ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl26d08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY484588.1| Musa acuminata clone MuG9, genomic sequence 56 8e-05
2ref|XM_550374.1| Oryza sativa (japonica cultivar-group), mRNA 52 0.001
3dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.001
4dbj|AP002864.2| Oryza sativa (japonica cultivar-group) genomic D... 52 0.001
5dbj|AB023482.2| Oryza sativa (japonica cultivar-group) genomic D... 52 0.001
6dbj|AK068858.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.001
7gb|AY105931.1| Zea mays PCO081802 mRNA sequence 50 0.005
8gb|CP000108.1| Chlorobium chlorochromatii CaD3, complete genome 44 0.32
9ref|NM_191289.1| Oryza sativa (japonica cultivar-group), predic... 44 0.32
10dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.32
11gb|AC154558.2| Mus musculus BAC clone RP23-240G18 from chromosom... 44 0.32
12gb|AC019090.9| Homo sapiens BAC clone RP11-375P12 from 2, comple... 44 0.32
13dbj|AP003375.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.32
14dbj|AK100739.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.32
15emb|CR391908.15| Zebrafish DNA sequence from clone DKEY-225E11 i... 44 0.32
16gb|AC174082.3| Mus musculus BAC clone RP23-395H10 from chromosom... 44 0.32
17gb|AC113302.13| Mus musculus chromosome 5, clone RP23-431M7, com... 42 1.3
18gb|AC122799.4| Mus musculus BAC clone RP23-308K11 from 16, compl... 42 1.3
19gb|AC124189.3| Mus musculus BAC clone RP23-254C8 from 5, complet... 42 1.3
20gb|AC154383.2| Mus musculus BAC clone RP23-38N16 from chromosome... 42 1.3
21dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 42 1.3
22gb|AC116691.12| Mus musculus chromosome 1, clone RP24-312I13, co... 42 1.3
23gb|AC101854.8| Mus musculus chromosome 1, clone RP23-298H18, com... 40 5.0
24gb|AC124128.11| Mus musculus chromosome 6, clone RP23-158O11, co... 40 5.0
25gb|AC004020.1|HUAC004020 Homo sapiens Chromosome 16 BAC clone CI... 40 5.0
26gb|AC122798.3| Mus musculus BAC clone RP23-301A3 from 2, complet... 40 5.0
27gb|AC144477.16| Medicago truncatula clone mth2-6k4, complete seq... 40 5.0
28gb|AC151744.23| Medicago truncatula clone mth2-32k10, complete s... 40 5.0
29emb|AL445245.12| Human DNA sequence from clone RP4-690O18 on chr... 40 5.0
30emb|AL672192.6| Zebrafish DNA sequence from clone BUSM1-87I4 Con... 40 5.0
31emb|BX323026.5| Mouse DNA sequence from clone RP24-95F14 on chro... 40 5.0
32gb|AC018861.9| Homo sapiens chromosome 8, clone RP11-577N1, comp... 40 5.0
33gb|AC131384.1| Homo sapiens chromosome 16 clone RP11-465L11, com... 40 5.0
34gb|AC090577.4| Homo sapiens chromosome 8, clone RP11-575N24, com... 40 5.0
35gb|AC104462.1| Homo sapiens chromosome 1 clone RP11-522M21, comp... 40 5.0
36emb|AL592562.18| Zebrafish DNA sequence from clone XX-85C7 in li... 40 5.0
37emb|BX649377.8| Zebrafish DNA sequence from clone CH211-196J1 in... 40 5.0
38gb|AC080007.26| Homo sapiens 3 BAC RP11-529F4 (Roswell Park Canc... 40 5.0
39gb|AC156550.5| Mus musculus chromosome 15, clone RP23-353K7, com... 40 5.0
40gb|AC007760.6|AC007760 Drosophila melanogaster, chromosome 3R, r... 40 5.0
41gb|AC007647.6|AC007647 Drosophila melanogaster, chromosome 3R, r... 40 5.0
42gb|AC091489.4| Homo sapiens chromosome 16 clone RP11-164A6, comp... 40 5.0
43emb|BX255877.14| Zebrafish DNA sequence from clone CH211-254C9, ... 40 5.0
44gb|AC115078.11| Mus musculus chromosome 3, clone RP24-457B22, co... 40 5.0
45gb|AE003712.1| Drosophila melanogaster chromosome 3R, section 50... 40 5.0
46emb|BX005256.11| Zebrafish DNA sequence from clone DKEY-79D12, c... 40 5.0
47emb|AL449212.1|HS436B3 Homo sapiens chromosome 3 sequence from P... 40 5.0
48emb|AL928607.8| Mouse DNA sequence from clone RP23-326J18 on chr... 40 5.0 
>gb|AY484588.1| Musa acuminata clone MuG9, genomic sequence
          Length = 73268

