ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl26d03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 165 2e-37
2dbj|AK067635.1| Oryza sativa (japonica cultivar-group) cDNA clon... 165 2e-37
3gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 165 2e-37
4emb|AL928748.4|CNS08CBL Oryza sativa chromosome 12, . BAC OSJNBb... 165 2e-37
5gb|AC026523.9| Homo sapiens chromosome 15, clone RP11-461F11, co... 50 0.006
6emb|BX005085.11| Zebrafish DNA sequence from clone CH211-225F23 ... 46 0.096
7emb|BX088547.12| Zebrafish DNA sequence from clone DKEY-238O14, ... 46 0.096
8emb|BX005367.10| Zebrafish DNA sequence from clone DKEY-97L20 in... 46 0.096
9emb|CR792418.18| Zebrafish DNA sequence from clone DKEY-59L11 in... 46 0.096
10emb|AL117259.6|CNS01DRJ Human chromosome 14 DNA sequence BAC R-3... 44 0.38
11emb|AL121838.4|CNS01DSP Human chromosome 14 DNA sequence BAC C-2... 44 0.38
12gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.5
13ref|XM_648594.1| Entamoeba histolytica HM-1:IMSS phosphoglycerat... 42 1.5
14gb|AC158585.3| Mus musculus chromosome 5, clone RP24-250F5, comp... 42 1.5
15gb|DQ361273.1| Artemia franciscana small heat shock protein ArHs... 42 1.5
16gb|AC120128.17| Mus musculus chromosome 5, clone RP23-181F22, co... 42 1.5
17gb|AC137634.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
18gb|AC137072.2| Genomic sequence for Oryza sativa, Nipponbare str... 42 1.5
19dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
20emb|BX119955.10| Mouse DNA sequence from clone RP23-359O12 on ch... 42 1.5
21gb|AC005411.1|AC005411 Homo sapiens chromosome 17, clone hRPK.72... 42 1.5
22gb|AC107762.8| Mus musculus chromosome 1, clone RP23-183L12, com... 40 5.9
23ref|XM_631366.1| Dictyostelium discoideum homeodomain (HOX) cont... 40 5.9
24gb|AC101738.16| Mus musculus chromosome 1, clone RP23-472N5, com... 40 5.9
25gb|AC132331.3| Mus musculus BAC clone RP24-217D10 from chromosom... 40 5.9
26gb|AC133892.9| Mus musculus chromosome 1, clone RP23-279J5, comp... 40 5.9
27emb|CR391905.6| Zebrafish DNA sequence from clone DKEY-16P7 in l... 40 5.9
28gb|AC162299.6| Mus musculus chromosome 1, clone RP24-320H7, comp... 40 5.9
29gb|AC140078.8| Homo sapiens 12 BAC RP13-7D7 (Roswell Park Cancer... 40 5.9
30emb|AL021684.1|ATF6H11 Arabidopsis thaliana DNA chromosome 5, BA... 40 5.9
31gb|AC163436.3| Mus musculus chromosome 1, clone RP23-102H12, com... 40 5.9
32gb|AE006465.1| Homo sapiens 16p13.3 sequence section 4 of 8 40 5.9
33gb|AC006954.8| Arabidopsis thaliana chromosome 2 clone F25P17 ma... 40 5.9
34gb|AC013509.5|AC013509 Homo sapiens chromosome , clone RP11-115I... 40 5.9
35gb|AC148676.1| Macaca mulatta Major Histocompatibility Complex B... 40 5.9
36gb|AC148668.1| Macaca mulatta Major Histocompatibility Complex B... 40 5.9
37gb|AC009041.10| Homo sapiens chromosome 16 clone RP11-161M6, com... 40 5.9
38emb|BX248117.9| Zebrafish DNA sequence from clone CH211-226D5, c... 40 5.9
39gb|AC011716.7|AC011716 Homo sapiens chromosome 8 clone RP11-65D1... 40 5.9
40dbj|AB010075.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 5.9
41gb|AC102900.12| Mus musculus chromosome 1, clone RP24-315J13, co... 40 5.9
42gb|AE017143.1| Haemophilus ducreyi strain 35000HP complete genome 40 5.9
43emb|Z92845.1|HS443D9 Human DNA sequence from clone LA16c-443D9 o... 40 5.9 
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score =  165 bits (83), Expect = 2e-37
 Identities = 185/219 (84%)
 Strand = Plus / Plus

