacgtcatccctacacgcatgatgttcgagtgaggcatcttc 322
            |||||| |||| |||||||| |||||||| |||||||| |||||||||||||| | ||||
Sbjct: 3748 agccccaatcacaccatgtatgtcatcccgacacgcataatgttcgagtgagggaccttc 3689

                                                                        
Query: 323  aaggttgcggtgccagccctgcagttcctcctcaggaaagcgtagaaatagttgatgatg 382
            ||||||||||| ||||||||||| |||||||| ||||| |||||||| || |||||||||
Sbjct: 3688 aaggttgcggttccagccctgcaattcctcctgaggaacgcgtagaagtaattgatgatg 3629

                                                                    
Query: 383  aacttctttgtgaagaatgattgcttcctcgccctcacatcgccatgtgccaagag 438
            |||||||| |||||||| |||| ||||||||||||||| || || |||||||||||
Sbjct: 3628 aacttcttcgtgaagaacgattccttcctcgccctcacgtcaccgtgtgccaagag 3573



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>dbj|AK070831.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023063B21, full
            insert sequence
          Length = 3081

 Score =  198 bits (100), Expect = 1e-47
 Identities = 157/176 (89%)
 Strand = Plus / Minus

                                                                        
Query: 263  agccccgatcagaccatgtacgtcatccctacacgcatgatgttcgagtgaggcatcttc 322
            |||||| |||| |||||||| |||||||| |||||||| |||||||||||||| | ||||
Sbjct: 2745 agccccaatcacaccatgtatgtcatcccgacacgcataatgttcgagtgagggaccttc 2686

                                                                        
Query: 323  aaggttgcggtgccagccctgcagttcctcctcaggaaagcgtagaaatagttgatgatg 382
            ||||||||||| ||||||||||| |||||||| ||||| |||||||| || |||||||||
Sbjct: 2685 aaggttgcggttccagccctgcaattcctcctgaggaacgcgtagaagtaattgatgatg 2626

                                                                    
Query: 383  aacttctttgtgaagaatgattgcttcctcgccctcacatcgccatgtgccaagag 438
            |||||||| |||||||| |||| ||||||||||||||| || || |||||||||||
Sbjct: 2625 aacttcttcgtgaagaacgattccttcctcgccctcacgtcaccgtgtgccaagag 2570



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>gb|AY106754.1| Zea mays PCO067360 mRNA sequence
          Length = 1181

 Score =  180 bits (91), Expect = 3e-42
 Identities = 151/171 (88%)
 Strand = Plus / Minus

                                                                       
Query: 271 tcagaccatgtacgtcatccctacacgcatgatgttcgagtgaggcatcttcaaggttgc 330
           |||||||||||||||||| || ||||||||||||||||| || || | ||||| ||||||
Sbjct: 884 tcagaccatgtacgtcataccaacacgcatgatgttcgaatgggggaccttcagggttgc 825

                                                                       
Query: 331 ggtgccagccctgcagttcctcctcaggaaagcgtagaaatagttgatgatgaacttctt 390
            ||||| ||||||||||||||||| ||||| || |||||||||||||||| |||||||||
Sbjct: 824 agtgcccgccctgcagttcctcctgaggaacgcatagaaatagttgatgacgaacttctt 765

                                                              
Query: 391 tgtgaagaatgattgcttcctcgccctcacatcgccatgtgccaagagata 441
            ||||||| ||||| |||||||||||||||||| || ||||| | ||||||
Sbjct: 764 cgtgaagactgattccttcctcgccctcacatctccgtgtgctaggagata 714



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>dbj|AB257219.1| Phragmites australis PhaHAK4 mRNA for potassium transporter, complete
            cds, strain: Enchi
          Length = 2786

 Score =  178 bits (90), Expect = 1e-41
 Identities = 153/174 (87%)
 Strand = Plus / Minus

                                                                        
Query: 268  cgatcagaccatgtacgtcatccctacacgcatgatgttcgagtgaggcatcttcaaggt 327
            ||||||||||||||| ||||| || |||||||||||||| |||||||| | |||||  ||
Sbjct: 2588 cgatcagaccatgtatgtcataccgacacgcatgatgtttgagtgaggaaccttcagtgt 2529

