Clone Information

BLAST Search Result

Clone Name	rbastl26d05
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)	84	6e-17
2	LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)	76	2e-14
3	LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygena...	75	4e-14
4	LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase...	73	1e-13
5	LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)	66	2e-11
6	LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)	52	3e-07
7	LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)	52	3e-07
8	LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)	52	3e-07
9	LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)	52	4e-07
10	LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)	50	2e-06
11	LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)	49	2e-06
12	LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)	49	4e-06
13	LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)	49	4e-06
14	LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)	48	6e-06
15	LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)	47	1e-05
16	LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)	45	3e-05
17	LOXB_PHAVU (P27481) Lipoxygenase (EC 1.13.11.12) (Fragment)	44	7e-05
18	LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)	44	1e-04
19	LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)	42	5e-04
20	LOX23_HORVU (Q8GSM2) Lipoxygenase 2.3, chloroplast precursor (EC...	40	0.002
21	LOX5_ORYSA (Q7XV13) Putative lipoxygenase 5 (EC 1.13.11.12)	37	0.009
22	LOX21_HORVU (P93184) Lipoxygenase 2.1, chloroplast precursor (EC...	37	0.015
23	LOX6_ORYSA (Q8H016) Probable lipoxygenase 6 (EC 1.13.11.12)	36	0.025
24	LOXC1_ORYSA (P38419) Lipoxygenase 7, chloroplast precursor (EC 1...	34	0.096
25	LOXC2_ORYSA (Q84YK8) Probable lipoxygenase 8, chloroplast precur...	33	0.13
26	LOXC_ARATH (P38418) Lipoxygenase, chloroplast precursor (EC 1.13...	32	0.28
27	SYP_MYCTU (O05814) Prolyl-tRNA synthetase (EC 6.1.1.15) (Proline...	31	0.62
28	LOX22_HORVU (Q8GSM3) Lipoxygenase 2.2, chloroplast precursor (EC...	30	1.1
29	SEPP1_PONPY (Q5R8W9) Selenoprotein P precursor (SeP)	30	1.1
30	SEPP1_HUMAN (P49908) Selenoprotein P precursor (SeP)	30	1.1
31	E74EA_DROME (P20105) Ecdysone-induced protein 74EF isoform A (ET...	29	2.4
32	FOXJ3_MOUSE (Q8BUR3) Forkhead box protein J3	29	2.4
33	E74EB_DROME (P11536) Ecdysone-induced protein 74EF isoform B (ET...	29	2.4
34	CX017_HUMAN (Q9NX05) Protein CXorf17 (Tumor antigen BJ-HCC-21)	29	3.1
35	KNOB_PLAFN (P06719) Knob-associated histidine-rich protein precu...	28	4.0
36	NORR_SALTY (Q8ZMJ8) Anaerobic nitric oxide reductase transcripti...	28	4.0
37	NORR_SALTI (Q8Z4C6) Anaerobic nitric oxide reductase transcripti...	28	4.0
38	CAUP_DROME (P54269) Homeobox protein caupolican	28	5.3
39	ALR1_SALTY (P0A1A3) Alanine racemase, biosynthetic (EC 5.1.1.1)	28	5.3
40	ALR1_SALTI (P0A1A4) Alanine racemase, biosynthetic (EC 5.1.1.1)	28	5.3
41	Y2848_STRCO (Q9RDA3) UPF0303 protein SCO2848	28	5.3
42	ARNT_MOUSE (P53762) Aryl hydrocarbon receptor nuclear translocat...	23	6.5
43	NOTC2_MOUSE (O35516) Neurogenic locus notch homolog protein 2 pr...	28	6.9
44	GOR_HUMAN (Q8IX06) Exonuclease GOR (EC 3.1.-.-) (Antigen GOR) (R...	28	6.9
45	GOR_PANTR (P48778) Exonuclease GOR (EC 3.1.-.-) (Antigen GOR) (R...	28	6.9
46	NOTC2_HUMAN (Q04721) Neurogenic locus notch homolog protein 2 pr...	28	6.9
47	ARNT_RAT (P41739) Aryl hydrocarbon receptor nuclear translocator...	27	9.0
48	YTRP_PSEPU (P40604) Hypothetical 62.7 kDa protein in trpE-trpG i...	27	9.0
49	SSB_SHEON (Q8EA81) Single-stranded DNA-binding protein (SSB) (He...	27	9.0
50	E74EF_DROVI (Q7M3M6) Ecdysone-induced protein 74EF (ETS-related ...	27	9.0
51	THII_HALSA (Q9HQ72) Probable thiamine biosynthesis protein thiI	27	9.0
52	KPTA_BURS3 (Q395F2) Probable RNA 2'-phosphotransferase (EC 2.7.-.-)	27	9.0

