Clone Name | rbastl26e03 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_479973.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3689 Score = 81.8 bits (41), Expect = 2e-12 Identities = 80/93 (86%) Strand = Plus / Minus Query: 341 cttgacatacttgcccacatatgcctgtacaagtttgctgagtttttctttcgagtagga 400 |||| |||||||||| ||||||||||| || |||||| | || |||||| | |||||||| Sbjct: 3198 cttggcatacttgccaacatatgcctggacgagtttgtttagcttttctctggagtagga 3139 Query: 401 catgtagacatcgatcttctcttttgttggagg 433 |||||| | ||| ||||||||||||||| |||| Sbjct: 3138 catgtaaatatcaatcttctcttttgtttgagg 3106
>dbj|AK111729.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038J07, full insert sequence Length = 2390 Score = 81.8 bits (41), Expect = 2e-12 Identities = 80/93 (86%) Strand = Plus / Minus Query: 341 cttgacatacttgcccacatatgcctgtacaagtttgctgagtttttctttcgagtagga 400 |||| |||||||||| ||||||||||| || |||||| | || |||||| | |||||||| Sbjct: 2034 cttggcatacttgccaacatatgcctggacgagtttgtttagcttttctctggagtagga 1975 Query: 401 catgtagacatcgatcttctcttttgttggagg 433 |||||| | ||| ||||||||||||||| |||| Sbjct: 1974 catgtaaatatcaatcttctcttttgtttgagg 1942
>dbj|AK100455.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023091E18, full insert sequence Length = 3689 Score = 81.8 bits (41), Expect = 2e-12 Identities = 80/93 (86%) Strand = Plus / Minus Query: 341 cttgacatacttgcccacatatgcctgtacaagtttgctgagtttttctttcgagtagga 400 |||| |||||||||| ||||||||||| || |||||| | || |||||| | |||||||| Sbjct: 3198 cttggcatacttgccaacatatgcctggacgagtttgtttagcttttctctggagtagga 3139 Query: 401 catgtagacatcgatcttctcttttgttggagg 433 |||||| | ||| ||||||||||||||| |||| Sbjct: 3138 catgtaaatatcaatcttctcttttgtttgagg 3106
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 384 ttttctttcgagtaggacatgtagacatcgatcttctcttttgttggagg 433 |||||| | |||||||||||||| | ||| ||||||||||||||| |||| Sbjct: 2019662 ttttctctggagtaggacatgtaaatatcaatcttctcttttgtttgagg 2019613
>dbj|AP003896.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1613_G04 Length = 135357 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 384 ttttctttcgagtaggacatgtagacatcgatcttctcttttgttggagg 433 |||||| | |||||||||||||| | ||| ||||||||||||||| |||| Sbjct: 13192 ttttctctggagtaggacatgtaaatatcaatcttctcttttgtttgagg 13143
>dbj|AP005620.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0680F05 Length = 185495 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 384 ttttctttcgagtaggacatgtagacatcgatcttctcttttgttggagg 433 |||||| | |||||||||||||| | ||| ||||||||||||||| |||| Sbjct: 144860 ttttctctggagtaggacatgtaaatatcaatcttctcttttgtttgagg 144811
>gb|AY555143.1| Zea may BAC clone c573L14, complete sequence Length = 144792 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 393 gagtaggacatgtagacatcgatcttctcttttgttggagggatgttctc 442 ||||||| ||||||||| ||||||||||| || || |||||| ||||||| Sbjct: 78116 gagtaggtcatgtagacgtcgatcttctccttggtcggaggggtgttctc 78165
>gb|AF466200.2| Sorghum bicolor putative protein kinase gene, partial cds; putative Cf-2, fertilization-independent endosperm proteins, hypothetical protein, putative non-LTR retroelement reverse transcriptase, OCL5 protein, tryptophan synthase beta-subunit, hypothetical proteins, putative AP endonuclease, putative RNA polymerase II complex component SRB7, putative beta-1,3-glucanase, hypothetical protein, TNP2-like protein, hypothetical protein, putative phosphate/phosphoenolpyruvate translocator, putative protein, hypothetical proteins, putative galactosyltransferase family, hypothetical protein, putative cytochrome P450 family, putative lipid transfer protein, putative photoreceptor-interacting protein, and hypothetical protein genes, complete cds; and hypothetical protein gene, partial cds Length = 202197 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 336 tacgccttgacatacttgcccacatatgcctgt 368 ||||||||| |||||||||| |||||||||||| Sbjct: 86800 tacgccttggcatacttgccaacatatgcctgt 86832