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                        
Query: 310  taacttccgcatgccaggcactcttccgggttgttcaaggagcagacaacttgcgccatt 369
            |||||||| ||||||| |||||||||  |||| | |||||| || ||||| || ||||||
Sbjct: 9500 taacttccacatgccatgcactcttcacggttttccaaggaacaaacaacctgtgccatt 9559

                    
Query: 370  ttggcttc 377
            ||||||||
Sbjct: 9560 ttggcttc 9567
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>ref|XM_550374.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3103

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                        
Query: 308  tctaacttccgcatgccaggcactcttccgggttgttcaaggagcagacaacttgcgcca 367
            |||||||||| || |||| |||||| ||| ||||||||||||| || || | ||| ||||
Sbjct: 2705 tctaacttccacacgccaagcactcctcccggttgttcaaggaacaaaccatttgagcca 2646

                      
Query: 368  ttttggcttc 377
            |||| |||||
Sbjct: 2645 ttttagcttc 2636
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 59/70 (84%)
 Strand = Plus / Plus

                                                                           
Query: 308     tctaacttccgcatgccaggcactcttccgggttgttcaaggagcagacaacttgcgcca 367
               |||||||||| || |||| |||||| ||| ||||||||||||| || || | ||| ||||
Sbjct: 3449091 tctaacttccacacgccaagcactcctcccggttgttcaaggaacaaaccatttgagcca 3449150

                         
Query: 368     ttttggcttc 377
               |||| |||||
Sbjct: 3449151 ttttagcttc 3449160
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>dbj|AP002864.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0033B09
          Length = 143545

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 59/70 (84%)
 Strand = Plus / Plus

                                                                         
Query: 308   tctaacttccgcatgccaggcactcttccgggttgttcaaggagcagacaacttgcgcca 367
             |||||||||| || |||| |||||| ||| ||||||||||||| || || | ||| ||||
Sbjct: 65795 tctaacttccacacgccaagcactcctcccggttgttcaaggaacaaaccatttgagcca 65854

                       
Query: 368   ttttggcttc 377
             |||| |||||
Sbjct: 65855 ttttagcttc 65864
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>dbj|AB023482.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone
              P0680A03
          Length = 156054

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 59/70 (84%)
 Strand = Plus / Plus

                                                                          
Query: 308    tctaacttccgcatgccaggcactcttccgggttgttcaaggagcagacaacttgcgcca 367
              |||||||||| || |||| |||||| ||| ||||||||||||| || || | ||| ||||
Sbjct: 140645 tctaacttccacacgccaagcactcctcccggttgttcaaggaacaaaccatttgagcca 140704

                        
Query: 368    ttttggcttc 377
              |||| |||||
Sbjct: 140705 ttttagcttc 140714
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>dbj|AK068858.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013169B12, full
            insert sequence
          Length = 3104

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                        
Query: 308  tctaacttccgcatgccaggcactcttccgggttgttcaaggagcagacaacttgcgcca 367
            |||||||||| || |||| |||||| ||| ||||||||||||| || || | ||| ||||
Sbjct: 2705 tctaacttccacacgccaagcactcctcccggttgttcaaggaacaaaccatttgagcca 2646

                      
Query: 368  ttttggcttc 377
            |||| |||||
Sbjct: 2645 ttttagcttc 2636
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>gb|AY105931.1| Zea mays PCO081802 mRNA sequence
          Length = 1120