>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)|
          Length = 862

 Score = 84.3 bits (207), Expect = 6e-17
 Identities = 39/48 (81%), Positives = 41/48 (85%)
 Frame = -2

Query: 399 VAMNSHPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 256
           V MN  P+LKNR GPAKFPYMLLYPNTSDH G A GLTA+GIPNSISI
Sbjct: 815 VGMNHDPELKNRNGPAKFPYMLLYPNTSDHKGAAAGLTAKGIPNSISI 862

to top

>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)|
          Length = 866

 Score = 75.9 bits (185), Expect = 2e-14
 Identities = 36/48 (75%), Positives = 39/48 (81%)
 Frame = -2

Query: 399 VAMNSHPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 256
           V MN    LKNR GPA+FPYMLLYPNTSD TG A G+TA+GIPNSISI
Sbjct: 819 VGMNGDAGLKNRNGPAEFPYMLLYPNTSDVTGAAAGITAKGIPNSISI 866

to top

>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)|
          Length = 863

 Score = 75.1 bits (183), Expect = 4e-14
 Identities = 34/46 (73%), Positives = 38/46 (82%)
 Frame = -2

Query: 393 MNSHPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 256
           MN  P LKNR GPA FPY L++PNTSD+ G AEG+TARGIPNSISI
Sbjct: 818 MNKDPLLKNRVGPANFPYTLMFPNTSDNKGAAEGITARGIPNSISI 863

to top

>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)|
          Length = 870

 Score = 73.2 bits (178), Expect = 1e-13
 Identities = 35/48 (72%), Positives = 36/48 (75%)
 Frame = -2

Query: 399 VAMNSHPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 256
           VAMN  P  KNR GP  FPY LLYPNTSD  G A GL+ARGIPNSISI
Sbjct: 823 VAMNKDPHRKNRVGPTNFPYTLLYPNTSDLKGDAAGLSARGIPNSISI 870

to top

>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)|
          Length = 877

 Score = 65.9 bits (159), Expect = 2e-11
 Identities = 33/47 (70%), Positives = 36/47 (76%), Gaps = 1/47 (2%)
 Frame = -2

Query: 393 MNSHPQLKNRTGPAKFPYMLLYPNTSDHTGQ-AEGLTARGIPNSISI 256
           MN +  LKNR GP K PYMLLYPNTSD T +  +GLTA GIPNSISI
Sbjct: 831 MNGNSALKNRNGPVKMPYMLLYPNTSDVTKEKGQGLTAMGIPNSISI 877

to top

>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)|
          Length = 864

 Score = 52.4 bits (124), Expect = 3e-07
 Identities = 27/47 (57%), Positives = 30/47 (63%)
 Frame = -2

Query: 396 AMNSHPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 256
           A NS P L+NRTGP + PY LL      H    EGLT +GIPNSISI
Sbjct: 824 ARNSDPSLRNRTGPVQLPYTLL------HRSSEEGLTFKGIPNSISI 864

to top

>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)|
          Length = 859

 Score = 52.4 bits (124), Expect = 3e-07
 Identities = 25/46 (54%), Positives = 30/46 (65%)
 Frame = -2

