Clone Name | rbastl26e10 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_450750.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3085 Score = 198 bits (100), Expect = 1e-47 Identities = 157/176 (89%) Strand = Plus / Minus Query: 263 agccccgatcagaccatgtacgtcatccctacacgcatgatgttcgagtgaggcatcttc 322 |||||| |||| |||||||| |||||||| |||||||| |||||||||||||| | |||| Sbjct: 2749 agccccaatcacaccatgtatgtcatcccgacacgcataatgttcgagtgagggaccttc 2690 Query: 323 aaggttgcggtgccagccctgcagttcctcctcaggaaagcgtagaaatagttgatgatg 382 ||||||||||| ||||||||||| |||||||| ||||| |||||||| || ||||||||| Sbjct: 2689 aaggttgcggttccagccctgcaattcctcctgaggaacgcgtagaagtaattgatgatg 2630 Query: 383 aacttctttgtgaagaatgattgcttcctcgccctcacatcgccatgtgccaagag 438 |||||||| |||||||| |||| ||||||||||||||| || || ||||||||||| Sbjct: 2629 aacttcttcgtgaagaacgattccttcctcgccctcacgtcaccgtgtgccaagag 2574
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 198 bits (100), Expect = 1e-47 Identities = 157/176 (89%) Strand = Plus / Plus Query: 263 agccccgatcagaccatgtacgtcatccctacacgcatgatgttcgagtgaggcatcttc 322 |||||| |||| |||||||| |||||||| |||||||| |||||||||||||| | |||| Sbjct: 12609409 agccccaatcacaccatgtatgtcatcccgacacgcataatgttcgagtgagggaccttc 12609468 Query: 323 aaggttgcggtgccagccctgcagttcctcctcaggaaagcgtagaaatagttgatgatg 382 ||||||||||| ||||||||||| |||||||| ||||| |||||||| || ||||||||| Sbjct: 12609469 aaggttgcggttccagccctgcaattcctcctgaggaacgcgtagaagtaattgatgatg 12609528 Query: 383 aacttctttgtgaagaatgattgcttcctcgccctcacatcgccatgtgccaagag 438 |||||||| |||||||| |||| ||||||||||||||| || || ||||||||||| Sbjct: 12609529 aacttcttcgtgaagaacgattccttcctcgccctcacgtcaccgtgtgccaagag 12609584
>dbj|AP005838.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0041C07 Length = 179047 Score = 198 bits (100), Expect = 1e-47 Identities = 157/176 (89%) Strand = Plus / Plus Query: 263 agccccgatcagaccatgtacgtcatccctacacgcatgatgttcgagtgaggcatcttc 322 |||||| |||| |||||||| |||||||| |||||||| |||||||||||||| | |||| Sbjct: 75347 agccccaatcacaccatgtatgtcatcccgacacgcataatgttcgagtgagggaccttc 75406 Query: 323 aaggttgcggtgccagccctgcagttcctcctcaggaaagcgtagaaatagttgatgatg 382 ||||||||||| ||||||||||| |||||||| ||||| |||||||| || ||||||||| Sbjct: 75407 aaggttgcggttccagccctgcaattcctcctgaggaacgcgtagaagtaattgatgatg 75466 Query: 383 aacttctttgtgaagaatgattgcttcctcgccctcacatcgccatgtgccaagag 438 |||||||| |||||||| |||| ||||||||||||||| || || ||||||||||| Sbjct: 75467 aacttcttcgtgaagaacgattccttcctcgccctcacgtcaccgtgtgccaagag 75522
>dbj|AP005637.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0711A01 Length = 162400 Score = 198 bits (100), Expect = 1e-47 Identities = 157/176 (89%) Strand = Plus / Plus Query: 263 agccccgatcagaccatgtacgtcatccctacacgcatgatgttcgagtgaggcatcttc 322 |||||| |||| |||||||| |||||||| |||||||| |||||||||||||| | |||| Sbjct: 124736 agccccaatcacaccatgtatgtcatcccgacacgcataatgttcgagtgagggaccttc 124795 Query: 323 aaggttgcggtgccagccctgcagttcctcctcaggaaagcgtagaaatagttgatgatg 382 ||||||||||| ||||||||||| |||||||| ||||| |||||||| || ||||||||| Sbjct: 124796 aaggttgcggttccagccctgcaattcctcctgaggaacgcgtagaagtaattgatgatg 124855 Query: 383 aacttctttgtgaagaatgattgcttcctcgccctcacatcgccatgtgccaagag 438 |||||||| |||||||| |||| ||||||||||||||| || || ||||||||||| Sbjct: 124856 aacttcttcgtgaagaacgattccttcctcgccctcacgtcaccgtgtgccaagag 124911
