ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl26d10 |
|---|---|
| Clone Library Name | barley_pub |
>AKH2_MAIZE (P49080) Bifunctional aspartokinase/homoserine dehydrogenase 2,| chloroplast precursor (AK-HD 2) (AK-HSDH 2) [Includes: Aspartokinase (EC 2.7.2.4); Homoserine dehydrogenase (EC 1.1.1.3)] Length = 917 Score = 100 bits (250), Expect = 6e-22 Identities = 49/49 (100%), Positives = 49/49 (100%) Frame = -1 Query: 411 GSDNIIAFTTSRYKEQPLIVRGPGAGAEVTAGGVFCDILRLASYLGAPS 265 GSDNIIAFTTSRYKEQPLIVRGPGAGAEVTAGGVFCDILRLASYLGAPS Sbjct: 869 GSDNIIAFTTSRYKEQPLIVRGPGAGAEVTAGGVFCDILRLASYLGAPS 917
>AKH1_MAIZE (P49079) Bifunctional aspartokinase/homoserine dehydrogenase 1,| chloroplast precursor (AK-HD 1) (AK-HSDH 1) [Includes: Aspartokinase (EC 2.7.2.4); Homoserine dehydrogenase (EC 1.1.1.3)] Length = 920 Score = 98.6 bits (244), Expect = 3e-21 Identities = 47/49 (95%), Positives = 49/49 (100%) Frame = -1 Query: 411 GSDNIIAFTTSRYKEQPLIVRGPGAGAEVTAGGVFCDILRLASYLGAPS 265 GSDNIIAFTTSRYK+QPLIVRGPGAGAEVTAGGVFCDILRL+SYLGAPS Sbjct: 872 GSDNIIAFTTSRYKDQPLIVRGPGAGAEVTAGGVFCDILRLSSYLGAPS 920
>AKH_DAUCA (P37142) Bifunctional aspartokinase/homoserine dehydrogenase,| chloroplast precursor (AK-HD) (AK-HSDH) [Includes: Aspartokinase (EC 2.7.2.4); Homoserine dehydrogenase (EC 1.1.1.3)] (Fragment) Length = 921 Score = 86.3 bits (212), Expect = 2e-17 Identities = 42/49 (85%), Positives = 44/49 (89%) Frame = -1 Query: 411 GSDNIIAFTTSRYKEQPLIVRGPGAGAEVTAGGVFCDILRLASYLGAPS 265 GSDNI AFTT RY +QP I+RGPGAGAEVTAGGVF DILRLASYLGAPS Sbjct: 873 GSDNINAFTTERYNKQPPIIRGPGAGAEVTAGGVFSDILRLASYLGAPS 921
>DHOM_SCHPO (O94671) Probable homoserine dehydrogenase (EC 1.1.1.3) (HDH)| Length = 376 Score = 54.3 bits (129), Expect = 7e-08 Identities = 26/46 (56%), Positives = 34/46 (73%) Frame = -1 Query: 408 SDNIIAFTTSRYKEQPLIVRGPGAGAEVTAGGVFCDILRLASYLGA 271 SDNII+FTT RY +PL+V G GAGA VTA GV D++++ S + A Sbjct: 325 SDNIISFTTKRYHTRPLVVIGAGAGAAVTAAGVLGDMIKIMSQVRA 370
>AK2H_ECOLI (P00562) Bifunctional aspartokinase/homoserine dehydrogenase II| (AKII-HDII) [Includes: Aspartokinase II (EC 2.7.2.4); Homoserine dehydrogenase II (EC 1.1.1.3)] Length = 809 Score = 50.4 bits (119), Expect = 1e-06 Identities = 22/43 (51%), Positives = 30/43 (69%) Frame = -1 Query: 405 DNIIAFTTSRYKEQPLIVRGPGAGAEVTAGGVFCDILRLASYL 277 DN+ A + Y++ PL++RGPGAG +VTAG + DI RLA L Sbjct: 767 DNVFAIESRWYRDNPLVIRGPGAGRDVTAGAIQSDINRLAQLL 809
>DHOM_YEAST (P31116) Homoserine dehydrogenase (EC 1.1.1.3) (HDH)| Length = 359 Score = 48.1 bits (113), Expect = 5e-06 Identities = 22/45 (48%), Positives = 32/45 (71%) Frame = -1 Query: 411 GSDNIIAFTTSRYKEQPLIVRGPGAGAEVTAGGVFCDILRLASYL 277 GSDN+I+ T RY P++++G GAGA VTA GV D++++A L Sbjct: 316 GSDNVISIKTKRYTN-PVVIQGAGAGAAVTAAGVLGDVIKIAQRL 359