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                            
Query: 308 tctaacttccgcatgccaggcactcttccgggttgttcaaggagcagac 356
           |||| ||||| || ||||||||||||||| |||||||||| || |||||
Sbjct: 755 tctagcttccacacgccaggcactcttcccggttgttcaaagaacagac 707
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>gb|CP000108.1| Chlorobium chlorochromatii CaD3, complete genome
          Length = 2572079

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 134    ccaacattggcaactcagccat 155
              ||||||||||||||||||||||
Sbjct: 442330 ccaacattggcaactcagccat 442309
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>ref|NM_191289.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1458

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 331  tcttccgggttgttcaaggagc 352
            ||||||||||||||||||||||
Sbjct: 1097 tcttccgggttgttcaaggagc 1118
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 331      tcttccgggttgttcaaggagc 352
                ||||||||||||||||||||||
Sbjct: 31756201 tcttccgggttgttcaaggagc 31756222
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>gb|AC154558.2| Mus musculus BAC clone RP23-240G18 from chromosome 13, complete
             sequence
          Length = 186758

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 11    aaaaatacttgcacattaatgc 32
             ||||||||||||||||||||||
Sbjct: 46528 aaaaatacttgcacattaatgc 46507
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>gb|AC019090.9| Homo sapiens BAC clone RP11-375P12 from 2, complete sequence
          Length = 87224

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 271   tgccttggttaaaagaaaaata 292
             ||||||||||||||||||||||
Sbjct: 13709 tgccttggttaaaagaaaaata 13730
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>dbj|AP003375.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1414_E05
          Length = 105222

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 331   tcttccgggttgttcaaggagc 352
             ||||||||||||||||||||||
Sbjct: 34239 tcttccgggttgttcaaggagc 34260
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>dbj|AK100739.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023118D04, full
            insert sequence
          Length = 1868

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 331  tcttccgggttgttcaaggagc 352
            ||||||||||||||||||||||
Sbjct: 1196 tcttccgggttgttcaaggagc 1217
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>emb|CR391908.15| Zebrafish DNA sequence from clone DKEY-225E11 in linkage group 19,
             complete sequence
          Length = 171679

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 277   ggttaaaagaaaaatagatgca 298
             ||||||||||||||||||||||
Sbjct: 78780 ggttaaaagaaaaatagatgca 78759
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>gb|AC174082.3| Mus musculus BAC clone RP23-395H10 from chromosome 13, complete sequence
          Length = 208596

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 11     aaaaatacttgcacattaatgc 32
              ||||||||||||||||||||||
Sbjct: 151215 aaaaatacttgcacattaatgc 151194
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>gb|AC113302.13| Mus musculus chromosome 5, clone RP23-431M7, complete sequence
          Length = 201427

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 41    aacagcaacaacaagacaaatcaat 65
             ||||||||||| |||||||||||||
Sbjct: 23322 aacagcaacaagaagacaaatcaat 23346
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>gb|AC122799.4| Mus musculus BAC clone RP23-308K11 from 16, complete sequence
          Length = 203686

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 278   gttaaaagaaaaatagatgcaacag 302
             ||||||| |||||||||||||||||
Sbjct: 52575 gttaaaataaaaatagatgcaacag 52599
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>gb|AC124189.3| Mus musculus BAC clone RP23-254C8 from 5, complete sequence
          Length = 150507

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 41    aacagcaacaacaagacaaatcaat 65
             ||||||||||| |||||||||||||
Sbjct: 42762 aacagcaacaagaagacaaatcaat 42738
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>gb|AC154383.2| Mus musculus BAC clone RP23-38N16 from chromosome 16, complete sequence
          Length = 205926

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 276   tggttaaaagaaaaatagatgcaac 300
             ||||||||||||||||||| |||||
Sbjct: 73125 tggttaaaagaaaaatagaagcaac 73101
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 315     tccgcatgccaggcactcttccggg 339
               ||||||||||||||||||| |||||
Sbjct: 5379630 tccgcatgccaggcactctaccggg 5379654
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>gb|AC116691.12| Mus musculus chromosome 1, clone RP24-312I13, complete sequence
          Length = 154587