>dbj|AK099766.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095A12, full insert sequence Length = 4054 Score = 198 bits (100), Expect = 1e-47 Identities = 157/176 (89%) Strand = Plus / Minus Query: 263 agccccgatcagaccatgtacgtcatccctacacgcatgatgttcgagtgaggcatcttc 322 |||||| |||| |||||||| |||||||| |||||||| |||||||||||||| | |||| Sbjct: 3748 agccccaatcacaccatgtatgtcatcccgacacgcataatgttcgagtgagggaccttc 3689 Query: 323 aaggttgcggtgccagccctgcagttcctcctcaggaaagcgtagaaatagttgatgatg 382 ||||||||||| ||||||||||| |||||||| ||||| |||||||| || ||||||||| Sbjct: 3688 aaggttgcggttccagccctgcaattcctcctgaggaacgcgtagaagtaattgatgatg 3629 Query: 383 aacttctttgtgaagaatgattgcttcctcgccctcacatcgccatgtgccaagag 438 |||||||| |||||||| |||| ||||||||||||||| || || ||||||||||| Sbjct: 3628 aacttcttcgtgaagaacgattccttcctcgccctcacgtcaccgtgtgccaagag 3573
>dbj|AK070831.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023063B21, full insert sequence Length = 3081 Score = 198 bits (100), Expect = 1e-47 Identities = 157/176 (89%) Strand = Plus / Minus Query: 263 agccccgatcagaccatgtacgtcatccctacacgcatgatgttcgagtgaggcatcttc 322 |||||| |||| |||||||| |||||||| |||||||| |||||||||||||| | |||| Sbjct: 2745 agccccaatcacaccatgtatgtcatcccgacacgcataatgttcgagtgagggaccttc 2686 Query: 323 aaggttgcggtgccagccctgcagttcctcctcaggaaagcgtagaaatagttgatgatg 382 ||||||||||| ||||||||||| |||||||| ||||| |||||||| || ||||||||| Sbjct: 2685 aaggttgcggttccagccctgcaattcctcctgaggaacgcgtagaagtaattgatgatg 2626 Query: 383 aacttctttgtgaagaatgattgcttcctcgccctcacatcgccatgtgccaagag 438 |||||||| |||||||| |||| ||||||||||||||| || || ||||||||||| Sbjct: 2625 aacttcttcgtgaagaacgattccttcctcgccctcacgtcaccgtgtgccaagag 2570
>gb|AY106754.1| Zea mays PCO067360 mRNA sequence Length = 1181 Score = 180 bits (91), Expect = 3e-42 Identities = 151/171 (88%) Strand = Plus / Minus Query: 271 tcagaccatgtacgtcatccctacacgcatgatgttcgagtgaggcatcttcaaggttgc 330 |||||||||||||||||| || ||||||||||||||||| || || | ||||| |||||| Sbjct: 884 tcagaccatgtacgtcataccaacacgcatgatgttcgaatgggggaccttcagggttgc 825 Query: 331 ggtgccagccctgcagttcctcctcaggaaagcgtagaaatagttgatgatgaacttctt 390 ||||| ||||||||||||||||| ||||| || |||||||||||||||| ||||||||| Sbjct: 824 agtgcccgccctgcagttcctcctgaggaacgcatagaaatagttgatgacgaacttctt 765 Query: 391 tgtgaagaatgattgcttcctcgccctcacatcgccatgtgccaagagata 441 ||||||| ||||| |||||||||||||||||| || ||||| | |||||| Sbjct: 764 cgtgaagactgattccttcctcgccctcacatctccgtgtgctaggagata 714
>dbj|AB257219.1| Phragmites australis PhaHAK4 mRNA for potassium transporter, complete cds, strain: Enchi Length = 2786 Score = 178 bits (90), Expect = 1e-41 Identities = 153/174 (87%) Strand = Plus / Minus Query: 268 cgatcagaccatgtacgtcatccctacacgcatgatgttcgagtgaggcatcttcaaggt 327 ||||||||||||||| ||||| || |||||||||||||| |||||||| | ||||| || Sbjct: 2588 cgatcagaccatgtatgtcataccgacacgcatgatgtttgagtgaggaaccttcagtgt 2529 Query: 328 tgcggtgccagccctgcagttcctcctcaggaaagcgtagaaatagttgatgatgaactt 387 ||| |||||||||||||| |||||||| ||||| || ||||| ||||||||||| ||||| Sbjct: 2528 tgcagtgccagccctgcaattcctcctgaggaatgcatagaagtagttgatgataaactt 2469 Query: 388 ctttgtgaagaatgattgcttcctcgccctcacatcgccatgtgccaagagata 441 ||| |||||| |||| |||||||||||||||||||||||| ||||||||||| Sbjct: 2468 cttcatgaagagcgattccttcctcgccctcacatcgccatgggccaagagata 2415 Score = 60.0 bits (30), Expect = 6e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 174 gtacaatccctaaactacctgctggtgtagcattccatccaagatg 219 ||||||||||||||||||| ||||||| || || |||||||||||| Sbjct: 2664 gtacaatccctaaactaccagctggtgcagtatcccatccaagatg 2619