Query: 393 MNSHPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 256
           MNSH   KNR+GP   PY LL+P +       EGLT +GIPNS+SI
Sbjct: 820 MNSHKSWKNRSGPVNVPYTLLFPTSE------EGLTGKGIPNSVSI 859

to top

>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)|
          Length = 853

 Score = 52.0 bits (123), Expect = 3e-07
 Identities = 27/48 (56%), Positives = 31/48 (64%)
 Frame = -2

Query: 399 VAMNSHPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 256
           +  N    L+NR GPAK PY LLYP++       EGLT RGIPNSISI
Sbjct: 812 IEKNKDETLRNRYGPAKMPYTLLYPSSE------EGLTFRGIPNSISI 853

to top

>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)|
          Length = 866

 Score = 51.6 bits (122), Expect = 4e-07
 Identities = 26/45 (57%), Positives = 30/45 (66%)
 Frame = -2

Query: 390 NSHPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 256
           N+   L+NR GP K PY LLYP++       EGLT RGIPNSISI
Sbjct: 828 NNDESLRNRYGPVKMPYTLLYPSSE------EGLTCRGIPNSISI 866

to top

>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)|
          Length = 861

 Score = 49.7 bits (117), Expect = 2e-06
 Identities = 25/45 (55%), Positives = 31/45 (68%)
 Frame = -2

Query: 390 NSHPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 256
           N+  +L+NR GP + PY LLYP++       EGLT RGIPNSISI
Sbjct: 823 NNDEKLRNRHGPVEMPYTLLYPSSK------EGLTFRGIPNSISI 861

to top

>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)|
          Length = 865

 Score = 49.3 bits (116), Expect = 2e-06
 Identities = 25/45 (55%), Positives = 29/45 (64%)
 Frame = -2

Query: 390 NSHPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 256
           N+   L NR GP + PY LL+PN       +EGLT RGIPNSISI
Sbjct: 828 NNDQSLSNRLGPVQLPYTLLHPN-------SEGLTCRGIPNSISI 865

to top

>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)|
          Length = 862

 Score = 48.5 bits (114), Expect = 4e-06
 Identities = 25/45 (55%), Positives = 27/45 (60%)
 Frame = -2

Query: 390 NSHPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 256
           N    L+NR GP K PY +L P   D     EGLT RGIPNSISI
Sbjct: 823 NKDSSLRNRNGPVKMPYTVLLPTCED-----EGLTFRGIPNSISI 862

to top

>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)|
          Length = 839

 Score = 48.5 bits (114), Expect = 4e-06
 Identities = 27/49 (55%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
 Frame = -2

Query: 399 VAMNSHPQLK-NRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 256
           V  N+ P L+ NR GP + PY LLYP++       EGLT RGIPNSISI
Sbjct: 797 VRRNNDPSLQGNRLGPVQLPYTLLYPSSE------EGLTFRGIPNSISI 839

to top

>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)|
          Length = 864

 Score = 47.8 bits (112), Expect = 6e-06
 Identities = 24/45 (53%), Positives = 30/45 (66%)
 Frame = -2

Query: 390 NSHPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 256
           N+ P L +R GP + PY LL+P++       EGLT RGIPNSISI
Sbjct: 826 NNDPSLYHRVGPVQLPYTLLHPSSK------EGLTFRGIPNSISI 864

to top

>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)|
          Length = 857

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 24/45 (53%), Positives = 30/45 (66%)
 Frame = -2

Query: 390 NSHPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 256
           N+  +L+NR GP + PY LL P++       EGLT RGIPNSISI
Sbjct: 819 NNDEKLRNRCGPVQMPYTLLLPSSK------EGLTFRGIPNSISI 857

to top

>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)|
          Length = 859

 Score = 45.4 bits (106), Expect = 3e-05
 Identities = 23/45 (51%), Positives = 28/45 (62%)
 Frame = -2