>AKH_BUCAI (P57290) Bifunctional aspartokinase/homoserine dehydrogenase| (AK-HD) [Includes: Aspartokinase (EC 2.7.2.4); Homoserine dehydrogenase (EC 1.1.1.3)] Length = 816 Score = 46.6 bits (109), Expect = 1e-05 Identities = 22/41 (53%), Positives = 29/41 (70%) Frame = -1 Query: 405 DNIIAFTTSRYKEQPLIVRGPGAGAEVTAGGVFCDILRLAS 283 +N +AF T+ Y+ PL++RG GAG VTA GVF D+LR S Sbjct: 776 ENALAFYTNYYQPIPLVLRGYGAGNNVTASGVFSDLLRTLS 816
>AK1H_ECOLI (P00561) Bifunctional aspartokinase/homoserine dehydrogenase I| (AKI-HDI) [Includes: Aspartokinase I (EC 2.7.2.4); Homoserine dehydrogenase I (EC 1.1.1.3)] Length = 820 Score = 46.6 bits (109), Expect = 1e-05 Identities = 21/42 (50%), Positives = 30/42 (71%) Frame = -1 Query: 405 DNIIAFTTSRYKEQPLIVRGPGAGAEVTAGGVFCDILRLASY 280 +N +AF + Y+ PL++RG GAG +VTA GVF D+LR S+ Sbjct: 775 ENALAFYSHYYQPLPLVLRGYGAGNDVTAAGVFADLLRTLSW 816
>AK1H_SERMA (P27725) Bifunctional aspartokinase/homoserine dehydrogenase I| (AKI-HDI) [Includes: Aspartokinase I (EC 2.7.2.4); Homoserine dehydrogenase I (EC 1.1.1.3)] Length = 819 Score = 46.6 bits (109), Expect = 1e-05 Identities = 21/42 (50%), Positives = 30/42 (71%) Frame = -1 Query: 405 DNIIAFTTSRYKEQPLIVRGPGAGAEVTAGGVFCDILRLASY 280 +N +AF + Y+ PL++RG GAG +VTA GVF D+LR S+ Sbjct: 774 ENALAFYSRYYQPLPLVLRGYGAGNDVTAAGVFADLLRTLSW 815
>AKH_BUCAP (Q8K9U9) Bifunctional aspartokinase/homoserine dehydrogenase| (AK-HD) [Includes: Aspartokinase (EC 2.7.2.4); Homoserine dehydrogenase (EC 1.1.1.3)] Length = 814 Score = 45.8 bits (107), Expect = 2e-05 Identities = 20/39 (51%), Positives = 29/39 (74%) Frame = -1 Query: 405 DNIIAFTTSRYKEQPLIVRGPGAGAEVTAGGVFCDILRL 289 +N + F T+ Y+ PL++RG GAG +VTA GVF D+LR+ Sbjct: 774 ENALTFYTNYYQPIPLVLRGYGAGNDVTASGVFSDLLRI 812
>AKH_HAEIN (P44505) Bifunctional aspartokinase/homoserine dehydrogenase| (AK-HD) [Includes: Aspartokinase (EC 2.7.2.4); Homoserine dehydrogenase (EC 1.1.1.3)] Length = 815 Score = 45.1 bits (105), Expect = 4e-05 Identities = 21/38 (55%), Positives = 27/38 (71%) Frame = -1 Query: 405 DNIIAFTTSRYKEQPLIVRGPGAGAEVTAGGVFCDILR 292 +N +AF T Y+ PL++RG GAG VTA G+F DILR Sbjct: 774 ENALAFYTRYYQPIPLLLRGYGAGNAVTAAGIFADILR 811
>AKH_BUCBP (Q89AR4) Bifunctional aspartokinase/homoserine dehydrogenase| (AK-HD) [Includes: Aspartokinase (EC 2.7.2.4); Homoserine dehydrogenase (EC 1.1.1.3)] Length = 816 Score = 44.7 bits (104), Expect = 5e-05 Identities = 19/39 (48%), Positives = 28/39 (71%) Frame = -1 Query: 405 DNIIAFTTSRYKEQPLIVRGPGAGAEVTAGGVFCDILRL 289 +N +AF + Y+ PL++RG GAG VTA G+F D+LR+ Sbjct: 776 ENALAFYSKYYQPIPLVLRGYGAGNNVTASGIFSDVLRI 814