>dbj|AB257218.1| Phragmites australis PhaHAK4 mRNA for potassium transporter, complete cds, strain: Nanpi Length = 2794 Score = 178 bits (90), Expect = 1e-41 Identities = 153/174 (87%) Strand = Plus / Minus Query: 268 cgatcagaccatgtacgtcatccctacacgcatgatgttcgagtgaggcatcttcaaggt 327 ||||||||||||||| ||||| || |||||||||||||| |||||||| | ||||| || Sbjct: 2588 cgatcagaccatgtatgtcataccgacacgcatgatgtttgagtgaggaaccttcagtgt 2529 Query: 328 tgcggtgccagccctgcagttcctcctcaggaaagcgtagaaatagttgatgatgaactt 387 ||| |||||||||||||| |||||||| ||||| || ||||| ||||||||||| ||||| Sbjct: 2528 tgcagtgccagccctgcaattcctcctgaggaatgcatagaagtagttgatgataaactt 2469 Query: 388 ctttgtgaagaatgattgcttcctcgccctcacatcgccatgtgccaagagata 441 ||| |||||| |||| |||||||||||||||||||||||| ||||||||||| Sbjct: 2468 cttcatgaagagcgattccttcctcgccctcacatcgccatgggccaagagata 2415 Score = 60.0 bits (30), Expect = 6e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 174 gtacaatccctaaactacctgctggtgtagcattccatccaagatg 219 ||||||||||||||||||| ||||||| || || |||||||||||| Sbjct: 2664 gtacaatccctaaactaccagctggtgcagtatcccatccaagatg 2619
>gb|AY111302.1| Zea mays CL24961_1 mRNA sequence Length = 637 Score = 69.9 bits (35), Expect = 7e-09 Identities = 38/39 (97%) Strand = Plus / Plus Query: 340 cctgcagttcctcctcaggaaagcgtagaaatagttgat 378 |||||||||||||||||||||||| |||||||||||||| Sbjct: 292 cctgcagttcctcctcaggaaagcatagaaatagttgat 330
>dbj|AB257217.1| Phragmites australis PhaHAK4 mRNA for potassium transporter, complete cds, strain: Utsunomiya Length = 2484 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 269 gatcagaccatgtacgtcatccctacacgcatgatgttcgagtgagg 315 |||||||||||||| ||||| || |||||||||||||| |||||||| Sbjct: 2213 gatcagaccatgtatgtcataccgacacgcatgatgtttgagtgagg 2167 Score = 60.0 bits (30), Expect = 6e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 174 gtacaatccctaaactacctgctggtgtagcattccatccaagatg 219 ||||||||||||||||||| |||||||||| || ||| |||||||| Sbjct: 2290 gtacaatccctaaactaccagctggtgtagtatcccacccaagatg 2245
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 340 cctgcagttcctcctcaggaaagcgtagaaatagttgat 378 ||||||||||||||||| ||| ||||||||||||||||| Sbjct: 19325595 cctgcagttcctcctcaagaaggcgtagaaatagttgat 19325633
>dbj|AP005185.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0409B11 Length = 168354 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 340 cctgcagttcctcctcaggaaagcgtagaaatagttgat 378 ||||||||||||||||| ||| ||||||||||||||||| Sbjct: 15133 cctgcagttcctcctcaagaaggcgtagaaatagttgat 15171
>dbj|AK106582.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-111-E03, full insert sequence Length = 1549 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 340 cctgcagttcctcctcaggaaagcgtagaaatagttgat 378 ||||||||||||||||| ||| ||||||||||||||||| Sbjct: 1255 cctgcagttcctcctcaagaaggcgtagaaatagttgat 1217
>dbj|AP003815.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1163_G04 Length = 106253 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 340 cctgcagttcctcctcaggaaagcgtagaaatagttgat 378 ||||||||||||||||| ||| ||||||||||||||||| Sbjct: 101821 cctgcagttcctcctcaagaaggcgtagaaatagttgat 101859