                                                                        
Query: 328  tgcggtgccagccctgcagttcctcctcaggaaagcgtagaaatagttgatgatgaactt 387
            ||| |||||||||||||| |||||||| ||||| || ||||| ||||||||||| |||||
Sbjct: 2528 tgcagtgccagccctgcaattcctcctgaggaatgcatagaagtagttgatgataaactt 2469

                                                                  
Query: 388  ctttgtgaagaatgattgcttcctcgccctcacatcgccatgtgccaagagata 441
            |||  ||||||  |||| |||||||||||||||||||||||| |||||||||||
Sbjct: 2468 cttcatgaagagcgattccttcctcgccctcacatcgccatgggccaagagata 2415



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                          
Query: 174  gtacaatccctaaactacctgctggtgtagcattccatccaagatg 219
            ||||||||||||||||||| ||||||| || || ||||||||||||
Sbjct: 2664 gtacaatccctaaactaccagctggtgcagtatcccatccaagatg 2619



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>dbj|AB257218.1| Phragmites australis PhaHAK4 mRNA for potassium transporter, complete
            cds, strain: Nanpi
          Length = 2794

 Score =  178 bits (90), Expect = 1e-41
 Identities = 153/174 (87%)
 Strand = Plus / Minus

                                                                        
Query: 268  cgatcagaccatgtacgtcatccctacacgcatgatgttcgagtgaggcatcttcaaggt 327
            ||||||||||||||| ||||| || |||||||||||||| |||||||| | |||||  ||
Sbjct: 2588 cgatcagaccatgtatgtcataccgacacgcatgatgtttgagtgaggaaccttcagtgt 2529

                                                                        
Query: 328  tgcggtgccagccctgcagttcctcctcaggaaagcgtagaaatagttgatgatgaactt 387
            ||| |||||||||||||| |||||||| ||||| || ||||| ||||||||||| |||||
Sbjct: 2528 tgcagtgccagccctgcaattcctcctgaggaatgcatagaagtagttgatgataaactt 2469

                                                                  
Query: 388  ctttgtgaagaatgattgcttcctcgccctcacatcgccatgtgccaagagata 441
            |||  ||||||  |||| |||||||||||||||||||||||| |||||||||||
Sbjct: 2468 cttcatgaagagcgattccttcctcgccctcacatcgccatgggccaagagata 2415



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                          
Query: 174  gtacaatccctaaactacctgctggtgtagcattccatccaagatg 219
            ||||||||||||||||||| ||||||| || || ||||||||||||
Sbjct: 2664 gtacaatccctaaactaccagctggtgcagtatcccatccaagatg 2619



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>gb|AY111302.1| Zea mays CL24961_1 mRNA sequence
          Length = 637

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 38/39 (97%)
 Strand = Plus / Plus

                                                  
Query: 340 cctgcagttcctcctcaggaaagcgtagaaatagttgat 378
           |||||||||||||||||||||||| ||||||||||||||
Sbjct: 292 cctgcagttcctcctcaggaaagcatagaaatagttgat 330



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>dbj|AB257217.1| Phragmites australis PhaHAK4 mRNA for potassium transporter, complete
            cds, strain: Utsunomiya
          Length = 2484

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                           
Query: 269  gatcagaccatgtacgtcatccctacacgcatgatgttcgagtgagg 315
            |||||||||||||| ||||| || |||||||||||||| ||||||||
Sbjct: 2213 gatcagaccatgtatgtcataccgacacgcatgatgtttgagtgagg 2167



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                          
Query: 174  gtacaatccctaaactacctgctggtgtagcattccatccaagatg 219
            ||||||||||||||||||| |||||||||| || ||| ||||||||
Sbjct: 2290 gtacaatccctaaactaccagctggtgtagtatcccacccaagatg 2245



