>gb|AY359936.1| Trachelomonas grandis large subunit ribosomal RNA gene, partial
           sequence
          Length = 1448

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 117 agcaactctactcctgagtgc 137
           |||||||||||||||||||||
Sbjct: 306 agcaactctactcctgagtgc 286

>gb|AC102611.10| Mus musculus chromosome 1, clone RP23-416O18, complete sequence
          Length = 210808

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 189    tgtgaagtgtttcacgcattt 209
              |||||||||||||||||||||
Sbjct: 139769 tgtgaagtgtttcacgcattt 139749

>gb|BC054616.1| Danio rerio zgc:64090, mRNA (cDNA clone MGC:64090 IMAGE:6794879),
           complete cds
          Length = 2782

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 308 tctccagcgcacaggaagggagtgg 332
           ||||||||||||||||||| |||||
Sbjct: 375 tctccagcgcacaggaaggaagtgg 399

>gb|AC004848.1| Homo sapiens PAC clone RP4-649P17 from 7, complete sequence
          Length = 135214

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 134   gtgcaataaacataacacctccatc 158
             ||||||||||||||||| |||||||
Sbjct: 64724 gtgcaataaacataacatctccatc 64700

>gb|AC158961.3| Mus musculus chromosome 1, clone RP23-316E20, complete sequence
          Length = 202205

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 189    tgtgaagtgtttcacgcattt 209
              |||||||||||||||||||||
Sbjct: 174586 tgtgaagtgtttcacgcattt 174606

>ref|XM_680916.1| PREDICTED: Danio rerio skip (LOC572810), mRNA
          Length = 567

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 308 tctccagcgcacaggaagggagtgg 332
           ||||||||||||||||||| |||||
Sbjct: 308 tctccagcgcacaggaaggaagtgg 332

>ref|NM_200411.1| Danio rerio zgc:64090 (zgc:64090), mRNA
          Length = 2782

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 308 tctccagcgcacaggaagggagtgg 332
           ||||||||||||||||||| |||||
Sbjct: 375 tctccagcgcacaggaaggaagtgg 399

>gb|AC150773.2| Xenopus tropicalis clone CH216-69F7, complete sequence
          Length = 115925

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 233   gggtgtggccatgaagtggca 253
             |||||||||||||||||||||
Sbjct: 43529 gggtgtggccatgaagtggca 43509

>ref|XM_528664.1| PREDICTED: Pan troglodytes similar to FLJ14466 protein (LOC473293),
           mRNA
          Length = 1242

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 279 cgaggtcaccaggggcatgc 298
           ||||||||||||||||||||
Sbjct: 511 cgaggtcaccaggggcatgc 492

>gb|AC142345.1| Pan troglodytes BAC clone RP43-1K4 from Y, complete sequence
          Length = 213921

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 36    atacaagaaatctggaagaaaata 59
             |||||| |||||||||||||||||
Sbjct: 71634 atacaaaaaatctggaagaaaata 71657

>emb|CT025553.4| Mouse DNA sequence from clone RP23-470O20 on chromosome 14, complete
             sequence
          Length = 173093

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 50    gaagaaaataacaacaaaat 69
             ||||||||||||||||||||
Sbjct: 52691 gaagaaaataacaacaaaat 52710

>gb|AC135780.2| Homo sapiens chromosome 16 clone CTD-2320F3, complete sequence
          Length = 125603

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 49    ggaagaaaataacaacaaaa 68
             ||||||||||||||||||||
Sbjct: 33769 ggaagaaaataacaacaaaa 33788

>gb|AC098690.3| Homo sapiens chromosome 1 clone RP11-507I14, complete sequence
          Length = 128000

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 43  aaatctggaagaaaataaca 62
           ||||||||||||||||||||
Sbjct: 863 aaatctggaagaaaataaca 882

>emb|AL355475.7| Human DNA sequence from clone RP1-241M7 on chromosome 1q43-44, complete
             sequence
          Length = 84707

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 124   ctactcctgagtgcaataaa 143
             ||||||||||||||||||||
Sbjct: 32634 ctactcctgagtgcaataaa 32653