>gb|AC084550.1|CBRG33D04 Caenorhabditis briggsae cosmid G33D04, complete sequence Length = 39089 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 171 aaaagaagaagacgatgatgat 192 |||||||||||||||||||||| Sbjct: 22066 aaaagaagaagacgatgatgat 22087
>gb|AC160469.5| Mus musculus chromosome 5, clone RP23-318I19, complete sequence Length = 221860 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 171 aaaagaagaagacgatgatga 191 ||||||||||||||||||||| Sbjct: 101524 aaaagaagaagacgatgatga 101504
>ref|XM_806444.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053506579.110) partial mRNA Length = 2934 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 171 aaaagaagaagacgatgatga 191 ||||||||||||||||||||| Sbjct: 2142 aaaagaagaagacgatgatga 2122
>ref|XM_804760.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053504881.10) partial mRNA Length = 1085 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 171 aaaagaagaagacgatgatga 191 ||||||||||||||||||||| Sbjct: 293 aaaagaagaagacgatgatga 273
>ref|XM_650061.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (35.t00001) partial mRNA Length = 1488 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 aaagaagaagacgatgatgat 192 ||||||||||||||||||||| Sbjct: 1423 aaagaagaagacgatgatgat 1443
>ref|XM_650395.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (28.t00015) partial mRNA Length = 1452 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 aaagaagaagacgatgatgat 192 ||||||||||||||||||||| Sbjct: 1387 aaagaagaagacgatgatgat 1407
>emb|AL035689.26|HS187J11 Human DNA sequence from clone RP1-187J11 on chromosome 6q11.1-22.33 Contains the 3' part of the gene for endoplasmic reticulum associated protein 140 kDa (ERAP140) (similar to nucleolar protein C7B), the gene for a novel protein similar to protein kinase C inhibitors, the gene for MDS024 protein and two putative CpG islands, complete sequence Length = 144364 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 224 tgaaacagaacaaaaagaaac 244 ||||||||||||||||||||| Sbjct: 81232 tgaaacagaacaaaaagaaac 81252
>gb|AC032044.28| Homo sapiens chromosome 17, clone RP11-818O24, complete sequence Length = 199656 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 172 aaagaagaagacgatgatgat 192 ||||||||||||||||||||| Sbjct: 155318 aaagaagaagacgatgatgat 155338
>emb|BX901884.7| Zebrafish DNA sequence from clone DKEY-89E13 in linkage group 4, complete sequence Length = 137389 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 221 gcctgaaacagaacaaaaagaaacc 245 |||||||||||| |||||||||||| Sbjct: 65357 gcctgaaacagagcaaaaagaaacc 65333
>dbj|AB108682.1| Streptomyces griseus sigF, sigL genes for sigma F, sigma L, comeplete cds Length = 2377 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 226 aaacagaacaaaaagaaaccc 246 ||||||||||||||||||||| Sbjct: 106 aaacagaacaaaaagaaaccc 86
>gb|AC108848.12| Mus musculus chromosome 5, clone RP23-300K5, complete sequence Length = 231380 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 171 aaaagaagaagacgatgatga 191 ||||||||||||||||||||| Sbjct: 212558 aaaagaagaagacgatgatga 212578
>ref|NM_001036951.1| Arabidopsis thaliana acetyl-CoA C-acetyltransferase AT5G47720 transcript variant AT5G47720.5 mRNA, complete cds Length = 2167 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 ctgaaacagaacaaaaagaa 242 |||||||||||||||||||| Sbjct: 185 ctgaaacagaacaaaaagaa 166
>ref|NM_128212.2| Arabidopsis thaliana HO2; heme oxygenase (decyclizing) AT2G26550 (HO2) mRNA, complete cds Length = 1065 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 aagaagaagacgatgatgat 192 |||||||||||||||||||| Sbjct: 332 aagaagaagacgatgatgat 351
>ref|NM_105853.3| Arabidopsis thaliana unknown protein AT1G71950 mRNA, complete cds Length = 720 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 aagaagaagacgatgatgat 192 |||||||||||||||||||| Sbjct: 99 aagaagaagacgatgatgat 80