Query: 390 NSHPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 256
           N    LKNRTG  K PY LL+P++        G+T RGIPNS+SI
Sbjct: 821 NDDETLKNRTGLVKMPYTLLFPSSEG------GVTGRGIPNSVSI 859

to top

>LOXB_PHAVU (P27481) Lipoxygenase (EC 1.13.11.12) (Fragment)|
          Length = 741

 Score = 44.3 bits (103), Expect = 7e-05
 Identities = 23/42 (54%), Positives = 27/42 (64%)
 Frame = -2

Query: 399 VAMNSHPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGI 274
           V  N+   L+NRTGPAK PY LLYP++       EGLT RGI
Sbjct: 706 VQKNNDETLRNRTGPAKMPYTLLYPSSE------EGLTFRGI 741

to top

>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)|
          Length = 860

 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 22/45 (48%), Positives = 27/45 (60%)
 Frame = -2

Query: 390 NSHPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 256
           N +  L NRTGP   PY LL+P +        GLT +GIPNS+SI
Sbjct: 822 NGNNILTNRTGPVNAPYTLLFPTSEG------GLTGKGIPNSVSI 860

to top

>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)|
          Length = 861

 Score = 41.6 bits (96), Expect = 5e-04
 Identities = 21/48 (43%), Positives = 27/48 (56%)
 Frame = -2

Query: 399 VAMNSHPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 256
           +  N    L NR+GP   PY LL+P +        GLT +GIPNS+SI
Sbjct: 820 IQRNGDNILTNRSGPVNAPYTLLFPTSEG------GLTGKGIPNSVSI 861

to top

>LOX23_HORVU (Q8GSM2) Lipoxygenase 2.3, chloroplast precursor (EC 1.13.11.12)|
           (LOX2:Hv:3)
          Length = 896

 Score = 39.7 bits (91), Expect = 0.002
 Identities = 22/45 (48%), Positives = 27/45 (60%)
 Frame = -2

Query: 390 NSHPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 256
           N++P+ KNR G    PY LL P +        G+T RGIPNSISI
Sbjct: 858 NNNPENKNRCGAGIVPYELLKPFSEP------GVTGRGIPNSISI 896

to top

>LOX5_ORYSA (Q7XV13) Putative lipoxygenase 5 (EC 1.13.11.12)|
          Length = 899

 Score = 37.4 bits (85), Expect = 0.009
 Identities = 17/45 (37%), Positives = 26/45 (57%)
 Frame = -2

Query: 390 NSHPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 256
           N+ P  +NR G    PY L+ P++        G+T RG+PNS++I
Sbjct: 861 NADPSRRNRCGAGVLPYELMAPSSGP------GITCRGVPNSVTI 899

to top

>LOX21_HORVU (P93184) Lipoxygenase 2.1, chloroplast precursor (EC 1.13.11.12)|
            (LOX-100) (LOX2:Hv:1)
          Length = 936

 Score = 36.6 bits (83), Expect = 0.015
 Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
 Frame = -2

Query: 390  NSHPQLKNRTGPAKFPYMLLYPNTSDHTG----QAEGLTARGIPNSISI 256
            N+ P  KNR G    PY+LL P+  D T       + +   GIPNSISI
Sbjct: 888  NNDPDRKNRHGAGMVPYVLLRPSDGDPTDGDPTDEKMVMEMGIPNSISI 936

to top

>LOX6_ORYSA (Q8H016) Probable lipoxygenase 6 (EC 1.13.11.12)|
          Length = 918

 Score = 35.8 bits (81), Expect = 0.025
 Identities = 19/39 (48%), Positives = 23/39 (58%)
 Frame = -2

Query: 372 KNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 256
           KNR G    PY LL P++        G+T RG+PNSISI
Sbjct: 886 KNRCGAGVLPYELLAPSSPP------GVTCRGVPNSISI 918

to top

>LOXC1_ORYSA (P38419) Lipoxygenase 7, chloroplast precursor (EC 1.13.11.12)|
          Length = 924

 Score = 33.9 bits (76), Expect = 0.096
 Identities = 19/45 (42%), Positives = 23/45 (51%)
 Frame = -2