>RPOA_EAVBU (P19811) Replicase polyprotein 1ab (ORF1ab polyprotein) [Includes:| Replicase polyprotein 1a (ORF1a)] [Contains: Nsp1 papain-like cysteine proteinase (EC 3.4.22.-) (PCP); Nsp2 cysteine proteinase (EC 3.4.22.-) (CP2) (CP); Nonstructural protein Length = 3175 Score = 32.7 bits (73), Expect = 0.21 Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 1/66 (1%) Frame = +2 Query: 215 LPAIYLRKSINTVTDIYEGAPR*DASRRMSQKTPPAVTSAPAPGPRT-ISGCSLYLEVVK 391 +PA +R S N+ D+ + AP + ++ P T AP P PRT + G S + Sbjct: 396 VPAPRVRPSANSSGDVKDPAPVPPVPKPRTKLATPNPTQAPIPAPRTRLQGASTQEPLAS 455 Query: 392 AMMLSD 409 A + SD Sbjct: 456 AGVASD 461
>MEGF8_HUMAN (Q7Z7M0) Multiple epidermal growth factor-like domains 8 (EGF-like| domain-containing protein 4) (Multiple EGF-like domain protein 4) Length = 2386 Score = 31.2 bits (69), Expect = 0.61 Identities = 22/58 (37%), Positives = 27/58 (46%) Frame = +2 Query: 209 YKLPAIYLRKSINTVTDIYEGAPR*DASRRMSQKTPPAVTSAPAPGPRTISGCSLYLE 382 Y A L S+ V Y G PR D M+ K PP V APAP + CS+Y + Sbjct: 55 YSHVAAVLGGSVLLVAGGYSGRPRGDL---MAYKVPPFVFQAPAPDYH-LDYCSMYTD 108
>GRIN1_MOUSE (Q3UNH4) G protein-regulated inducer of neurite outgrowth 1 (GRIN1)| Length = 932 Score = 30.0 bits (66), Expect = 1.4 Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 5/93 (5%) Frame = +2 Query: 92 SLHPLPRNSTLANKTKHLICFPRKYSEQKTTKSNIVQEGYKLPAIYLRKSINTVTDIYEG 271 S P PR + K + P K T S +G + ++ ++ + E Sbjct: 618 SASPSPRKAESQTSAKTVPQAP-----DKATSSLRQSDGTPYSSAQPQRDTRSIGSLPER 672 Query: 272 APR*DASRR-----MSQKTPPAVTSAPAPGPRT 355 P S++ +QK+P A +AP PGPRT Sbjct: 673 EPSASTSQKDLAAAAAQKSPSAEAAAPPPGPRT 705
>TBX4_MOUSE (P70325) T-box transcription factor TBX4 (T-box protein 4)| Length = 552 Score = 29.6 bits (65), Expect = 1.8 Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 4/52 (7%) Frame = +1 Query: 100 PPTKEQHTGKQNKTSYLLSSQVFRTKDYQVQYCARRVQVAGH----LPQKIY 243 P K + TG KT Y+L + D++ ++C + VAG +P ++Y Sbjct: 103 PSYKVKVTGMNPKTKYILLIDIVPADDHRYKFCDNKWMVAGKAEPAMPGRLY 154
>TBX4_HUMAN (P57082) T-box transcription factor TBX4 (T-box protein 4)| Length = 545 Score = 29.6 bits (65), Expect = 1.8 Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 4/52 (7%) Frame = +1 Query: 100 PPTKEQHTGKQNKTSYLLSSQVFRTKDYQVQYCARRVQVAGH----LPQKIY 243 P K + TG KT Y+L + D++ ++C + VAG +P ++Y Sbjct: 98 PSYKVKVTGMNPKTKYILLIDIVPADDHRYKFCDNKWMVAGKAEPAMPGRLY 149
>TBX4_CANFA (Q861Q9) T-box transcription factor TBX4 (T-box protein 4)| Length = 554 Score = 29.6 bits (65), Expect = 1.8 Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 4/52 (7%) Frame = +1 Query: 100 PPTKEQHTGKQNKTSYLLSSQVFRTKDYQVQYCARRVQVAGH----LPQKIY 243 P K + TG KT Y+L + D++ ++C + VAG +P ++Y Sbjct: 105 PSYKVKVTGMNPKTKYILLIDIVPADDHRYKFCDNKWMVAGKAEPAMPGRLY 156
>ARP6_YEAST (Q12509) Actin-like protein ARP6| Length = 438 Score = 29.6 bits (65), Expect = 1.8 Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 3/68 (4%) Frame = +2 Query: 8 RHSLFYYCTDNSVTVLPWVANKTKQNT*SLHPLPRNSTLANKTKHLICFPRKYSE---QK 178 +H+L Y D + L +V N K+N PLP ++ + T L P + + Sbjct: 269 KHALEYVLPDFQTSFLGYVRNPRKENV----PLPEDAQIITLTDELFTIPETFFHPEISQ 324 Query: 179 TTKSNIVQ 202 TK IV+ Sbjct: 325 ITKPGIVE 332