>ref|NM_125538.2| Arabidopsis thaliana unknown protein AT5G61450 mRNA, complete cds Length = 1614 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 aagaagaagacgatgatgat 192 |||||||||||||||||||| Sbjct: 100 aagaagaagacgatgatgat 81
>ref|XM_513663.1| PREDICTED: Pan troglodytes lymphoid-specific protein tyrosine phosphatase (LOC457136), mRNA Length = 2678 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 418 tctcttttgttggagggatgttct 441 ||||||||||| |||||||||||| Sbjct: 1294 tctcttttgtttgagggatgttct 1317
>gb|AC024776.1| Caenorhabditis elegans cosmid Y41D4B, complete sequence Length = 138020 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 tacttgcccacatatgcctg 367 |||||||||||||||||||| Sbjct: 132579 tacttgcccacatatgcctg 132560
>ref|NM_012411.2| Homo sapiens protein tyrosine phosphatase, non-receptor type 22 (lymphoid) (PTPN22), transcript variant 2, mRNA Length = 2289 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 418 tctcttttgttggagggatgttct 441 ||||||||||| |||||||||||| Sbjct: 1327 tctcttttgtttgagggatgttct 1350
>ref|NM_015967.3| Homo sapiens protein tyrosine phosphatase, non-receptor type 22 (lymphoid) (PTPN22), transcript variant 1, mRNA Length = 3615 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 418 tctcttttgttggagggatgttct 441 ||||||||||| |||||||||||| Sbjct: 1344 tctcttttgtttgagggatgttct 1367
>gb|BC071670.1| Homo sapiens protein tyrosine phosphatase, non-receptor type 22 (lymphoid), mRNA (cDNA clone MGC:87871 IMAGE:5497108), complete cds Length = 3436 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 418 tctcttttgttggagggatgttct 441 ||||||||||| |||||||||||| Sbjct: 1165 tctcttttgtttgagggatgttct 1188
>ref|XM_714735.1| Candida albicans SC5314 hypothetical protein (CaO19_6729), mRNA Length = 3726 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 aagaagaagacgatgatgat 192 |||||||||||||||||||| Sbjct: 995 aagaagaagacgatgatgat 1014
>ref|XM_714618.1| Candida albicans SC5314 hypothetical protein (CaO19_14021), mRNA Length = 3726 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 aagaagaagacgatgatgat 192 |||||||||||||||||||| Sbjct: 995 aagaagaagacgatgatgat 1014
>ref|XM_705894.1| Candida albicans SC5314 myosin type 1 (CaO19.738), mRNA Length = 3951 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 aagaagaagacgatgatgat 192 |||||||||||||||||||| Sbjct: 3926 aagaagaagacgatgatgat 3945
>ref|XM_705881.1| Candida albicans SC5314 myosin type 1 (CaO19.8357), mRNA Length = 3969 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 aagaagaagacgatgatgat 192 |||||||||||||||||||| Sbjct: 3944 aagaagaagacgatgatgat 3963
>gb|AY812265.1| Schistosoma japonicum SJCHGC08306 protein mRNA, partial cds Length = 578 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 aagaagaagacgatgatgat 192 |||||||||||||||||||| Sbjct: 88 aagaagaagacgatgatgat 69
>gb|AY915751.1| Schistosoma japonicum SJCHGC09665 protein mRNA, partial cds Length = 683 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 aagaagaagacgatgatgat 192 |||||||||||||||||||| Sbjct: 211 aagaagaagacgatgatgat 192
>gb|AC084196.1| Caenorhabditis elegans cosmid Y55D5A, complete sequence Length = 86523 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 agaagaagacgatgatgata 193 |||||||||||||||||||| Sbjct: 61610 agaagaagacgatgatgata 61591
>gb|BC045402.1| Danio rerio novel nuclear protein 1, mRNA (cDNA clone IMAGE:2644274), partial cds Length = 2358 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 aagaagaagacgatgatgat 192 |||||||||||||||||||| Sbjct: 1612 aagaagaagacgatgatgat 1631
>ref|XM_647474.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (114.t00013) partial mRNA Length = 1452 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 aagaagaagacgatgatgat 192 |||||||||||||||||||| Sbjct: 1415 aagaagaagacgatgatgat 1434
>ref|XM_647710.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (104.t00009) partial mRNA Length = 312 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 aagaagaagacgatgatgat 192 |||||||||||||||||||| Sbjct: 185 aagaagaagacgatgatgat 204