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 76    atgatacatatatatacagct 96
             |||||||||||||||||||||
Sbjct: 27638 atgatacatatatatacagct 27618
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>gb|AC101854.8| Mus musculus chromosome 1, clone RP23-298H18, complete sequence
          Length = 190474

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 58    aaatcaataacacaaacaat 77
             ||||||||||||||||||||
Sbjct: 87360 aaatcaataacacaaacaat 87379
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>gb|AC124128.11| Mus musculus chromosome 6, clone RP23-158O11, complete sequence
          Length = 208907

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 276    tggttaaaagaaaaatagat 295
              ||||||||||||||||||||
Sbjct: 142721 tggttaaaagaaaaatagat 142740
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>gb|AC004020.1|HUAC004020 Homo sapiens Chromosome 16 BAC clone CIT987SK-A-319E8, complete
             sequence
          Length = 153773

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 273   ccttggttaaaagaaaaata 292
             ||||||||||||||||||||
Sbjct: 91974 ccttggttaaaagaaaaata 91993
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>gb|AC122798.3| Mus musculus BAC clone RP23-301A3 from 2, complete sequence
          Length = 206324

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 53    aagacaaatcaataacacaaacaa 76
             |||||||| |||||||||||||||
Sbjct: 65763 aagacaaaacaataacacaaacaa 65740
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>gb|AC144477.16| Medicago truncatula clone mth2-6k4, complete sequence
          Length = 112241

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 275   ttggttaaaagaaaaataga 294
             ||||||||||||||||||||
Sbjct: 99013 ttggttaaaagaaaaataga 99032
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>gb|AC151744.23| Medicago truncatula clone mth2-32k10, complete sequence
          Length = 110897

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 275   ttggttaaaagaaaaataga 294
             ||||||||||||||||||||
Sbjct: 97085 ttggttaaaagaaaaataga 97066
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>emb|AL445245.12| Human DNA sequence from clone RP4-690O18 on chromosome 1, complete
             sequence
          Length = 51112

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 81    acatatatatacagctgcag 100
             ||||||||||||||||||||
Sbjct: 41627 acatatatatacagctgcag 41608
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>emb|AL672192.6| Zebrafish DNA sequence from clone BUSM1-87I4 Contains part of a gene
             for a novel glutaminase, part of a gene similar to STAT1
             (signal transducer and activator of transcription) and two
             CpG islands, complete sequence
          Length = 90875

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 77    tgatacatatatatacagct 96
             ||||||||||||||||||||
Sbjct: 43277 tgatacatatatatacagct 43296
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>emb|BX323026.5| Mouse DNA sequence from clone RP24-95F14 on chromosome 11 Contains the
             Ppm1d gene for magnesium-dependent protein phosphatase 1D
             delta isoform, the 5' end of the Bcas3 gene for breast
             carcinoma amplified sequence 3 and a CpG island, complete
             sequence
          Length = 130030

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 248   caaaccgttgggttgtgtaa 267
             ||||||||||||||||||||
Sbjct: 86066 caaaccgttgggttgtgtaa 86047
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>gb|AC018861.9| Homo sapiens chromosome 8, clone RP11-577N1, complete sequence
          Length = 187047

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 274    cttggttaaaagaaaaatag 293
              ||||||||||||||||||||
Sbjct: 150519 cttggttaaaagaaaaatag 150538
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>gb|AC131384.1| Homo sapiens chromosome 16 clone RP11-465L11, complete sequence
          Length = 92474

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 273   ccttggttaaaagaaaaata 292
             ||||||||||||||||||||
Sbjct: 27344 ccttggttaaaagaaaaata 27325
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>gb|AC090577.4| Homo sapiens chromosome 8, clone RP11-575N24, complete sequence
          Length = 162391

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 274    cttggttaaaagaaaaatag 293
              ||||||||||||||||||||
Sbjct: 145141 cttggttaaaagaaaaatag 145122
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>gb|AC104462.1| Homo sapiens chromosome 1 clone RP11-522M21, complete sequence
          Length = 183271

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 74     caatgatacatatatataca 93
              ||||||||||||||||||||
Sbjct: 118365 caatgatacatatatataca 118384
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>emb|AL592562.18| Zebrafish DNA sequence from clone XX-85C7 in linkage group 19, complete
             sequence
          Length = 94129

