ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl26d02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1NADD_STRR6 (P65505) Probable nicotinate-nucleotide adenylyltrans... 30 2.3
2NADD_STRPN (P65504) Probable nicotinate-nucleotide adenylyltrans... 30 2.3
3KLDC4_HUMAN (Q8TBB5) Kelch domain-containing protein 4 30 2.3
4FTSW_SYNY3 (P74180) Probable cell division protein ftsW 29 3.9
5KLDC4_MOUSE (Q921I2) Kelch domain-containing protein 4 28 5.2
6NUDT7_ARATH (Q9SU14) Nudix hydrolase 7 (EC 3.6.1.-) (AtNUDT7) (A... 28 6.7

>NADD_STRR6 (P65505) Probable nicotinate-nucleotide adenylyltransferase (EC|
           2.7.7.18) (Deamido-NAD(+) pyrophosphorylase)
           (Deamido-NAD(+) diphosphorylase) (Nicotinate
           mononucleotide adenylyltransferase) (NaMN
           adenylyltransferase)
          Length = 209

 Score = 29.6 bits (65), Expect = 2.3
 Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = +2

Query: 11  TKELATPKLKITTMPEVCQKKKKQ-RRAGGNITP 109
           T EL TP  K+   PE+ +KK+KQ    GGN  P
Sbjct: 2   TIELLTPFTKVELEPEIKEKKRKQVGILGGNFNP 35



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>NADD_STRPN (P65504) Probable nicotinate-nucleotide adenylyltransferase (EC|
           2.7.7.18) (Deamido-NAD(+) pyrophosphorylase)
           (Deamido-NAD(+) diphosphorylase) (Nicotinate
           mononucleotide adenylyltransferase) (NaMN
           adenylyltransferase)
          Length = 209

 Score = 29.6 bits (65), Expect = 2.3
 Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = +2

Query: 11  TKELATPKLKITTMPEVCQKKKKQ-RRAGGNITP 109
           T EL TP  K+   PE+ +KK+KQ    GGN  P
Sbjct: 2   TIELLTPFTKVELEPEIKEKKRKQVGILGGNFNP 35



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>KLDC4_HUMAN (Q8TBB5) Kelch domain-containing protein 4|
          Length = 520

 Score = 29.6 bits (65), Expect = 2.3
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +3

Query: 75  KNNGGPEGTSHHRLHYWAKQGIFF 146
           K+ GGP G S HR+  W +Q I F
Sbjct: 169 KSTGGPSGRSGHRMVAWKRQLILF 192



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>FTSW_SYNY3 (P74180) Probable cell division protein ftsW|
          Length = 393

 Score = 28.9 bits (63), Expect = 3.9
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -1

Query: 87  LRCFFFFWQTSGIVVIFSLGVASSFVSS 4
           +R  FF W   G+VV+FS   A S  +S
Sbjct: 29  MRTLFFAWMAMGVVVLFSASYAESLDTS 56



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>KLDC4_MOUSE (Q921I2) Kelch domain-containing protein 4|
          Length = 584

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +3

Query: 75  KNNGGPEGTSHHRLHYWAKQGIFF 146
           ++ GGP G S HR+  W +Q I F
Sbjct: 169 RSTGGPSGRSGHRMVAWKRQLILF 192



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>NUDT7_ARATH (Q9SU14) Nudix hydrolase 7 (EC 3.6.1.-) (AtNUDT7) (ADP-ribose|
           pyrophosphatase) (EC 3.6.1.13) (NADH pyrophosphatase)
           (EC 3.6.1.22)
          Length = 282

 Score = 28.1 bits (61), Expect = 6.7
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +2

Query: 50  MPEVCQKKKKQRRAGGNITPSTSLLGKTRDFFC 148
           M  +CQKK ++   G  I P+T+  GK    +C
Sbjct: 231 MANICQKKCEEEYLGFAIVPTTTSSGKESFIYC 263


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,220,564
Number of Sequences: 219361
Number of extensions: 530113
Number of successful extensions: 1565
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1559
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1565
length of database: 80,573,946
effective HSP length: 35
effective length of database: 72,896,311
effective search space used: 1749511464
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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