>ref|XM_647729.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (104.t00004) partial mRNA Length = 825 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 aagaagaagacgatgatgat 192 |||||||||||||||||||| Sbjct: 368 aagaagaagacgatgatgat 387
>ref|XM_946666.1| Theileria annulata strain Ankara hypothetical protein (TA16050) partial mRNA Length = 15786 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 agaagaagacgatgatgata 193 |||||||||||||||||||| Sbjct: 3606 agaagaagacgatgatgata 3625
>ref|XM_947612.1| Theileria annulata strain Ankara hypothetical protein (TA17115) partial mRNA Length = 14658 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 agaagaagacgatgatgata 193 |||||||||||||||||||| Sbjct: 3612 agaagaagacgatgatgata 3631
>ref|XM_660261.1| Cryptosporidium hominis TU502 HECT-domain (Chro.70558) partial mRNA Length = 1506 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 aagaagaagacgatgatgat 192 |||||||||||||||||||| Sbjct: 379 aagaagaagacgatgatgat 360
>gb|AC144478.20| Medicago truncatula clone mth2-20b20, complete sequence Length = 144248 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 168 tacaaaagaagaagacgatgatgataca 195 |||| |||||||||| |||||||||||| Sbjct: 49621 tacacaagaagaagaagatgatgataca 49648
>emb|AL137856.24| Human DNA sequence from clone RP5-1073O3 on chromosome 1p13.1-13.3 Contains the 5' end of the gene for a novel protein (FLJ11220 and FLJ12104), the PTPN22 gene for protein tyrosine phosphatase non-receptor type 22 (lymphoid), the gene for a novel protein, the AP4B1 gene for adaptor-related protein complex 4 beta 1 subunit, the DCLRE1B gene for DNA cross-link repair 1B (PSO2 homolog, S. cerevisiae), three novel genes, the 5' end of the HIPK1 gene for homeodomain interacting protein kinase 1 and three CpG islands, complete sequence Length = 143618 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 418 tctcttttgttggagggatgttct 441 ||||||||||| |||||||||||| Sbjct: 45232 tctcttttgtttgagggatgttct 45209
>emb|Z47816.1|SC9827 S.cerevisiae chromosome XIII cosmid 9827 Length = 20668 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 aagaagaagacgatgatgat 192 |||||||||||||||||||| Sbjct: 3980 aagaagaagacgatgatgat 3961
>gb|U50184.1| Caenorhabditis elegans cosmid W03A3, complete sequence Length = 14968 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 aagaagaagacgatgatgat 192 |||||||||||||||||||| Sbjct: 8314 aagaagaagacgatgatgat 8295
>emb|AL161534.2|ATCHRIV34 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 34 Length = 196107 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 aagaagaagacgatgatgat 192 |||||||||||||||||||| Sbjct: 134435 aagaagaagacgatgatgat 134454
>emb|AL049730.2|ATT1P17 Arabidopsis thaliana DNA chromosome 4, BAC clone T1P17 (ESSA project) Length = 137519 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 aagaagaagacgatgatgat 192 |||||||||||||||||||| Sbjct: 129903 aagaagaagacgatgatgat 129922
>dbj|AK128828.1| Homo sapiens cDNA FLJ46308 fis, clone TESTI4039575, weakly similar to Telomeric repeat binding factor 1 Length = 3558 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 ctgaaacagaacaaaaagaa 242 |||||||||||||||||||| Sbjct: 1794 ctgaaacagaacaaaaagaa 1813
>gb|U94739.1| Acanthamoeba lenticulata strain Jc-1 18S small subunit ribosomal RNA gene, partial sequence Length = 2992 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 169 acaaaagaagaagacgatgatgat 192 |||||||||||||| ||||||||| Sbjct: 2135 acaaaagaagaagatgatgatgat 2158
>gb|AC002505.3| Arabidopsis thaliana chromosome 2 clone T9J22 map B68, complete sequence Length = 115851 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 aagaagaagacgatgatgat 192 |||||||||||||||||||| Sbjct: 78760 aagaagaagacgatgatgat 78741
>gb|AC092846.5| Homo sapiens BAC clone RP11-617A17 from 4, complete sequence Length = 197540 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 tgttgtacaaaagaagaaga 182 |||||||||||||||||||| Sbjct: 54225 tgttgtacaaaagaagaaga 54244