>gb|AC093563.3| Homo sapiens chromosome 1 clone RP4-648I13, complete sequence
          Length = 163579

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 43    aaatctggaagaaaataaca 62
             ||||||||||||||||||||
Sbjct: 54016 aaatctggaagaaaataaca 54035

>dbj|BS000600.1| Pan troglodytes chromosome Y clone:PTB-253H05, complete sequences
          Length = 100704

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 36    atacaagaaatctggaagaaaata 59
             |||||| |||||||||||||||||
Sbjct: 25108 atacaaaaaatctggaagaaaata 25085

>emb|BX537340.15| Zebrafish DNA sequence from clone DKEYP-93A2 in linkage group 7, complete
              sequence
          Length = 192070

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 42     gaaatctggaagaaaataac 61
              ||||||||||||||||||||
Sbjct: 167649 gaaatctggaagaaaataac 167668

>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 36       atacaagaaatctggaagaaaata 59
                |||||| |||||||||||||||||
Sbjct: 15327658 atacaaaaaatctggaagaaaata 15327681

>gb|AC146513.4| Pan troglodytes BAC clone CH251-223P3 from chromosome y, complete
             sequence
          Length = 162679

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 36    atacaagaaatctggaagaaaata 59
             |||||| |||||||||||||||||
Sbjct: 12403 atacaaaaaatctggaagaaaata 12380

>gb|AC019187.3|AC019187 Homo sapiens BAC clone RP11-304J20 from 1, complete sequence
          Length = 174673

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 43    aaatctggaagaaaataaca 62
             ||||||||||||||||||||
Sbjct: 90909 aaatctggaagaaaataaca 90890

>gb|AC140062.11| Homo sapiens 12 BAC RP13-298C8 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 64695

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 279   cgaggtcaccaggggcatgc 298
             ||||||||||||||||||||
Sbjct: 44743 cgaggtcaccaggggcatgc 44724

>gb|AC116667.2| Homo sapiens chromosome 16 clone RP11-346C20, complete sequence
          Length = 156100

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 49    ggaagaaaataacaacaaaa 68
             ||||||||||||||||||||
Sbjct: 77872 ggaagaaaataacaacaaaa 77853

>gb|AC009240.6|AC009240 Homo sapiens BAC clone RP11-489O13 from Y, complete sequence
          Length = 101290

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 36    atacaagaaatctggaagaaaata 59
             |||||| |||||||||||||||||
Sbjct: 98518 atacaaaaaatctggaagaaaata 98495

>gb|AC133798.3| Homo sapiens 12 BAC RP11-552F17 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 20939

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 279  cgaggtcaccaggggcatgc 298
            ||||||||||||||||||||
Sbjct: 1078 cgaggtcaccaggggcatgc 1059

>dbj|AB015474.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MLM24
          Length = 87487

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 51    aagaaaataacaacaaaatc 70
             ||||||||||||||||||||
Sbjct: 39022 aagaaaataacaacaaaatc 39003

>gb|BC091945.1| Danio rerio cDNA clone IMAGE:7148721
          Length = 1590

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 42  gaaatctggaagaaaataac 61
           ||||||||||||||||||||
Sbjct: 470 gaaatctggaagaaaataac 489

>emb|CT010467.6| Mouse DNA sequence from clone RP23-81C12 on chromosome 17, complete
             sequence
          Length = 216559

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 49    ggaagaaaataacaacaaaa 68
             ||||||||||||||||||||
Sbjct: 79397 ggaagaaaataacaacaaaa 79416

>emb|AL732396.11| Mouse DNA sequence from clone RP23-93M14 on chromosome X, complete
              sequence
          Length = 173254

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 51     aagaaaataacaacaaaatc 70
              ||||||||||||||||||||
Sbjct: 163924 aagaaaataacaacaaaatc 163943


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,183,443
Number of Sequences: 3902068
Number of extensions: 3183443
Number of successful extensions: 93563
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 93496
Number of HSP's gapped (non-prelim): 67
length of query: 338
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 316
effective length of database: 17,147,199,772
effective search space: 5418515127952
effective search space used: 5418515127952
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)