Query: 390  NSHPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 256
            N   +LKNR G    PY L+ P +        G+T  GIPNS SI
Sbjct: 886  NKDRKLKNRCGAGILPYQLMKPFSD------SGVTGMGIPNSTSI 924

to top

>LOXC2_ORYSA (Q84YK8) Probable lipoxygenase 8, chloroplast precursor (EC|
            1.13.11.12)
          Length = 941

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 19/45 (42%), Positives = 23/45 (51%)
 Frame = -2

Query: 390  NSHPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 256
            N   +LKNR G    PY L+ P +        G+T  GIPNS SI
Sbjct: 903  NKDRKLKNRCGAGILPYQLMKPFSD------AGVTGMGIPNSTSI 941

to top

>LOXC_ARATH (P38418) Lipoxygenase, chloroplast precursor (EC 1.13.11.12)|
          Length = 896

 Score = 32.3 bits (72), Expect = 0.28
 Identities = 21/45 (46%), Positives = 25/45 (55%)
 Frame = -2

Query: 390 NSHPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 256
           N +  LKNR G     Y LL P TS+H     G+T  G+P SISI
Sbjct: 858 NVNITLKNRAGAGVVKYELLKP-TSEH-----GVTGMGVPYSISI 896

to top

>SYP_MYCTU (O05814) Prolyl-tRNA synthetase (EC 6.1.1.15) (Proline--tRNA|
           ligase) (ProRS)
          Length = 582

 Score = 31.2 bits (69), Expect = 0.62
 Identities = 20/40 (50%), Positives = 23/40 (57%)
 Frame = +1

Query: 235 TTDVLRSDGYAVRDAPGGEPLGLSRVVGGVWVEQHVWELG 354
           T DVL  DG  VR   G   +G+SR+V  V  EQH  ELG
Sbjct: 438 TADVLGEDGKPVRLTMGSYGIGVSRLV-AVVAEQHHDELG 476

to top

>LOX22_HORVU (Q8GSM3) Lipoxygenase 2.2, chloroplast precursor (EC 1.13.11.12)|
            (LOX2:Hv:2)
          Length = 932

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 18/45 (40%), Positives = 24/45 (53%)
 Frame = -2

Query: 390  NSHPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 256
            N     +NR G    PY+LL P  + +   A+ +   GIPNSISI
Sbjct: 889  NKDDSRRNRHGAGVVPYVLLRP-LNGNPMDAKTVMEMGIPNSISI 932

to top

>SEPP1_PONPY (Q5R8W9) Selenoprotein P precursor (SeP)|
          Length = 381

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 15/30 (50%), Positives = 16/30 (53%)
 Frame = -1

Query: 358 AGQVPIHAALPKHLRPHGTGRGAHRQGHPE 269
           A   P H A P  L  H   +G HRQGHPE
Sbjct: 231 APDAPTHPA-PPGLHHHHKHKGQHRQGHPE 259

to top

>SEPP1_HUMAN (P49908) Selenoprotein P precursor (SeP)|
          Length = 381

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 15/30 (50%), Positives = 16/30 (53%)
 Frame = -1

Query: 358 AGQVPIHAALPKHLRPHGTGRGAHRQGHPE 269
           A   P H A P  L  H   +G HRQGHPE
Sbjct: 231 APNAPTHPA-PPGLHHHHKHKGQHRQGHPE 259

to top

>E74EA_DROME (P20105) Ecdysone-induced protein 74EF isoform A (ETS-related|
           protein E74A)
          Length = 829

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 25/75 (33%), Positives = 34/75 (45%), Gaps = 7/75 (9%)
 Frame = +2

Query: 98  MPIRPVVHAPLLP*LFMHRHNSLSHTHT-------PASSGVSKQG*HKSMRSRRRTCSDQ 256
           +P RP++H  L      + H+    T T       PA SGVS      S  S  + C+D+
Sbjct: 387 IPQRPLLHNLLSGGAIHNPHHRNYTTATTGSFPPSPADSGVSDVD---SSSSGGQPCADE 443