>GYRB_BORBU (P33769) DNA gyrase subunit B (EC 5.99.1.3)| Length = 639 Score = 29.3 bits (64), Expect = 2.3 Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 4/52 (7%) Frame = +1 Query: 100 PPTKEQHTGKQN----KTSYLLSSQVFRTKDYQVQYCARRVQVAGHLPQKIY 243 P +K + G+ + K ++L S++F T DY +R++ L KIY Sbjct: 152 PTSKVEVVGESSVTGTKVTFLADSEIFETLDYNFDVLEKRLKELAFLNDKIY 203
>ABDA_DROME (P29555) Homeobox protein abdominal-A| Length = 590 Score = 29.3 bits (64), Expect = 2.3 Identities = 29/97 (29%), Positives = 39/97 (40%) Frame = +1 Query: 97 TPPTKEQHTGKQNKTSYLLSSQVFRTKDYQVQYCARRVQVAGHLPQKIYQYSHRYL*GGA 276 +P QH G Q+ S + SS F+ QVQ Q HL + Q+ H+Y A Sbjct: 99 SPSHLSQHLG-QSPHSPVSSSSPFQQHHPQVQQQHLNHQQQQHLHHQQQQHHHQYSSLSA 157 Query: 277 EVGRQPQDVAEDASGSHLRARAWPAHDQWLLLVPRSG 387 + Q Q + A AH Q LL P +G Sbjct: 158 ALQLQQQQHHISKLAAAAVASHGHAHQQLLLTPPSAG 194
>IMMT_MOUSE (Q8CAQ8) Mitochondrial inner membrane protein (Mitofilin)| Length = 757 Score = 28.9 bits (63), Expect = 3.0 Identities = 15/45 (33%), Positives = 22/45 (48%) Frame = +1 Query: 130 QNKTSYLLSSQVFRTKDYQVQYCARRVQVAGHLPQKIYQYSHRYL 264 ++ T + S + R + Y VQ ARRV + +YQY YL Sbjct: 618 ESLTRGVYSEETLRARFYAVQKLARRVAMIDETRNSLYQYFLSYL 662
>IMMT_HUMAN (Q16891) Mitochondrial inner membrane protein (Mitofilin) (p87/89)| (Proliferation-inducing gene 4 protein) Length = 758 Score = 28.9 bits (63), Expect = 3.0 Identities = 15/45 (33%), Positives = 22/45 (48%) Frame = +1 Query: 130 QNKTSYLLSSQVFRTKDYQVQYCARRVQVAGHLPQKIYQYSHRYL 264 ++ T + S + R + Y VQ ARRV + +YQY YL Sbjct: 619 ESLTRGVYSEETLRARFYAVQKLARRVAMIDETRNSLYQYFLSYL 663
>BCA1_YEAST (P38891) Branched-chain-amino-acid aminotransferase, mitochondrial| precursor (EC 2.6.1.42) (BCAT) (TWT1 protein) (ECA39 protein) Length = 393 Score = 28.5 bits (62), Expect = 4.0 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 8/79 (10%) Frame = +2 Query: 65 ANKTKQNT*SLHPLPRNSTLANKTKHLICFPRKYSEQ--KTTKSNIVQEGYKLP-----A 223 A +T QNT ++ +N NK+ IC P SE+ K T I Q+ + +P + Sbjct: 98 AYRTPQNTITMFRPDKNMARMNKSAARICLPTFESEELIKLTGKLIEQDKHLVPQGNGYS 157 Query: 224 IYLRKS-INTVTDIYEGAP 277 +Y+R + I T + G P Sbjct: 158 LYIRPTMIGTSKGLGVGTP 176
>TEGU_HHV11 (P10220) Large tegument protein (Virion protein UL36)| Length = 3164 Score = 28.5 bits (62), Expect = 4.0 Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 7/53 (13%) Frame = -2 Query: 407 PTTSSPSPLRGTRSSH*SCAGQARARR*LPEAS-------SATSCGWRPTSAP 270 P ++P P +R+S S +G +RARR S SAT+ GWRP + P Sbjct: 2659 PDATAPRPPASSRASAASSSG-SRARRHRRARSLARATQASATTQGWRPPALP 2710
>TRFR_CHICK (O93603) Thyrotropin-releasing hormone receptor (TRH-R)| (Thyroliberin receptor) Length = 395 Score = 28.1 bits (61), Expect = 5.2 Identities = 16/27 (59%), Positives = 18/27 (66%), Gaps = 1/27 (3%) Frame = +1 Query: 112 EQHTG-KQNKTSYLLSSQVFRTKDYQV 189 E TG +QN T LLSSQ F T +YQV Sbjct: 2 ENGTGDEQNHTGLLLSSQEFVTAEYQV 28