                                                                           
Query: 220     tcactttgcgttggcgagcaaccttaagacgttgcgcatcttcggccgagcatcgggaga 279
               |||||||||||||   |||| ||| |||||| |||||||||| || |||||||| |||||
Sbjct: 4177928 tcactttgcgttgaatagcatcctcaagacggtgcgcatctttggtcgagcatctggaga 4177987

                                                                           
Query: 280     gaaagtaacacaggagagcgcaatattgaggactgacagcatctgactgtgaacaccaac 339
               ||  | |||||| | ||| || || || ||||| |||| |||||| ||||||||| || |
Sbjct: 4177988 gagcgcaacacaagcgagggcgatgttcaggaccgacaacatctggctgtgaacagcagc 4178047

                                                                           
Query: 340     tgaagtccttgagaccctggtgtcagggacctgctccctttgctcaggcctagctgaaag 399
               |||||| |||||||||||||||||| ||| ||||||||| || ||||| ||  |||||||
Sbjct: 4178048 tgaagttcttgagaccctggtgtcaaggatctgctccctctgatcagggctgcctgaaag 4178107

                                                      
Query: 400     actgagagcccacttggctagctccatgccatcactgac 438
               ||| |||||||||||||||| ||| ||||||||||||||
Sbjct: 4178108 actcagagcccacttggctaactcgatgccatcactgac 4178146



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 56/64 (87%), Gaps = 2/64 (3%)
 Strand = Plus / Plus

                                                                           
Query: 134     ctgacatccacaaactaag-aaaatg-tcagattccatccagaacttatctaacctacca 191
               ||||||||||||||||||| |||||| ||| | ||||| |||||| || |||| ||||||
Sbjct: 4177851 ctgacatccacaaactaagcaaaatgatcaaactccattcagaacctacctaagctacca 4177910

                   
Query: 192     aaac 195
               ||||
Sbjct: 4177911 aaac 4177914
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>dbj|AK067635.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013110A16, full
            insert sequence
          Length = 3609

 Score =  165 bits (83), Expect = 2e-37
 Identities = 185/219 (84%)
 Strand = Plus / Minus

                                                                        
Query: 220  tcactttgcgttggcgagcaaccttaagacgttgcgcatcttcggccgagcatcgggaga 279
            |||||||||||||   |||| ||| |||||| |||||||||| || |||||||| |||||
Sbjct: 3102 tcactttgcgttgaatagcatcctcaagacggtgcgcatctttggtcgagcatctggaga 3043

                                                                        
Query: 280  gaaagtaacacaggagagcgcaatattgaggactgacagcatctgactgtgaacaccaac 339
            ||  | |||||| | ||| || || || ||||| |||| |||||| ||||||||| || |
Sbjct: 3042 gagcgcaacacaagcgagggcgatgttcaggaccgacaacatctggctgtgaacagcagc 2983

                                                                        
Query: 340  tgaagtccttgagaccctggtgtcagggacctgctccctttgctcaggcctagctgaaag 399
            |||||| |||||||||||||||||| ||| ||||||||| || ||||| ||  |||||||
Sbjct: 2982 tgaagttcttgagaccctggtgtcaaggatctgctccctctgatcagggctgcctgaaag 2923

                                                   
Query: 400  actgagagcccacttggctagctccatgccatcactgac 438
            ||| |||||||||||||||| ||| ||||||||||||||
Sbjct: 2922 actcagagcccacttggctaactcgatgccatcactgac 2884



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 56/64 (87%), Gaps = 2/64 (3%)
 Strand = Plus / Minus