>emb|BX005356.7| Zebrafish DNA sequence from clone CH211-255I20 in linkage group 14, complete sequence Length = 171108 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 8 attaaactgatatatttcttaa 29 |||||||||||||||||||||| Sbjct: 40044 attaaactgatatatttcttaa 40023
>gb|AY485619.1| Cryphonectria parasitica DNA-dependent RNA polymerase II second largest subunit gene, partial cds Length = 2889 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 252 aggcgcagccgagccccgatc 272 ||||||||||||||||||||| Sbjct: 63 aggcgcagccgagccccgatc 83
>gb|AC158661.7| Mus musculus 6 BAC RP23-31E23 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 181763 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 71 gaaaatgttggcaagaataca 91 ||||||||||||||||||||| Sbjct: 164192 gaaaatgttggcaagaataca 164212
>gb|AC116703.10| Mus musculus chromosome 6, clone RP23-16O17, complete sequence Length = 202915 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 71 gaaaatgttggcaagaataca 91 ||||||||||||||||||||| Sbjct: 10599 gaaaatgttggcaagaataca 10619
>ref|NM_202821.1| Arabidopsis thaliana unknown protein AT4G14905 transcript variant AT4G14905.2 mRNA, complete cds Length = 1572 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 380 atgaacttctttgtgaagaatgat 403 |||||||||||||||| ||||||| Sbjct: 670 atgaacttctttgtgatgaatgat 693
>ref|NM_179056.1| Arabidopsis thaliana unknown protein AT4G14905 transcript variant AT4G14905.1 mRNA, complete cds Length = 1382 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 380 atgaacttctttgtgaagaatgat 403 |||||||||||||||| ||||||| Sbjct: 677 atgaacttctttgtgatgaatgat 700
>gb|AC121873.3| Mus musculus BAC clone RP24-123L3 from chromosome 19, complete sequence Length = 209035 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 ccctgcagttcctcctcagg 358 |||||||||||||||||||| Sbjct: 141121 ccctgcagttcctcctcagg 141140
>gb|BC004099.1| Mus musculus aminolevulinic acid synthase 1, mRNA (cDNA clone IMAGE:3594325) Length = 941 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 376 gatgatgaacttctttgtgaagaa 399 ||||||||||||||||||| |||| Sbjct: 650 gatgatgaacttctttgtggagaa 673
>emb|AJ276865.1|STU276865 Solanum tuberosum partial ure gene for urease (allelic form 1), exons 5-18 Length = 11066 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 tgcagttcctcctcaggaaa 361 |||||||||||||||||||| Sbjct: 363 tgcagttcctcctcaggaaa 382
>emb|AJ276864.1|STU276864 Solanum tuberosum partial adk gene for putative adenylate kinase and ure gene for urease (allelic form 2) Length = 18962 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 tgcagttcctcctcaggaaa 361 |||||||||||||||||||| Sbjct: 6444 tgcagttcctcctcaggaaa 6463
>gb|AC002307.1|HUAC002307 Homo sapiens Chromosome 16 BAC clone CIT987-SK37914 ~complete genomic sequence, complete sequence Length = 161580 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 tgatgaacttctttgtgaag 397 |||||||||||||||||||| Sbjct: 124345 tgatgaacttctttgtgaag 124364
>ref|XM_807160.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053506637.50) partial mRNA Length = 2391 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 379 gatgaacttctttgtgaaga 398 |||||||||||||||||||| Sbjct: 1559 gatgaacttctttgtgaaga 1540
>gb|AC114938.3| Homo sapiens chromosome 16 clone CTD-2244D9, complete sequence Length = 166928 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 tgatgaacttctttgtgaag 397 |||||||||||||||||||| Sbjct: 6979 tgatgaacttctttgtgaag 6998