Query: 257 MDMLFGMPLAVSPSA 301
           +    GMP A S SA
Sbjct: 444 LKARLGMPPATSASA 458

to top

>FOXJ3_MOUSE (Q8BUR3) Forkhead box protein J3|
          Length = 623

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 4/47 (8%)
 Frame = -1

Query: 382 PAAQEPHRAGQVPIHAALPKHLRPHGTGRG----AHRQGHPEQHIHL 254
           P+   PHR   +P H   P+H  PH          H Q HP  H H+
Sbjct: 380 PSPHTPHRPHGLPQHPQRPQHPAPHPQQHSQLQPPHSQ-HPPPHQHI 425

to top

>E74EB_DROME (P11536) Ecdysone-induced protein 74EF isoform B (ETS-related|
           protein E74B)
          Length = 883

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 25/75 (33%), Positives = 34/75 (45%), Gaps = 7/75 (9%)
 Frame = +2

Query: 98  MPIRPVVHAPLLP*LFMHRHNSLSHTHT-------PASSGVSKQG*HKSMRSRRRTCSDQ 256
           +P RP++H  L      + H+    T T       PA SGVS      S  S  + C+D+
Sbjct: 441 IPQRPLLHNLLSGGAIHNPHHRNYTTATTGSFPPSPADSGVSDVD---SSSSGGQPCADE 497

Query: 257 MDMLFGMPLAVSPSA 301
           +    GMP A S SA
Sbjct: 498 LKARLGMPPATSASA 512

to top

>CX017_HUMAN (Q9NX05) Protein CXorf17 (Tumor antigen BJ-HCC-21)|
          Length = 1096

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 18/45 (40%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
 Frame = -1

Query: 388 LAPAAQEPHRAGQVPIHAALPKH-LRPHGTGRGAHRQGHPEQHIH 257
           LAP A    R G VP+   LP   L  +  G G  R  HP  H H
Sbjct: 49  LAPGAPRAAR-GSVPLQPPLPPAALGAYSGGAGPTRHHHPAHHFH 92

to top

>KNOB_PLAFN (P06719) Knob-associated histidine-rich protein precursor (KAHRP)|
          Length = 657

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 14/46 (30%), Positives = 19/46 (41%)
 Frame = -1

Query: 394 HELAPAAQEPHRAGQVPIHAALPKHLRPHGTGRGAHRQGHPEQHIH 257
           H+    A   H  G+V  H A   H + HG  +  H   H   H+H
Sbjct: 79  HQAPHQAHHHHHHGEVN-HQAPQVHQQVHGQDQAHHHHHHHHHHLH 123

to top

>NORR_SALTY (Q8ZMJ8) Anaerobic nitric oxide reductase transcription regulator|
           norR
          Length = 506

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = +1

Query: 295 LGLSRVVGGVWVEQHVWELGRPGAVLELRVRVH 393
           LGLSRVV      +H+   G PG V EL   +H
Sbjct: 380 LGLSRVVLSPGARRHLLNYGWPGNVRELEHAIH 412

to top

>NORR_SALTI (Q8Z4C6) Anaerobic nitric oxide reductase transcription regulator|
           norR
          Length = 506

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = +1

Query: 295 LGLSRVVGGVWVEQHVWELGRPGAVLELRVRVH 393
           LGLSRVV      +H+   G PG V EL   +H
Sbjct: 380 LGLSRVVLSPGARRHLLNYGWPGNVRELEHAIH 412

to top

>CAUP_DROME (P54269) Homeobox protein caupolican|
          Length = 693

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 17/44 (38%), Positives = 21/44 (47%)
 Frame = -1

Query: 388 LAPAAQEPHRAGQVPIHAALPKHLRPHGTGRGAHRQGHPEQHIH 257
           LAP A  P   G  P+HAA   + + H T    H   HP+Q  H
Sbjct: 367 LAPYATPP---GAHPMHAAYSSYAQSHNT----HTHPHPQQMQH 403

to top

>ALR1_SALTY (P0A1A3) Alanine racemase, biosynthetic (EC 5.1.1.1)|
          Length = 359