>SEMG2_COLGU (Q5U7M8) Semenogelin-2 precursor (Semenogelin II) (SGII)| Length = 582 Score = 28.1 bits (61), Expect = 5.2 Identities = 14/46 (30%), Positives = 26/46 (56%) Frame = +1 Query: 76 KTKHLIPTPPTKEQHTGKQNKTSYLLSSQVFRTKDYQVQYCARRVQ 213 K+++ + P ++H K+NK SY SS T++ Q+ Y + +Q Sbjct: 445 KSQNQVTIPSQDQEHGHKENKISYQSSS----TEERQLNYGGKSIQ 486
>PALH_NEUCR (Q7RY98) pH-response regulator protein palH/rim-21| Length = 778 Score = 28.1 bits (61), Expect = 5.2 Identities = 16/48 (33%), Positives = 19/48 (39%) Frame = +1 Query: 268 GGAEVGRQPQDVAEDASGSHLRARAWPAHDQWLLLVPRSGEGDDVVGS 411 G A G P A SH+ A+A A +W L P D V S Sbjct: 545 GSASPGSAPAQDARSTQNSHVGAKASSAGSRWHALTPTVSSRDFVTRS 592
>HV3L_HUMAN (P01773) Ig heavy chain V-III region BUR| Length = 119 Score = 28.1 bits (61), Expect = 5.2 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = +1 Query: 133 NKTSYLLSSQVFRTKDYQVQYCARRVQVAG 222 +K + L + RT+D V YCA+ + VAG Sbjct: 75 SKBTLYLZMKTLRTEDTAVYYCAKLIAVAG 104
>TEGU_EBV (P03186) Large tegument protein| Length = 3149 Score = 28.1 bits (61), Expect = 5.2 Identities = 13/46 (28%), Positives = 24/46 (52%) Frame = +2 Query: 8 RHSLFYYCTDNSVTVLPWVANKTKQNT*SLHPLPRNSTLANKTKHL 145 R L+ + ++ +PW + +++ S+ PLP T+A K K L Sbjct: 1066 RELLYLGTALSDMSGIPWPLERVEEDDPSIAPLPEFETVAKKQKEL 1111
>DCAK2_MOUSE (Q6PGN3) Serine/threonine-protein kinase DCAMKL2 (EC 2.7.11.1)| (Doublecortin-like and CAM kinase-like 2) Length = 756 Score = 27.7 bits (60), Expect = 6.8 Identities = 11/24 (45%), Positives = 14/24 (58%) Frame = +2 Query: 302 SQKTPPAVTSAPAPGPRTISGCSL 373 +Q+ PP + S PGP SGC L Sbjct: 724 AQEAPPPLESPRPPGPPATSGCDL 747
>GCP6_HUMAN (Q96RT7) Gamma-tubulin complex component 6 (GCP-6)| Length = 1819 Score = 27.7 bits (60), Expect = 6.8 Identities = 11/19 (57%), Positives = 14/19 (73%) Frame = +2 Query: 317 PAVTSAPAPGPRTISGCSL 373 PAV ++PAPGP + CSL Sbjct: 959 PAVATSPAPGPLQAAECSL 977
>ATS15_HUMAN (Q8TE58) ADAMTS-15 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase with thrombospondin motifs 15) (ADAM-TS 15) (ADAM-TS15) Length = 950 Score = 27.7 bits (60), Expect = 6.8 Identities = 22/68 (32%), Positives = 28/68 (41%) Frame = +3 Query: 30 ALIIR*QFCHGWQTKQNKTPDPYTPYQGTAHWQTKQNILFAFLASIQNKRLPSPILCKKG 209 AL +R FC WQ K NK D + Y TA T+Q++ A + G Sbjct: 286 ALTLR-NFC-AWQKKLNKVSDKHPEYWDTAILFTRQDLCGATTCDTLG-------MADVG 336 Query: 210 TSCRPSTS 233 T C P S Sbjct: 337 TMCDPKRS 344
>GUN4_TRIRE (O14405) Endoglucanase-4 precursor (EC 3.2.1.4) (Endoglucanase IV)| (Endo-1,4-beta-glucanase IV) (Cellulase IV) (EGIV) Length = 344 Score = 27.7 bits (60), Expect = 6.8 Identities = 15/21 (71%), Positives = 15/21 (71%) Frame = +2 Query: 287 ASRRMSQKTPPAVTSAPAPGP 349 AS R S TPPA TSAPA GP Sbjct: 288 ASSRPSS-TPPATTSAPAGGP 307