>gb|U80439.1| Caenorhabditis elegans cosmid C01G8, complete sequence Length = 38487 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 agattaaactgatatatttc 25 |||||||||||||||||||| Sbjct: 11033 agattaaactgatatatttc 11014
>gb|AC140915.6| Medicago truncatula clone mth2-10l24, complete sequence Length = 120364 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 aaaatgttggcaagaataca 91 |||||||||||||||||||| Sbjct: 39084 aaaatgttggcaagaataca 39065
>gb|AY152836.1| Felis catus clone BAC 160a17 major histocompatiblity complex classical class II region, partial sequence Length = 130898 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 202 agcattccatccaagatgag 221 |||||||||||||||||||| Sbjct: 121714 agcattccatccaagatgag 121733
>emb|Z97337.2|ATFCA2 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 2 Length = 202860 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 380 atgaacttctttgtgaagaatgat 403 |||||||||||||||| ||||||| Sbjct: 92395 atgaacttctttgtgatgaatgat 92372
>gb|AC141070.2| Homo sapiens chromosome 16 clone RP11-171B13, complete sequence Length = 161261 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 tgatgaacttctttgtgaag 397 |||||||||||||||||||| Sbjct: 88148 tgatgaacttctttgtgaag 88167
>gb|BC022110.1| Mus musculus aminolevulinic acid synthase 1, mRNA (cDNA clone MGC:36195 IMAGE:5133249), complete cds Length = 2142 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 376 gatgatgaacttctttgtgaagaa 399 ||||||||||||||||||| |||| Sbjct: 1839 gatgatgaacttctttgtggagaa 1862
>gb|AC008500.7| Homo sapiens chromosome 5 clone CTC-439D5, complete sequence Length = 264095 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 aacttatcataaagttaacc 70 |||||||||||||||||||| Sbjct: 84910 aacttatcataaagttaacc 84891
>gb|AC133569.4| Homo sapiens chromosome 16 clone RP11-96K14, complete sequence Length = 107932 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 tgatgaacttctttgtgaag 397 |||||||||||||||||||| Sbjct: 3934 tgatgaacttctttgtgaag 3953
>emb|BX828408.1|CNS0A3RL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH86ZC06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1453 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 380 atgaacttctttgtgaagaatgat 403 |||||||||||||||| ||||||| Sbjct: 619 atgaacttctttgtgatgaatgat 642
>emb|BX828137.1|CNS0A3TK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH56ZE09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1545 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 380 atgaacttctttgtgaagaatgat 403 |||||||||||||||| ||||||| Sbjct: 643 atgaacttctttgtgatgaatgat 666
>gb|AC137800.3| Homo sapiens chromosome 16 clone RP11-652G5, complete sequence Length = 196550 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 tgatgaacttctttgtgaag 397 |||||||||||||||||||| Sbjct: 81422 tgatgaacttctttgtgaag 81403
>gb|AC141293.2| Homo sapiens chromosome 16 clone RP11-51M16, complete sequence Length = 185339 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 tgatgaacttctttgtgaag 397 |||||||||||||||||||| Sbjct: 181406 tgatgaacttctttgtgaag 181387
>gb|BT005320.1| Arabidopsis thaliana At4g14905 mRNA, complete cds Length = 1119 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 380 atgaacttctttgtgaagaatgat 403 |||||||||||||||| ||||||| Sbjct: 670 atgaacttctttgtgatgaatgat 693
