Clone Name | rbastl26c11 |
---|---|
Clone Library Name | barley_pub |
>CYPC_BACSU (O31440) Cytochrome P450 152A1 (EC 1.14.-.-) (P450BsBeta) (Fatty| acid beta-hydroxylase) Length = 417 Score = 30.4 bits (67), Expect = 1.1 Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 3/55 (5%) Frame = +1 Query: 91 LTAQVPHAVSSQESNFTLK---CYINNRTLALNKRKITMSTRAQNFICITTLEAS 246 + Q+PH S S LK +I NRT N +NFIC+T EA+ Sbjct: 1 MNEQIPHDKSLDNSLTLLKEGYLFIKNRTERYNSDLFQARLLGKNFICMTGAEAA 55
>CYNT_SYNP7 (P27134) Carbonic anhydrase (EC 4.2.1.1)| Length = 272 Score = 29.3 bits (64), Expect = 2.4 Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 8/82 (9%) Frame = -3 Query: 257 VEVIEASNVVMQMKFWALVDIVIFLLFSARVLLFM*HFKVKFD--------SWDDTA*GT 102 VE++ A NV+ Q++ IV LF ++ +F ++V+ S DDT Sbjct: 147 VEILVAENVLTQIENLKTYPIVRSRLFQGKLQIFGWIYEVESGEVLQISRTSSDDTGIDE 206 Query: 101 CAVRNPGHDIKELADHSWHPYT 36 C VR PG K + P T Sbjct: 207 CPVRLPGSQEKAILGRCVVPLT 228
>S230_PLAFO (P68875) Transmission-blocking target antigen S230 precursor| Length = 3135 Score = 28.5 bits (62), Expect = 4.1 Identities = 15/44 (34%), Positives = 23/44 (52%) Frame = +1 Query: 91 LTAQVPHAVSSQESNFTLKCYINNRTLALNKRKITMSTRAQNFI 222 +T + PH NFT K Y N +L N +KI ++ +NF+ Sbjct: 2486 VTIKCPHT-----KNFTPKDYFPNSSLITNDKKIVITFDKKNFV 2524
>S230_PLAF7 (P68874) Transmission-blocking target antigen S230 precursor| Length = 3135 Score = 28.5 bits (62), Expect = 4.1 Identities = 15/44 (34%), Positives = 23/44 (52%) Frame = +1 Query: 91 LTAQVPHAVSSQESNFTLKCYINNRTLALNKRKITMSTRAQNFI 222 +T + PH NFT K Y N +L N +KI ++ +NF+ Sbjct: 2486 VTIKCPHT-----KNFTPKDYFPNSSLITNDKKIVITFDKKNFV 2524
>DNS2B_MOUSE (Q9QY48) Deoxyribonuclease-2-beta precursor (EC 3.1.22.1)| (Deoxyribonuclease II beta) (DNase II beta) (DNase2-like acid DNase) (DNase II-like acid DNase) (Endonuclease DLAD) Length = 354 Score = 28.1 bits (61), Expect = 5.3 Identities = 9/21 (42%), Positives = 17/21 (80%) Frame = +3 Query: 228 HNIRGLNYLHLSLNSFFSDQI 290 H+ +GLN++H + +SF++D I Sbjct: 223 HSAQGLNFVHFAKSSFYTDDI 243
>CD2_HORSE (P37998) T-cell surface antigen CD2 precursor| Length = 347 Score = 27.7 bits (60), Expect = 6.9 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 4/51 (7%) Frame = +1 Query: 130 SNFTLKCYINNRTLALNKRKITMSTRAQN----FICITTLEASITSTCLLI 270 ++F LK Y+N R + + RK+ + RA N F C S S+ ++I Sbjct: 147 TDFELKLYLNGRMIQKSPRKVIVYKRASNQIASFKCTANNTVSEESSSVVI 197
>RNAS8_MIOTA (Q8SPZ7) Ribonuclease 8 precursor (EC 3.1.27.-) (RNase 8)| Length = 154 Score = 27.3 bits (59), Expect = 9.1 Identities = 11/30 (36%), Positives = 19/30 (63%) Frame = -1 Query: 133 LILGMTLHEVPVQLEILDMTSKNWQITRGI 44 L+LG+ + ++PV + DMTS W T+ + Sbjct: 14 LLLGLRVAQIPVSAKPKDMTSSQWFKTQHV 43 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 50,821,310 Number of Sequences: 219361 Number of extensions: 899187 Number of successful extensions: 1755 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 1749 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1755 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 1380984984 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)