                                                                        
Query: 134  ctgacatccacaaactaag-aaaatg-tcagattccatccagaacttatctaacctacca 191
            ||||||||||||||||||| |||||| ||| | ||||| |||||| || |||| ||||||
Sbjct: 3179 ctgacatccacaaactaagcaaaatgatcaaactccattcagaacctacctaagctacca 3120

                
Query: 192  aaac 195
            ||||
Sbjct: 3119 aaac 3116
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  165 bits (83), Expect = 2e-37
 Identities = 185/219 (84%)
 Strand = Plus / Plus

                                                                           
Query: 220     tcactttgcgttggcgagcaaccttaagacgttgcgcatcttcggccgagcatcgggaga 279
               |||||||||||||   |||| ||| |||||| |||||||||| || |||||||| |||||
Sbjct: 4177915 tcactttgcgttgaatagcatcctcaagacggtgcgcatctttggtcgagcatctggaga 4177974

                                                                           
Query: 280     gaaagtaacacaggagagcgcaatattgaggactgacagcatctgactgtgaacaccaac 339
               ||  | |||||| | ||| || || || ||||| |||| |||||| ||||||||| || |
Sbjct: 4177975 gagcgcaacacaagcgagggcgatgttcaggaccgacaacatctggctgtgaacagcagc 4178034

                                                                           
Query: 340     tgaagtccttgagaccctggtgtcagggacctgctccctttgctcaggcctagctgaaag 399
               |||||| |||||||||||||||||| ||| ||||||||| || ||||| ||  |||||||
Sbjct: 4178035 tgaagttcttgagaccctggtgtcaaggatctgctccctctgatcagggctgcctgaaag 4178094

                                                      
Query: 400     actgagagcccacttggctagctccatgccatcactgac 438
               ||| |||||||||||||||| ||| ||||||||||||||
Sbjct: 4178095 actcagagcccacttggctaactcgatgccatcactgac 4178133



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 56/64 (87%), Gaps = 2/64 (3%)
 Strand = Plus / Plus

                                                                           
Query: 134     ctgacatccacaaactaag-aaaatg-tcagattccatccagaacttatctaacctacca 191
               ||||||||||||||||||| |||||| ||| | ||||| |||||| || |||| ||||||
Sbjct: 4177838 ctgacatccacaaactaagcaaaatgatcaaactccattcagaacctacctaagctacca 4177897

                   
Query: 192     aaac 195
               ||||
Sbjct: 4177898 aaac 4177901
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>emb|AL928748.4|CNS08CBL Oryza sativa chromosome 12, . BAC OSJNBb0092O07 of library OSJNBb from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 123469

 Score =  165 bits (83), Expect = 2e-37
 Identities = 185/219 (84%)
 Strand = Plus / Plus

                                                                          
Query: 220    tcactttgcgttggcgagcaaccttaagacgttgcgcatcttcggccgagcatcgggaga 279
              |||||||||||||   |||| ||| |||||| |||||||||| || |||||||| |||||
Sbjct: 120324 tcactttgcgttgaatagcatcctcaagacggtgcgcatctttggtcgagcatctggaga 120383

                                                                          
Query: 280    gaaagtaacacaggagagcgcaatattgaggactgacagcatctgactgtgaacaccaac 339
              ||  | |||||| | ||| || || || ||||| |||| |||||| ||||||||| || |
Sbjct: 120384 gagcgcaacacaagcgagggcgatgttcaggaccgacaacatctggctgtgaacagcagc 120443

                                                                          
Query: 340    tgaagtccttgagaccctggtgtcagggacctgctccctttgctcaggcctagctgaaag 399
              |||||| |||||||||||||||||| ||| ||||||||| || ||||| ||  |||||||
Sbjct: 120444 tgaagttcttgagaccctggtgtcaaggatctgctccctctgatcagggctgcctgaaag 120503

                                                     
Query: 400    actgagagcccacttggctagctccatgccatcactgac 438
              ||| |||||||||||||||| ||| ||||||||||||||
Sbjct: 120504 actcagagcccacttggctaactcgatgccatcactgac 120542