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                       
Query: 340      cctgcagttcctcctcaggaaagcgtagaaatagttgat 378
                ||||||||||||||||| ||| |||||||||||||||||
Sbjct: 19325595 cctgcagttcctcctcaagaaggcgtagaaatagttgat 19325633



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>dbj|AP005185.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0409B11
          Length = 168354

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                    
Query: 340   cctgcagttcctcctcaggaaagcgtagaaatagttgat 378
             ||||||||||||||||| ||| |||||||||||||||||
Sbjct: 15133 cctgcagttcctcctcaagaaggcgtagaaatagttgat 15171



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>dbj|AK106582.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-111-E03, full
            insert sequence
          Length = 1549

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                   
Query: 340  cctgcagttcctcctcaggaaagcgtagaaatagttgat 378
            ||||||||||||||||| ||| |||||||||||||||||
Sbjct: 1255 cctgcagttcctcctcaagaaggcgtagaaatagttgat 1217



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>dbj|AP003815.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1163_G04
          Length = 106253

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                     
Query: 340    cctgcagttcctcctcaggaaagcgtagaaatagttgat 378
              ||||||||||||||||| ||| |||||||||||||||||
Sbjct: 101821 cctgcagttcctcctcaagaaggcgtagaaatagttgat 101859



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>emb|BX005356.7| Zebrafish DNA sequence from clone CH211-255I20 in linkage group 14,
             complete sequence
          Length = 171108

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 8     attaaactgatatatttcttaa 29
             ||||||||||||||||||||||
Sbjct: 40044 attaaactgatatatttcttaa 40023



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>gb|AY485619.1| Cryphonectria parasitica DNA-dependent RNA polymerase II second
           largest subunit gene, partial cds
          Length = 2889

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 252 aggcgcagccgagccccgatc 272
           |||||||||||||||||||||
Sbjct: 63  aggcgcagccgagccccgatc 83



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>gb|AC158661.7| Mus musculus 6 BAC RP23-31E23 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 181763

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 71     gaaaatgttggcaagaataca 91
              |||||||||||||||||||||
Sbjct: 164192 gaaaatgttggcaagaataca 164212



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>gb|AC116703.10| Mus musculus chromosome 6, clone RP23-16O17, complete sequence
          Length = 202915

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 71    gaaaatgttggcaagaataca 91
             |||||||||||||||||||||
Sbjct: 10599 gaaaatgttggcaagaataca 10619



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>ref|NM_202821.1| Arabidopsis thaliana unknown protein AT4G14905 transcript variant
           AT4G14905.2 mRNA, complete cds
          Length = 1572

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 380 atgaacttctttgtgaagaatgat 403
           |||||||||||||||| |||||||
Sbjct: 670 atgaacttctttgtgatgaatgat 693



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>ref|NM_179056.1| Arabidopsis thaliana unknown protein AT4G14905 transcript variant
           AT4G14905.1 mRNA, complete cds
          Length = 1382

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 380 atgaacttctttgtgaagaatgat 403
           |||||||||||||||| |||||||
Sbjct: 677 atgaacttctttgtgatgaatgat 700



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>gb|AC121873.3| Mus musculus BAC clone RP24-123L3 from chromosome 19, complete sequence
          Length = 209035

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 339    ccctgcagttcctcctcagg 358
              ||||||||||||||||||||
Sbjct: 141121 ccctgcagttcctcctcagg 141140



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>gb|BC004099.1| Mus musculus aminolevulinic acid synthase 1, mRNA (cDNA clone
           IMAGE:3594325)
          Length = 941

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 376 gatgatgaacttctttgtgaagaa 399
           ||||||||||||||||||| ||||
Sbjct: 650 gatgatgaacttctttgtggagaa 673



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>emb|AJ276865.1|STU276865 Solanum tuberosum partial ure gene for urease (allelic form 1),
           exons 5-18
          Length = 11066

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 342 tgcagttcctcctcaggaaa 361
           ||||||||||||||||||||
Sbjct: 363 tgcagttcctcctcaggaaa 382



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>emb|AJ276864.1|STU276864 Solanum tuberosum partial adk gene for putative adenylate kinase and
            ure gene for urease (allelic form 2)
          Length = 18962