>RCOR2_XENLA (Q6NRZ0) REST corepressor 2| Length = 503 Score = 27.7 bits (60), Expect = 6.8 Identities = 24/95 (25%), Positives = 37/95 (38%), Gaps = 11/95 (11%) Frame = +2 Query: 101 PLPRNSTLANKTKHLICFPRKYSE--QKTTKSNIVQEG---------YKLPAIYLRKSIN 247 P P ++ ++NKT P + + Q T+ S+ Q LP LR +I Sbjct: 394 PPPASTDMSNKTSGSSQTPNEEDDEVQITSVSSSSQPAPPAAAAAASLSLPPPLLRPAIP 453 Query: 248 TVTDIYEGAPR*DASRRMSQKTPPAVTSAPAPGPR 352 ++ P R + + PP V AP PR Sbjct: 454 CAPTLHRQPPPLQPGRLLQPRPPPLVRPAPRQSPR 488
>TBX3_CHICK (O73718) T-box transcription factor TBX3 (T-box protein 3)| (Fragment) Length = 414 Score = 27.7 bits (60), Expect = 6.8 Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 4/52 (7%) Frame = +1 Query: 100 PPTKEQHTGKQNKTSYLLSSQVFRTKDYQVQYCARRVQVAG----HLPQKIY 243 PP K + TG K Y+L + D + ++ R VAG +P+++Y Sbjct: 136 PPFKVRCTGLDKKAKYILLMDIVAADDCRYKFHNSRWMVAGKADPEMPKRMY 187
>TENX_HUMAN (P22105) Tenascin-X precursor (TN-X) (Hexabrachion-like protein)| Length = 4289 Score = 27.3 bits (59), Expect = 8.8 Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 7/59 (11%) Frame = +1 Query: 61 GGKQNKTKHLIPTPPTKEQHTGK---QNKTSYLLSSQVFRTK----DYQVQYCARRVQV 216 G ++ +T+ PTPP E H G+ + TS+ L T+ +++QY R Q+ Sbjct: 1946 GREETETETTAPTPPAPEPHLGELTVEEATSHTLHLSWMVTEGEFDSFEIQYTDRDGQL 2004
>EME1_ASHGO (Q75B88) Crossover junction endonuclease EME1 (EC 3.1.22.-)| Length = 714 Score = 27.3 bits (59), Expect = 8.8 Identities = 15/60 (25%), Positives = 31/60 (51%), Gaps = 5/60 (8%) Frame = +1 Query: 49 SSAMGGKQNKTKHLIPTPPTKEQHTGKQNKTSYLLSSQVFRTKDYQVQ-----YCARRVQ 213 SS +GG+ + + + TP + + G +N+T+ ++++ FR + Q C R+Q Sbjct: 223 SSELGGESSPSLQALTTPLPAKSNDGDKNQTTNVMTTGGFRLGTMEKQTLNGSACVDRIQ 282
>DFRA_GERHY (P51105) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR)| (Dihydrokaempferol 4-reductase) Length = 366 Score = 27.3 bits (59), Expect = 8.8 Identities = 13/50 (26%), Positives = 24/50 (48%) Frame = +2 Query: 59 WVANKTKQNT*SLHPLPRNSTLANKTKHLICFPRKYSEQKTTKSNIVQEG 208 W+ + + +H R+ K KHL+ P+ + K K+++ QEG Sbjct: 21 WLVMRLLERGYVVHATVRDPGDLKKVKHLLELPKAQTNLKLWKADLTQEG 70
>XYLT_DROPS (Q5QQ53) Xylosyltransferase oxt (EC 2.4.2.26) (Peptide| O-xylosyltransferase) Length = 880 Score = 27.3 bits (59), Expect = 8.8 Identities = 20/47 (42%), Positives = 22/47 (46%), Gaps = 6/47 (12%) Frame = -2 Query: 131 CLPVCCSL---VGGV--GIRCFVLFCLPPMAELLPNYQCNNK-KGNA 9 CL +C GV G CF F PP A LP+ CN K GNA Sbjct: 170 CLELCLQSGYPYAGVQYGRECFCGFDTPPKAAKLPDSSCNIKCLGNA 216
>PYRB_PYRFU (Q8U373) Aspartate carbamoyltransferase (EC 2.1.3.2) (Aspartate| transcarbamylase) (ATCase) Length = 308 Score = 27.3 bits (59), Expect = 8.8 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 3/39 (7%) Frame = +2 Query: 62 VANKTKQNT*SLHPLPRNSTL---ANKTKHLICFPRKYS 169 V +K K+ +HPLPR + +KTKH I F + ++ Sbjct: 254 VLSKAKETLKVMHPLPRVDEIHPEVDKTKHAIYFKQVFN 292