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 56/64 (87%), Gaps = 2/64 (3%)
 Strand = Plus / Plus

                                                                          
Query: 134    ctgacatccacaaactaag-aaaatg-tcagattccatccagaacttatctaacctacca 191
              ||||||||||||||||||| |||||| ||| | ||||| |||||| || |||| ||||||
Sbjct: 120247 ctgacatccacaaactaagcaaaatgatcaaactccattcagaacctacctaagctacca 120306

                  
Query: 192    aaac 195
              ||||
Sbjct: 120307 aaac 120310
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>gb|AC026523.9| Homo sapiens chromosome 15, clone RP11-461F11, complete sequence
          Length = 175770

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                       
Query: 41     ttcagtccaaaaaatatacacttaa 65
              |||||||||||||||||||||||||
Sbjct: 129038 ttcagtccaaaaaatatacacttaa 129014
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>emb|BX005085.11| Zebrafish DNA sequence from clone CH211-225F23 in linkage group 3,
             complete sequence
          Length = 172000

 Score = 46.1 bits (23), Expect = 0.096
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 63    taacaattcaaactcgtcaccaa 85
             |||||||||||||||||||||||
Sbjct: 17171 taacaattcaaactcgtcaccaa 17193
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>emb|BX088547.12| Zebrafish DNA sequence from clone DKEY-238O14, complete sequence
          Length = 256446

 Score = 46.1 bits (23), Expect = 0.096
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 63     taacaattcaaactcgtcaccaa 85
              |||||||||||||||||||||||
Sbjct: 190631 taacaattcaaactcgtcaccaa 190609
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>emb|BX005367.10| Zebrafish DNA sequence from clone DKEY-97L20 in linkage group 22,
             complete sequence
          Length = 243709

 Score = 46.1 bits (23), Expect = 0.096
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 63    taacaattcaaactcgtcaccaa 85
             |||||||||||||||||||||||
Sbjct: 82643 taacaattcaaactcgtcaccaa 82621
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>emb|CR792418.18| Zebrafish DNA sequence from clone DKEY-59L11 in linkage group 4, complete
              sequence
          Length = 263674

 Score = 46.1 bits (23), Expect = 0.096
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 63     taacaattcaaactcgtcaccaa 85
              |||||||||||||||||||||||
Sbjct: 226519 taacaattcaaactcgtcaccaa 226541
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>emb|AL117259.6|CNS01DRJ Human chromosome 14 DNA sequence BAC R-304M6 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 193301

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 199    ctgctttcttttgattcacatt 220
              ||||||||||||||||||||||
Sbjct: 184289 ctgctttcttttgattcacatt 184268
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>emb|AL121838.4|CNS01DSP Human chromosome 14 DNA sequence BAC C-2068J7 of library CalTech-D from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 99679

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 199   ctgctttcttttgattcacatt 220
             ||||||||||||||||||||||
Sbjct: 95530 ctgctttcttttgattcacatt 95551
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 208      tttgattcacattcactttgc 228
                |||||||||||||||||||||
Sbjct: 10161203 tttgattcacattcactttgc 10161183
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>ref|XM_648594.1| Entamoeba histolytica HM-1:IMSS phosphoglycerate kinase, putative
           (75.t00020) partial mRNA
          Length = 1248

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 151 agaaaatgtcagattccatccagaa 175
           ||||||||| |||||||||||||||
Sbjct: 351 agaaaatgttagattccatccagaa 375
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>gb|AC158585.3| Mus musculus chromosome 5, clone RP24-250F5, complete sequence
          Length = 158066

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 306   tgaggactgacagcatctgac 326
             |||||||||||||||||||||
Sbjct: 54861 tgaggactgacagcatctgac 54881
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>gb|DQ361273.1| Artemia franciscana small heat shock protein ArHsp21 (Hsp21) mRNA,
           complete cds
          Length = 774

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 200 tgctttcttttgattcacattcactttgc 228
           |||||||||||||||||| |||| |||||
Sbjct: 609 tgctttcttttgattcactttcaatttgc 581
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>gb|AC120128.17| Mus musculus chromosome 5, clone RP23-181F22, complete sequence
          Length = 213246