>gb|AY734955.1| Rhagoletis pomonella clone 71 microsatellite sequence Length = 397 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 aaaagaagaagacgatgatg 190 |||||||||||||||||||| Sbjct: 302 aaaagaagaagacgatgatg 321
>gb|AC022893.6| Homo sapiens chromosome 8, clone RP11-531A24, complete sequence Length = 175229 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 ctgaaacagaacaaaaagaa 242 |||||||||||||||||||| Sbjct: 69824 ctgaaacagaacaaaaagaa 69805
>gb|AF001847.1|AF001847 Homo sapiens lymphoid phosphatase LyP2 mRNA, complete cds Length = 2356 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 418 tctcttttgttggagggatgttct 441 ||||||||||| |||||||||||| Sbjct: 1299 tctcttttgtttgagggatgttct 1322
>gb|AF001846.1|AF001846 Homo sapiens lymphoid phosphatase LyP1 mRNA, complete cds Length = 3058 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 418 tctcttttgttggagggatgttct 441 ||||||||||| |||||||||||| Sbjct: 1299 tctcttttgtttgagggatgttct 1322
>gb|AF387009.1|AF387009 Arabidopsis thaliana Unknown protein (MCI2.1) mRNA, complete cds Length = 1615 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 aagaagaagacgatgatgat 192 |||||||||||||||||||| Sbjct: 100 aagaagaagacgatgatgat 81
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 caagtttgctgagtttttct 389 |||||||||||||||||||| Sbjct: 15160759 caagtttgctgagtttttct 15160778
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 aagaagaagacgatgatgat 192 |||||||||||||||||||| Sbjct: 39607499 aagaagaagacgatgatgat 39607518
>emb|BX817994.1|CNS0AED2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL55ZE07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 505 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 aagaagaagacgatgatgat 192 |||||||||||||||||||| Sbjct: 26 aagaagaagacgatgatgat 7
>emb|BX815875.1|CNS0ADFL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH14ZD06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1172 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 aagaagaagacgatgatgat 192 |||||||||||||||||||| Sbjct: 23 aagaagaagacgatgatgat 4
>emb|BX818290.1|CNS0AAQG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL71ZA11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 642 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 aagaagaagacgatgatgat 192 |||||||||||||||||||| Sbjct: 21 aagaagaagacgatgatgat 2
>emb|BX830189.1|CNS0A1CC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB65ZB04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1545 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 aagaagaagacgatgatgat 192 |||||||||||||||||||| Sbjct: 75 aagaagaagacgatgatgat 56
>emb|BX829926.1|CNS0A1HG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB46ZF02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1496 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 aagaagaagacgatgatgat 192 |||||||||||||||||||| Sbjct: 32 aagaagaagacgatgatgat 13
>emb|BX832010.1|CNS0A11N Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH45ZH06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1527 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 aagaagaagacgatgatgat 192 |||||||||||||||||||| Sbjct: 58 aagaagaagacgatgatgat 39
>dbj|AB073399.2| Tetragenococcus halophilus groESL operon (cpn10, cpn60 genes), complete sequence Length = 2836 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 ctgaaacagaacaaaaagaa 242 |||||||||||||||||||| Sbjct: 1893 ctgaaacagaacaaaaagaa 1912
>gb|AC021665.7|AC021665 Arabidopsis thaliana chromosome 1 BAC F17M19 genomic sequence, complete sequence Length = 80413 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 aagaagaagacgatgatgat 192 |||||||||||||||||||| Sbjct: 53853 aagaagaagacgatgatgat 53872
>gb|AC084543.1|CBRG28M02 Caenorhabditis briggsae cosmid G28M02, complete sequence Length = 44796 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 acaaaagaagaagacgatga 188 |||||||||||||||||||| Sbjct: 18962 acaaaagaagaagacgatga 18981