>CREB2_BOVIN (P27925) cAMP response element-binding protein 2 (CREB2) (Cyclic| AMP-responsive DNA-binding protein) Length = 325 Score = 27.3 bits (59), Expect = 8.8 Identities = 12/53 (22%), Positives = 25/53 (47%) Frame = +2 Query: 233 RKSINTVTDIYEGAPR*DASRRMSQKTPPAVTSAPAPGPRTISGCSLYLEVVK 391 RK +N ++ G PR + + + + PA+T+ P P + Y+ + + Sbjct: 119 RKILNDLSSDAPGVPRIEEEKSEEETSAPAITTVTVPTPIYQTSSGQYIAITQ 171
>NU6M_PIG (O79882) NADH-ubiquinone oxidoreductase chain 6 (EC 1.6.5.3) (NADH| dehydrogenase subunit 6) Length = 175 Score = 27.3 bits (59), Expect = 8.8 Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 1/80 (1%) Frame = -1 Query: 360 LIVRGPGAGAEVTAGGVFCDILRLASYLGAPS*ISVTVLIDFLR*MAGNLYPSCTILDLV 181 ++ G G G + GG F ++ YLG + V+ + MA +YP + + Sbjct: 34 IVSGGVGCGIVLNFGGSFLGLMVFLIYLG-----GMLVVFGYTTAMATEMYPEVWVSNKT 88 Query: 180 VFCSEYLRGKQIR-CFVLFA 124 VF ++ G + C V +A Sbjct: 89 VF-GAFVSGLMMEFCMVYYA 107
>KRA52_HUMAN (Q701N4) Keratin-associated protein 5-2 (Keratin-associated protein| 5.2) (Ultrahigh sulfur keratin-associated protein 5.2) (Keratin-associated protein 5-8) (Keratin-associated protein 5.8) Length = 177 Score = 27.3 bits (59), Expect = 8.8 Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 1/33 (3%) Frame = -2 Query: 119 CCSLVGGVGIRCFV-LFCLPPMAELLPNYQCNN 24 C S GG G RC+V + C P+ +P C + Sbjct: 45 CSSSCGGCGSRCYVPVCCCKPVCSWVPACSCTS 77
>DSCL1_HUMAN (Q8TD84) Down syndrome cell adhesion molecule-like protein 1| precursor (Down syndrome cell adhesion molecule 2) Length = 2053 Score = 27.3 bits (59), Expect = 8.8 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 5/34 (14%) Frame = +2 Query: 263 YEGAPR*DASRRMSQKT-----PPAVTSAPAPGP 349 + GAP ++ + Q+T PPA T+ PAPGP Sbjct: 1957 HPGAPAAASTATLPQRTLAMPAPPAGTAPPAPGP 1990
>OPT6_ARATH (Q9T095) Oligopeptide transporter 6 (AtOPT6)| Length = 736 Score = 27.3 bits (59), Expect = 8.8 Identities = 25/101 (24%), Positives = 45/101 (44%), Gaps = 5/101 (4%) Frame = -1 Query: 360 LIVRGPGAGAE-VTAGGVFCDILRLASYLGAPS*----ISVTVLIDFLR*MAGNLYPSCT 196 ++V G+G + G + D + +++YLG+P SV V I F+ Sbjct: 246 ILVNQLGSGEHGLGIGSIGFDWVTISAYLGSPLASPLFASVNVAIGFV-----------L 294 Query: 195 ILDLVVFCSEYLRGKQIRCFVLFASVLFLGRGCRDQVFCFV 73 ++ +V +L + F +F+S LF+G G R V + Sbjct: 295 VMYIVTPVCYWLNIYDAKTFPIFSSQLFMGNGSRYDVLSII 335
>MCM3A_MOUSE (Q9WUU9) 80 kda MCM3-associated protein (GANP protein)| Length = 1971 Score = 27.3 bits (59), Expect = 8.8 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = -3 Query: 292 AGVLPRRPLIDICDCIDRFSEVDGRQLVPFLH 197 A V+ L DI + F+EV G QL+P LH Sbjct: 1612 ASVVSSEQLCDISWPVMEFAEVGGSQLLPHLH 1643