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 16/36 (44%), Positives = 18/36 (50%)
 Frame = +1

Query: 247 LRSDGYAVRDAPGGEPLGLSRVVGGVWVEQHVWELG 354
           L S   AVRD   GEP+G     GG WV +    LG
Sbjct: 237 LTSSLIAVRDHKAGEPVG----YGGTWVSERDTRLG 268

to top

>ALR1_SALTI (P0A1A4) Alanine racemase, biosynthetic (EC 5.1.1.1)|
          Length = 359

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 16/36 (44%), Positives = 18/36 (50%)
 Frame = +1

Query: 247 LRSDGYAVRDAPGGEPLGLSRVVGGVWVEQHVWELG 354
           L S   AVRD   GEP+G     GG WV +    LG
Sbjct: 237 LTSSLIAVRDHKAGEPVG----YGGTWVSERDTRLG 268

to top

>Y2848_STRCO (Q9RDA3) UPF0303 protein SCO2848|
          Length = 158

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 13/20 (65%), Positives = 14/20 (70%)
 Frame = -1

Query: 385 APAAQEPHRAGQVPIHAALP 326
           AP A + HRAGQ   HAALP
Sbjct: 46  APVAIDIHRAGQQLFHAALP 65

to top

>ARNT_MOUSE (P53762) Aryl hydrocarbon receptor nuclear translocator (ARNT|
           protein) (Dioxin receptor, nuclear translocator)
           (Hypoxia-inducible factor 1 beta) (HIF-1 beta)
          Length = 791

 Score = 23.1 bits (48), Expect(2) = 6.5
 Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
 Frame = -1

Query: 289 HRQGHPEQHIHLI*ARPSSRPHAF--VLSLL 203
           HR    EQH+    A+  S+P  F  +LS+L
Sbjct: 738 HRSSSSEQHVQQTQAQAPSQPEVFQEMLSML 768



 Score = 23.1 bits (48), Expect(2) = 6.5
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = -2

Query: 387 SHPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGI 274
           ++P L NR   + FP     P T   TGQ +  TA G+
Sbjct: 695 AYPALPNRG--SNFP-----PETGQTTGQFQARTAEGV 725

to top

>NOTC2_MOUSE (O35516) Neurogenic locus notch homolog protein 2 precursor (Notch|
           2) (Motch B) [Contains: Notch 2 extracellular
           truncation; Notch 2 intracellular domain]
          Length = 2470

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = -2

Query: 171 CDRELCRCMNN*GNKGACTTGLIGMRKLSSAGYRSMHRRVQK 46
           C  ++  C++N    G CT GL G + L  AG+  ++  V K
Sbjct: 715 CYSQVNECLSNPCIHGNCTGGLSGYKCLCDAGWVGVNCEVDK 756

to top

>GOR_HUMAN (Q8IX06) Exonuclease GOR (EC 3.1.-.-) (Antigen GOR) (RNA|
           exonuclease 1 homolog-like)
          Length = 318

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -3

Query: 386 RTRSSRTAPGRPSSHTCCS 330
           R RSS+ A GR S +TCC+
Sbjct: 84  RVRSSQVAGGRVSQYTCCA 102

to top

>GOR_PANTR (P48778) Exonuclease GOR (EC 3.1.-.-) (Antigen GOR) (RNA|
           exonuclease 1 homolog-like)
          Length = 427

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -3

Query: 386 RTRSSRTAPGRPSSHTCCS 330
           R RSS+ A GR S +TCC+
Sbjct: 84  RVRSSQVAGGRVSQYTCCA 102

to top

>NOTC2_HUMAN (Q04721) Neurogenic locus notch homolog protein 2 precursor (Notch|
           2) (hN2) [Contains: Notch 2 extracellular truncation;
           Notch 2 intracellular domain]
          Length = 2471