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 306  tgaggactgacagcatctgac 326
            |||||||||||||||||||||
Sbjct: 9178 tgaggactgacagcatctgac 9158
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>gb|AC137634.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0078C05,
              complete sequence
          Length = 122116

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 208    tttgattcacattcactttgc 228
              |||||||||||||||||||||
Sbjct: 106804 tttgattcacattcactttgc 106784
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>gb|AC137072.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0045E22, from chromosome 3, complete sequence
          Length = 160920

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 208   tttgattcacattcactttgc 228
             |||||||||||||||||||||
Sbjct: 22616 tttgattcacattcactttgc 22596
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 208      tttgattcacattcactttgc 228
                |||||||||||||||||||||
Sbjct: 10159304 tttgattcacattcactttgc 10159284
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>emb|BX119955.10| Mouse DNA sequence from clone RP23-359O12 on chromosome X, complete
             sequence
          Length = 119778

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 49    aaaaaatatacacttaacaattcaaactc 77
             |||||||||||||| || |||||||||||
Sbjct: 91060 aaaaaatatacactgaataattcaaactc 91032
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>gb|AC005411.1|AC005411 Homo sapiens chromosome 17, clone hRPK.721_K_1, complete sequence
          Length = 163908

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 144   caaactaagaaaatgtcagat 164
             |||||||||||||||||||||
Sbjct: 33742 caaactaagaaaatgtcagat 33762
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>gb|AC107762.8| Mus musculus chromosome 1, clone RP23-183L12, complete sequence
          Length = 187760

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 312   ctgacagcatctgactgtgaacac 335
             |||||||| |||||||||||||||
Sbjct: 13467 ctgacagcgtctgactgtgaacac 13490
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>ref|XM_631366.1| Dictyostelium discoideum homeodomain (HOX) containing protein
            (DDB0220490), partial mRNA
          Length = 4092

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 203  tttcttttgattcacattcacttt 226
            |||||||||||||| |||||||||
Sbjct: 3229 tttcttttgattcaaattcacttt 3206
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>gb|AC101738.16| Mus musculus chromosome 1, clone RP23-472N5, complete sequence
          Length = 183026

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 420    gctccatgccatcactgaca 439
              ||||||||||||||||||||
Sbjct: 112473 gctccatgccatcactgaca 112454
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>gb|AC132331.3| Mus musculus BAC clone RP24-217D10 from chromosome 12, complete sequence
          Length = 176940

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 306    tgaggactgacagcatctga 325
              ||||||||||||||||||||
Sbjct: 133051 tgaggactgacagcatctga 133070
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>gb|AC133892.9| Mus musculus chromosome 1, clone RP23-279J5, complete sequence
          Length = 163620

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 322   ctgactgtgaacaccaactg 341
             ||||||||||||||||||||
Sbjct: 69187 ctgactgtgaacaccaactg 69206
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>emb|CR391905.6| Zebrafish DNA sequence from clone DKEY-16P7 in linkage group 9, complete
              sequence
          Length = 221511

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 49     aaaaaatatacacttaacaattcaaact 76
              |||||| ||||||| |||||||||||||
Sbjct: 153704 aaaaaaaatacactaaacaattcaaact 153677
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>gb|AC162299.6| Mus musculus chromosome 1, clone RP24-320H7, complete sequence
          Length = 130226

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 420  gctccatgccatcactgaca 439
            ||||||||||||||||||||
Sbjct: 1875 gctccatgccatcactgaca 1856
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>gb|AC140078.8| Homo sapiens 12 BAC RP13-7D7 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 174598

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 344   gtccttgagaccctggtgtc 363
             ||||||||||||||||||||
Sbjct: 79723 gtccttgagaccctggtgtc 79704
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>emb|AL021684.1|ATF6H11 Arabidopsis thaliana DNA chromosome 5, BAC clone F6H11 (ESSAII project)
          Length = 118086