>gb|AC139109.1| Homo sapiens chromosome 5 clone RP11-887F16, complete sequence Length = 167832 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 tgatgaacttctttgtgaag 397 |||||||||||||||||||| Sbjct: 64714 tgatgaacttctttgtgaag 64733
>gb|AC136612.2| Homo sapiens chromosome 16 clone RP11-319D11, complete sequence Length = 221622 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 tgatgaacttctttgtgaag 397 |||||||||||||||||||| Sbjct: 151366 tgatgaacttctttgtgaag 151347
>dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete genome Length = 3031430 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 383 aacttctttgtgaagaatga 402 |||||||||||||||||||| Sbjct: 2674389 aacttctttgtgaagaatga 2674370
>dbj|AK117987.1| Arabidopsis thaliana mRNA for unknown protein, complete cds, clone: RAFL19-19-C01 Length = 1381 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 380 atgaacttctttgtgaagaatgat 403 |||||||||||||||| ||||||| Sbjct: 677 atgaacttctttgtgatgaatgat 700
>emb|CR450781.12| Zebrafish DNA sequence from clone DKEY-20O6 in linkage group 24, complete sequence Length = 215010 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 tatttcttaataatgcaaat 39 |||||||||||||||||||| Sbjct: 185928 tatttcttaataatgcaaat 185909
>gb|AC027354.3| Homo sapiens chromosome 16 clone RP11-179H7, complete sequence Length = 182046 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 tgatgaacttctttgtgaag 397 |||||||||||||||||||| Sbjct: 64714 tgatgaacttctttgtgaag 64733
>emb|AL161540.2|ATCHRIV40 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 40 Length = 197405 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 380 atgaacttctttgtgaagaatgat 403 |||||||||||||||| ||||||| Sbjct: 37849 atgaacttctttgtgatgaatgat 37826
>ref|NM_020559.1| Mus musculus aminolevulinic acid synthase 1 (Alas1), mRNA Length = 2142 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 376 gatgatgaacttctttgtgaagaa 399 ||||||||||||||||||| |||| Sbjct: 1839 gatgatgaacttctttgtggagaa 1862
>gb|AC136625.2| Homo sapiens chromosome 16 clone RP11-554I17, complete sequence Length = 184294 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 tgatgaacttctttgtgaag 397 |||||||||||||||||||| Sbjct: 37560 tgatgaacttctttgtgaag 37541
>gb|AC136437.2| Homo sapiens chromosome 16 clone RP11-347D23, complete sequence Length = 161397 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 tgatgaacttctttgtgaag 397 |||||||||||||||||||| Sbjct: 128678 tgatgaacttctttgtgaag 128697
>gb|M63245.1|MUSALASH Mus musculus amino levulinate synthase (ALAS-H) mRNA, 3' end Length = 1448 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 376 gatgatgaacttctttgtgaagaa 399 ||||||||||||||||||| |||| Sbjct: 1190 gatgatgaacttctttgtggagaa 1213 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,595,218 Number of Sequences: 3902068 Number of extensions: 3595218 Number of successful extensions: 69858 Number of sequences better than 10.0: 52 Number of HSP's better than 10.0 without gapping: 52 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 69675 Number of HSP's gapped (non-prelim): 183 length of query: 441 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 419 effective length of database: 17,147,199,772 effective search space: 7184676704468 effective search space used: 7184676704468 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)