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = -2

Query: 171 CDRELCRCMNN*GNKGACTTGLIGMRKLSSAGYRSMHRRVQK 46
           C  ++  C++N    G CT GL G + L  AG+  ++  V K
Sbjct: 717 CYSQVNECLSNPCIHGNCTGGLSGYKCLCDAGWVGINCEVDK 758

to top

>ARNT_RAT (P41739) Aryl hydrocarbon receptor nuclear translocator (ARNT|
           protein) (Dioxin receptor, nuclear translocator)
           (Hypoxia-inducible factor 1 beta) (HIF-1 beta)
          Length = 800

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
 Frame = -1

Query: 289 HRQGHPEQHIHLI*ARPSSRPHAF--VLSLL 203
           HR    EQH+    A+PSS+P  F  +LS+L
Sbjct: 747 HRSSSNEQHVQPTSAQPSSQPEVFQEMLSML 777

to top

>YTRP_PSEPU (P40604) Hypothetical 62.7 kDa protein in trpE-trpG intergenic|
           region precursor
          Length = 592

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 13/43 (30%), Positives = 18/43 (41%)
 Frame = +1

Query: 271 RDAPGGEPLGLSRVVGGVWVEQHVWELGRPGAVLELRVRVHGH 399
           R    G+  G +  VGG +     W LG  G V   ++   GH
Sbjct: 368 RAGASGDGRGYNLTVGGSYRLNDAWRLGLAGGVYRQKLEAGGH 410

to top

>SSB_SHEON (Q8EA81) Single-stranded DNA-binding protein (SSB)|
           (Helix-destabilizing protein)
          Length = 238

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 16/60 (26%), Positives = 25/60 (41%)
 Frame = -1

Query: 400 GGHELAPAAQEPHRAGQVPIHAALPKHLRPHGTGRGAHRQGHPEQHIHLI*ARPSSRPHA 221
           GG++ AP    P +    P   A P +  P    +  + Q   +Q      A+P  +PHA
Sbjct: 131 GGYQSAPQQAAPAQNQYAPAPQAAPAYQAPAPQPQSGYNQPPAQQSYGQQQAQPHVQPHA 190

to top

>E74EF_DROVI (Q7M3M6) Ecdysone-induced protein 74EF (ETS-related protein E74A)|
          Length = 873

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 7/75 (9%)
 Frame = +2

Query: 98  MPIRPVVHAPLLP*LFMHRHNSLSHTHT-------PASSGVSKQG*HKSMRSRRRTCSDQ 256
           +P RP++H  L      + H+    T T       PA SGVS      S  S  + C+D+
Sbjct: 430 IPHRPLLHNLLSGGAIHNPHHRNYTTATTGSFPPSPADSGVSDVD---SSSSGGQPCADE 486

Query: 257 MDMLFGMPLAVSPSA 301
           +    GMP   + SA
Sbjct: 487 LKARLGMPTTAATSA 501

to top

>THII_HALSA (Q9HQ72) Probable thiamine biosynthesis protein thiI|
          Length = 392

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 5/37 (13%)
 Frame = +1

Query: 271 RDAPGGEPLG-----LSRVVGGVWVEQHVWELGRPGA 366
           RD PGG PLG     ++ V GG+      WE  R GA
Sbjct: 170 RDGPGGMPLGTQQPLVALVSGGIDSPVAAWESMRRGA 206

to top

>KPTA_BURS3 (Q395F2) Probable RNA 2'-phosphotransferase (EC 2.7.-.-)|
          Length = 194

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +1

Query: 88  ELPHADQTRRARTLIALIIHAPAQLSV 168
           ELP  D TR +RTL  L+ HAP  + +
Sbjct: 7   ELPAPDATRISRTLSYLLRHAPQTIGL 33


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,888,669
Number of Sequences: 219361
Number of extensions: 1299259
Number of successful extensions: 3483
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 3340
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3453
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 1365190992
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

to top

full-length cDNA and EST

Clone Information

BLAST Search Result