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 200   tgctttcttttgattcacat 219
             ||||||||||||||||||||
Sbjct: 75199 tgctttcttttgattcacat 75218
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>gb|AC163436.3| Mus musculus chromosome 1, clone RP23-102H12, complete sequence
          Length = 198253

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 312    ctgacagcatctgactgtgaacac 335
              |||||||| |||||||||||||||
Sbjct: 178704 ctgacagcgtctgactgtgaacac 178727
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>gb|AE006465.1| Homo sapiens 16p13.3 sequence section 4 of 8
          Length = 278911

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 201    gctttcttttgattcacatt 220
              ||||||||||||||||||||
Sbjct: 172448 gctttcttttgattcacatt 172429
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>gb|AC006954.8| Arabidopsis thaliana chromosome 2 clone F25P17 map mi238, complete
             sequence
          Length = 93701

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 203   tttcttttgattcacattca 222
             ||||||||||||||||||||
Sbjct: 25321 tttcttttgattcacattca 25302
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>gb|AC013509.5|AC013509 Homo sapiens chromosome , clone RP11-115I9, complete sequence
          Length = 151544

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 144  caaactaagaaaatgtcaga 163
            ||||||||||||||||||||
Sbjct: 5953 caaactaagaaaatgtcaga 5972
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>gb|AC148676.1| Macaca mulatta Major Histocompatibility Complex BAC MMU118H05, complete
             sequence
          Length = 155090

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 37    atcgttcagtccaaaaaata 56
             ||||||||||||||||||||
Sbjct: 65147 atcgttcagtccaaaaaata 65128
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>gb|AC148668.1| Macaca mulatta Major Histocompatibility Complex BAC MMU038L02, complete
              sequence
          Length = 168263

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 37     atcgttcagtccaaaaaata 56
              ||||||||||||||||||||
Sbjct: 104971 atcgttcagtccaaaaaata 104952
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>gb|AC009041.10| Homo sapiens chromosome 16 clone RP11-161M6, complete sequence
          Length = 162342

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 201   gctttcttttgattcacatt 220
             ||||||||||||||||||||
Sbjct: 26807 gctttcttttgattcacatt 26788
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>emb|BX248117.9| Zebrafish DNA sequence from clone CH211-226D5, complete sequence
          Length = 181542

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 51     aaaatatacacttaacaatt 70
              ||||||||||||||||||||
Sbjct: 108569 aaaatatacacttaacaatt 108550
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>gb|AC011716.7|AC011716 Homo sapiens chromosome 8 clone RP11-65D13, complete sequence
          Length = 172327

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 144   caaactaagaaaatgtcaga 163
             ||||||||||||||||||||
Sbjct: 27878 caaactaagaaaatgtcaga 27859
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>dbj|AB010075.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MPA24
          Length = 84440

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 200   tgctttcttttgattcacat 219
             ||||||||||||||||||||
Sbjct: 44608 tgctttcttttgattcacat 44589
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>gb|AC102900.12| Mus musculus chromosome 1, clone RP24-315J13, complete sequence
          Length = 192545

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 312    ctgacagcatctgactgtgaacac 335
              |||||||| |||||||||||||||
Sbjct: 144232 ctgacagcgtctgactgtgaacac 144255
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>gb|AE017143.1| Haemophilus ducreyi strain 35000HP complete genome
          Length = 1698955

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 198     actgctttcttttgattcac 217
               ||||||||||||||||||||
Sbjct: 1408991 actgctttcttttgattcac 1408972
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>emb|Z92845.1|HS443D9 Human DNA sequence from clone LA16c-443D9 on chromosome 16, complete
             sequence
          Length = 34994

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 201   gctttcttttgattcacatt 220
             ||||||||||||||||||||
Sbjct: 15225 gctttcttttgattcacatt 15206


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,822,608
Number of Sequences: 3902068
Number of extensions: 3822608
Number of successful extensions: 76562
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 76403
Number of HSP's gapped (non-prelim): 159
length of query: 442
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 420
effective length of database: 17,147,199,772
effective search space: 7201823904240
effective search space used: 7201823904240
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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