>dbj|AP003416.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0456E05 Length = 173699 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 aagaagaagacgatgatgat 192 |||||||||||||||||||| Sbjct: 88455 aagaagaagacgatgatgat 88474
>gb|BT004754.1| Arabidopsis thaliana At1g71950 gene, complete cds Length = 411 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 aagaagaagacgatgatgat 192 |||||||||||||||||||| Sbjct: 59 aagaagaagacgatgatgat 40
>gb|AY087697.1| Arabidopsis thaliana clone 37751 mRNA, complete sequence Length = 585 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 aagaagaagacgatgatgat 192 |||||||||||||||||||| Sbjct: 99 aagaagaagacgatgatgat 80
>dbj|AP005579.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1740_D06 Length = 187410 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 caagtttgctgagtttttct 389 |||||||||||||||||||| Sbjct: 54735 caagtttgctgagtttttct 54754
>emb|BX510362.9| Mouse DNA sequence from clone RP23-371L4 on chromosome 2, complete sequence Length = 98800 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 aagtcaagttctagcacatg 48 |||||||||||||||||||| Sbjct: 95914 aagtcaagttctagcacatg 95895
>dbj|AB016887.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MCI2 Length = 15607 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 aagaagaagacgatgatgat 192 |||||||||||||||||||| Sbjct: 3028 aagaagaagacgatgatgat 3047
>dbj|AB016886.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MCA23 Length = 82503 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 ctgaaacagaacaaaaagaa 242 |||||||||||||||||||| Sbjct: 9074 ctgaaacagaacaaaaagaa 9055
>dbj|AK068178.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130C02, full insert sequence Length = 1312 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 aagaagaagacgatgatgat 192 |||||||||||||||||||| Sbjct: 100 aagaagaagacgatgatgat 81
>dbj|AK059290.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-E02, full insert sequence Length = 1181 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 caagtttgctgagtttttct 389 |||||||||||||||||||| Sbjct: 58 caagtttgctgagtttttct 39
>gb|AF132477.1|AF132477 Arabidopsis thaliana cultivar Col-0 heme oxygenase 2 (HO2) gene, nuclear gene encoding chloroplast protein, complete cds Length = 4672 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 aagaagaagacgatgatgat 192 |||||||||||||||||||| Sbjct: 821 aagaagaagacgatgatgat 840
>gb|AC149351.2| Phakopsora pachyrhizi clone JGIAFNA-33E19, complete sequence Length = 35432 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 aagaagaagacgatgatgat 192 |||||||||||||||||||| Sbjct: 19293 aagaagaagacgatgatgat 19312
>gb|AC145797.2| Xenopus tropicalis clone CH216-22B13, complete sequence Length = 142988 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 230 agaacaaaaagaaacccttgccac 253 |||||| ||||||||||||||||| Sbjct: 9604 agaacacaaagaaacccttgccac 9627
>gb|BT001154.1| Arabidopsis thaliana Unknown protein (At5g61450) mRNA, complete cds Length = 1490 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 aagaagaagacgatgatgat 192 |||||||||||||||||||| Sbjct: 37 aagaagaagacgatgatgat 18
>gb|M77282.1|DROSIAB Drosophila virilis SEVEN IN ABSENTIA (seven in absentia) gene, complete cds Length = 1762 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 aagaagaagacgatgatgat 192 |||||||||||||||||||| Sbjct: 1460 aagaagaagacgatgatgat 1479 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,471,998 Number of Sequences: 3902068 Number of extensions: 4471998 Number of successful extensions: 107435 Number of sequences better than 10.0: 82 Number of HSP's better than 10.0 without gapping: 82 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 107220 Number of HSP's gapped (non-prelim): 215 length of query: 445 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 423 effective length of database: 17,147,199,772 effective search space: 7253265503556 effective search space used: 7253265503556 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)