ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl26e03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1APRR9_ARATH (Q8L500) Two-component response regulator-like APRR9... 30 2.7

>APRR9_ARATH (Q8L500) Two-component response regulator-like APRR9|
           (Pseudo-response regulator 9)
          Length = 468

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -2

Query: 399 PTRKKNSANLYRHMWASMSRRSPPAKMATSAP 304
           P RK    NL++H+W  ++ R  P   A S P
Sbjct: 142 PMRKNELKNLWQHVWRRLTLRDDPTAHAQSLP 173


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,743,773
Number of Sequences: 219361
Number of extensions: 1125154
Number of successful extensions: 3047
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 3009
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3044
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2618960580
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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