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 77    tgatacatatatatacagct 96
             ||||||||||||||||||||
Sbjct: 50658 tgatacatatatatacagct 50677
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>emb|BX649377.8| Zebrafish DNA sequence from clone CH211-196J1 in linkage group 19,
             complete sequence
          Length = 217898

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 77    tgatacatatatatacagct 96
             ||||||||||||||||||||
Sbjct: 80612 tgatacatatatatacagct 80631
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>gb|AC080007.26| Homo sapiens 3 BAC RP11-529F4 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 168551

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 321    tgccaggcactcttccgggt 340
              ||||||||||||||||||||
Sbjct: 156053 tgccaggcactcttccgggt 156072
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>gb|AC156550.5| Mus musculus chromosome 15, clone RP23-353K7, complete sequence
          Length = 205302

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 35     aagtataacagcaacaacaa 54
              ||||||||||||||||||||
Sbjct: 173218 aagtataacagcaacaacaa 173237
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>gb|AC007760.6|AC007760 Drosophila melanogaster, chromosome 3R, region 89B-89B, BAC clone
              BACR37I18, complete sequence
          Length = 195037

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 25     attaatgcataagtataacagcaa 48
              ||||||| ||||||||||||||||
Sbjct: 189283 attaatgtataagtataacagcaa 189306
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>gb|AC007647.6|AC007647 Drosophila melanogaster, chromosome 3R, region 89B-89C, BAC clone
             BACR05P04, complete sequence
          Length = 194335

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 25    attaatgcataagtataacagcaa 48
             ||||||| ||||||||||||||||
Sbjct: 99246 attaatgtataagtataacagcaa 99269
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>gb|AC091489.4| Homo sapiens chromosome 16 clone RP11-164A6, complete sequence
          Length = 150214

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 273   ccttggttaaaagaaaaata 292
             ||||||||||||||||||||
Sbjct: 28818 ccttggttaaaagaaaaata 28837
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>emb|BX255877.14| Zebrafish DNA sequence from clone CH211-254C9, complete sequence
          Length = 152976

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 72   aacaatgatacatatatata 91
            ||||||||||||||||||||
Sbjct: 4490 aacaatgatacatatatata 4509
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>gb|AC115078.11| Mus musculus chromosome 3, clone RP24-457B22, complete sequence
          Length = 179789

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 41     aacagcaacaacaagacaaa 60
              ||||||||||||||||||||
Sbjct: 117646 aacagcaacaacaagacaaa 117627
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>gb|AE003712.1| Drosophila melanogaster chromosome 3R, section 50 of 118 of the complete
              sequence
          Length = 226200

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 25     attaatgcataagtataacagcaa 48
              ||||||| ||||||||||||||||
Sbjct: 188695 attaatgtataagtataacagcaa 188718
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>emb|BX005256.11| Zebrafish DNA sequence from clone DKEY-79D12, complete sequence
          Length = 199468

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 279    ttaaaagaaaaatagatgca 298
              ||||||||||||||||||||
Sbjct: 185486 ttaaaagaaaaatagatgca 185467
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>emb|AL449212.1|HS436B3 Homo sapiens chromosome 3 sequence from PAC RP3-436B3 map 3q21 region
             D3S3607-D3S1587, complete sequence
          Length = 67335

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 321   tgccaggcactcttccgggt 340
             ||||||||||||||||||||
Sbjct: 30770 tgccaggcactcttccgggt 30751
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>emb|AL928607.8| Mouse DNA sequence from clone RP23-326J18 on chromosome 2, complete
             sequence
          Length = 128293

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 53    aagacaaatcaataacacaaacaa 76
             |||||||| |||||||||||||||
Sbjct: 14235 aagacaaaacaataacacaaacaa 14258


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,152,660
Number of Sequences: 3902068
Number of extensions: 5152660
Number of successful extensions: 135644
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 135422
Number of HSP's gapped (non-prelim): 222
length of query: 378
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 356
effective length of database: 17,147,199,772
effective search space: 6104403118832
effective search space used: 6104403118832
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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