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 342  tgcagttcctcctcaggaaa 361
            ||||||||||||||||||||
Sbjct: 6444 tgcagttcctcctcaggaaa 6463



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>gb|AC002307.1|HUAC002307 Homo sapiens Chromosome 16 BAC clone CIT987-SK37914  ~complete genomic
              sequence, complete sequence
          Length = 161580

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 378    tgatgaacttctttgtgaag 397
              ||||||||||||||||||||
Sbjct: 124345 tgatgaacttctttgtgaag 124364



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>ref|XM_807160.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053506637.50) partial mRNA
          Length = 2391

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 379  gatgaacttctttgtgaaga 398
            ||||||||||||||||||||
Sbjct: 1559 gatgaacttctttgtgaaga 1540



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>gb|AC114938.3| Homo sapiens chromosome 16 clone CTD-2244D9, complete sequence
          Length = 166928

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 378  tgatgaacttctttgtgaag 397
            ||||||||||||||||||||
Sbjct: 6979 tgatgaacttctttgtgaag 6998



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>gb|U80439.1| Caenorhabditis elegans cosmid C01G8, complete sequence
          Length = 38487

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     agattaaactgatatatttc 25
             ||||||||||||||||||||
Sbjct: 11033 agattaaactgatatatttc 11014



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>gb|AC140915.6| Medicago truncatula clone mth2-10l24, complete sequence
          Length = 120364

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 72    aaaatgttggcaagaataca 91
             ||||||||||||||||||||
Sbjct: 39084 aaaatgttggcaagaataca 39065



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>gb|AY152836.1| Felis catus clone BAC 160a17 major histocompatiblity complex classical
              class II region, partial sequence
          Length = 130898

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 202    agcattccatccaagatgag 221
              ||||||||||||||||||||
Sbjct: 121714 agcattccatccaagatgag 121733



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>emb|Z97337.2|ATFCA2 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 2
          Length = 202860

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 380   atgaacttctttgtgaagaatgat 403
             |||||||||||||||| |||||||
Sbjct: 92395 atgaacttctttgtgatgaatgat 92372



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>gb|AC141070.2| Homo sapiens chromosome 16 clone RP11-171B13, complete sequence
          Length = 161261

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 378   tgatgaacttctttgtgaag 397
             ||||||||||||||||||||
Sbjct: 88148 tgatgaacttctttgtgaag 88167



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>gb|BC022110.1| Mus musculus aminolevulinic acid synthase 1, mRNA (cDNA clone
            MGC:36195 IMAGE:5133249), complete cds
          Length = 2142

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 376  gatgatgaacttctttgtgaagaa 399
            ||||||||||||||||||| ||||
Sbjct: 1839 gatgatgaacttctttgtggagaa 1862



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>gb|AC008500.7| Homo sapiens chromosome 5 clone CTC-439D5, complete sequence
          Length = 264095

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 51    aacttatcataaagttaacc 70
             ||||||||||||||||||||
Sbjct: 84910 aacttatcataaagttaacc 84891



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>gb|AC133569.4| Homo sapiens chromosome 16 clone RP11-96K14, complete sequence
          Length = 107932

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 378  tgatgaacttctttgtgaag 397
            ||||||||||||||||||||
Sbjct: 3934 tgatgaacttctttgtgaag 3953



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>emb|BX828408.1|CNS0A3RL Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH86ZC06 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1453

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 380 atgaacttctttgtgaagaatgat 403
           |||||||||||||||| |||||||
Sbjct: 619 atgaacttctttgtgatgaatgat 642



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>emb|BX828137.1|CNS0A3TK Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH56ZE09 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1545

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 380 atgaacttctttgtgaagaatgat 403
           |||||||||||||||| |||||||
Sbjct: 643 atgaacttctttgtgatgaatgat 666



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>gb|AC137800.3| Homo sapiens chromosome 16 clone RP11-652G5, complete sequence
          Length = 196550

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 378   tgatgaacttctttgtgaag 397
             ||||||||||||||||||||
Sbjct: 81422 tgatgaacttctttgtgaag 81403