>L_VSVJO (P16379) Large structural protein (L protein) (Transcriptase)| (Replicase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)] Length = 2109 Score = 27.3 bits (59), Expect = 8.8 Identities = 13/36 (36%), Positives = 20/36 (55%) Frame = +2 Query: 110 RNSTLANKTKHLICFPRKYSEQKTTKSNIVQEGYKL 217 RN TL N TKH +C ++ QK + Q+G+ + Sbjct: 659 RNGTLCNSTKHRVC----WNGQKGGLEGLRQKGWSI 690
>L_VSVJH (P13615) Large structural protein (L protein) (Transcriptase)| (Replicase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)] Length = 2109 Score = 27.3 bits (59), Expect = 8.8 Identities = 13/36 (36%), Positives = 20/36 (55%) Frame = +2 Query: 110 RNSTLANKTKHLICFPRKYSEQKTTKSNIVQEGYKL 217 RN TL N TKH +C ++ QK + Q+G+ + Sbjct: 659 RNGTLCNSTKHRVC----WNGQKGGLEGLRQKGWSI 690
>GBF_DICDI (P36417) G-box-binding factor (GBF)| Length = 708 Score = 27.3 bits (59), Expect = 8.8 Identities = 29/107 (27%), Positives = 38/107 (35%), Gaps = 10/107 (9%) Frame = +1 Query: 70 QNKTKHLIPTPPTKEQHTGKQNKTSYLL------SSQVFRTKDYQVQYCARRVQV----A 219 QN+ I PPT G N S+LL SS VF + D Q V Sbjct: 47 QNQMNPPILFPPTSSLLGGSSNTPSFLLPPSSIMSSNVFPSHDGQYPDMPNMVDQYQIHP 106 Query: 220 GHLPQKIYQYSHRYL*GGAEVGRQPQDVAEDASGSHLRARAWPAHDQ 360 P YQY ++ A+ + PQ H + + P H Q Sbjct: 107 NQNPHYNYQYQLMFMQQQAQQNQPPQQ--NQQQQHHQQQQQQPQHHQ 151
>CREB1_RAT (P15337) cAMP response element-binding protein (CREB)| Length = 341 Score = 27.3 bits (59), Expect = 8.8 Identities = 12/53 (22%), Positives = 25/53 (47%) Frame = +2 Query: 233 RKSINTVTDIYEGAPR*DASRRMSQKTPPAVTSAPAPGPRTISGCSLYLEVVK 391 RK +N ++ G PR + + + + PA+T+ P P + Y+ + + Sbjct: 135 RKILNDLSSDAPGVPRIEEEKSEEETSAPAITTVTVPTPIYQTSSGQYIAITQ 187
>CREB1_MOUSE (Q01147) cAMP response element-binding protein (CREB)| Length = 341 Score = 27.3 bits (59), Expect = 8.8 Identities = 12/53 (22%), Positives = 25/53 (47%) Frame = +2 Query: 233 RKSINTVTDIYEGAPR*DASRRMSQKTPPAVTSAPAPGPRTISGCSLYLEVVK 391 RK +N ++ G PR + + + + PA+T+ P P + Y+ + + Sbjct: 135 RKILNDLSSDAPGVPRIEEEKSEEETSAPAITTVTVPTPIYQTSSGQYIAITQ 187
>CREB1_HUMAN (P16220) cAMP response element-binding protein (CREB)| Length = 341 Score = 27.3 bits (59), Expect = 8.8 Identities = 12/53 (22%), Positives = 25/53 (47%) Frame = +2 Query: 233 RKSINTVTDIYEGAPR*DASRRMSQKTPPAVTSAPAPGPRTISGCSLYLEVVK 391 RK +N ++ G PR + + + + PA+T+ P P + Y+ + + Sbjct: 135 RKILNDLSSDAPGVPRIEEEKSEEETSAPAITTVTVPTPIYQTSSGQYIAITQ 187 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 64,234,216 Number of Sequences: 219361 Number of extensions: 1348667 Number of successful extensions: 4649 Number of sequences better than 10.0: 53 Number of HSP's better than 10.0 without gapping: 4428 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4647 length of database: 80,573,946 effective HSP length: 112 effective length of database: 56,005,514 effective search space used: 1344132336 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