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>gb|AC141293.2| Homo sapiens chromosome 16 clone RP11-51M16, complete sequence
          Length = 185339

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 378    tgatgaacttctttgtgaag 397
              ||||||||||||||||||||
Sbjct: 181406 tgatgaacttctttgtgaag 181387



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>gb|BT005320.1| Arabidopsis thaliana At4g14905 mRNA, complete cds
          Length = 1119

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 380 atgaacttctttgtgaagaatgat 403
           |||||||||||||||| |||||||
Sbjct: 670 atgaacttctttgtgatgaatgat 693



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>gb|AC139109.1| Homo sapiens chromosome 5 clone RP11-887F16, complete sequence
          Length = 167832

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 378   tgatgaacttctttgtgaag 397
             ||||||||||||||||||||
Sbjct: 64714 tgatgaacttctttgtgaag 64733



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>gb|AC136612.2| Homo sapiens chromosome 16 clone RP11-319D11, complete sequence
          Length = 221622

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 378    tgatgaacttctttgtgaag 397
              ||||||||||||||||||||
Sbjct: 151366 tgatgaacttctttgtgaag 151347



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>dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete genome
          Length = 3031430

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 383     aacttctttgtgaagaatga 402
               ||||||||||||||||||||
Sbjct: 2674389 aacttctttgtgaagaatga 2674370



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>dbj|AK117987.1| Arabidopsis thaliana mRNA for unknown protein, complete cds, clone:
           RAFL19-19-C01
          Length = 1381

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 380 atgaacttctttgtgaagaatgat 403
           |||||||||||||||| |||||||
Sbjct: 677 atgaacttctttgtgatgaatgat 700



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>emb|CR450781.12| Zebrafish DNA sequence from clone DKEY-20O6 in linkage group 24, complete
              sequence
          Length = 215010

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 20     tatttcttaataatgcaaat 39
              ||||||||||||||||||||
Sbjct: 185928 tatttcttaataatgcaaat 185909



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>gb|AC027354.3| Homo sapiens chromosome 16 clone RP11-179H7, complete sequence
          Length = 182046

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 378   tgatgaacttctttgtgaag 397
             ||||||||||||||||||||
Sbjct: 64714 tgatgaacttctttgtgaag 64733



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>emb|AL161540.2|ATCHRIV40 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 40
          Length = 197405

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 380   atgaacttctttgtgaagaatgat 403
             |||||||||||||||| |||||||
Sbjct: 37849 atgaacttctttgtgatgaatgat 37826



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>ref|NM_020559.1| Mus musculus aminolevulinic acid synthase 1 (Alas1), mRNA
          Length = 2142

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 376  gatgatgaacttctttgtgaagaa 399
            ||||||||||||||||||| ||||
Sbjct: 1839 gatgatgaacttctttgtggagaa 1862



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>gb|AC136625.2| Homo sapiens chromosome 16 clone RP11-554I17, complete sequence
          Length = 184294

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 378   tgatgaacttctttgtgaag 397
             ||||||||||||||||||||
Sbjct: 37560 tgatgaacttctttgtgaag 37541



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>gb|AC136437.2| Homo sapiens chromosome 16 clone RP11-347D23, complete sequence
          Length = 161397

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 378    tgatgaacttctttgtgaag 397
              ||||||||||||||||||||
Sbjct: 128678 tgatgaacttctttgtgaag 128697



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>gb|M63245.1|MUSALASH Mus musculus amino levulinate synthase (ALAS-H) mRNA, 3' end
          Length = 1448

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 376  gatgatgaacttctttgtgaagaa 399
            ||||||||||||||||||| ||||
Sbjct: 1190 gatgatgaacttctttgtggagaa 1213


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,595,218
Number of Sequences: 3902068
Number of extensions: 3595218
Number of successful extensions: 69858
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 69675
Number of HSP's gapped (non-prelim): 183
length of query: 441
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 419
effective length of database: 17,147,199,772
effective search space: 7184676704468
effective search space used: 7184676704468
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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