>gb|AC103367.11| Mus musculus chromosome 18, clone RP24-127F15, complete sequence
          Length = 169521

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 250   tcagccaatgcaaactaaact 270
             |||||||||||||||||||||
Sbjct: 48757 tcagccaatgcaaactaaact 48737

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                
Query: 239     ccctacatctttcagccaatgcaaactaaactg 271
               |||| ||||||||||||||| ||||| ||||||
Sbjct: 9793704 cccttcatctttcagccaatccaaaccaaactg 9793736

>dbj|AP001072.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0025D05
          Length = 145684

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 239   ccctacatctttcagccaatgcaaactaaactg 271
             |||| ||||||||||||||| ||||| ||||||
Sbjct: 57954 cccttcatctttcagccaatccaaaccaaactg 57986

>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica
          Length = 3633272

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 355     gcctccttcaaacttgcaagt 375
               |||||||||||||||||||||
Sbjct: 2500385 gcctccttcaaacttgcaagt 2500405

>gb|AC102794.8| Mus musculus chromosome 3, clone RP23-235G13, complete sequence
          Length = 166028

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 26     catttccattctaacttttt 45
              ||||||||||||||||||||
Sbjct: 102454 catttccattctaacttttt 102435

>gb|AC107206.4| Oryza sativa chromosome 3 BAC OSJNBa0063J18 genomic sequence, complete
             sequence
          Length = 154558

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 244   catctttcagccaatgcaaactaaactg 271
             ||||||||||||||| ||||| ||||||
Sbjct: 13332 catctttcagccaatccaaaccaaactg 13359



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 77    tccccctaacaacttggggtaacagcaatcac 108
             |||||||||||||| |||| |||||| |||||
Sbjct: 13130 tccccctaacaactcggggaaacagcgatcac 13161

>gb|AC124535.4| Mus musculus BAC clone RP23-331C24 from chromosome 18, complete
             sequence
          Length = 206191

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 18    atttacatcatttccattctaact 41
             ||||||||||| ||||||||||||
Sbjct: 78543 atttacatcatctccattctaact 78566

>gb|AC147069.2| Pan troglodytes BAC clone RP43-165H20 from 7, complete sequence
          Length = 193047

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 68     tgcctgttgtccccctaaca 87
              ||||||||||||||||||||
Sbjct: 179675 tgcctgttgtccccctaaca 179694

>gb|AC165944.3| Mus musculus chromosome 3, clone RP24-134A8, complete sequence
          Length = 175118

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 26    catttccattctaacttttt 45
             ||||||||||||||||||||
Sbjct: 79633 catttccattctaacttttt 79614

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 244      catctttcagccaatgcaaactaaactg 271
                ||||||||||||||| ||||| ||||||
Sbjct: 23176851 catctttcagccaatccaaaccaaactg 23176878



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 77       tccccctaacaacttggggtaacagcaatcac 108
                |||||||||||||| |||| |||||| |||||
Sbjct: 23176649 tccccctaacaactcggggaaacagcgatcac 23176680

>gb|AC165311.3| Mus musculus chromosome 18, clone RP23-352F3, complete sequence
          Length = 174474

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 18     atttacatcatttccattctaact 41
              ||||||||||| ||||||||||||
Sbjct: 107020 atttacatcatctccattctaact 107043

>gb|AC133937.3| Mus musculus BAC clone RP24-486L5 from chromosome 5, complete sequence
          Length = 209392

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 17    catttacatcatttccattc 36
             ||||||||||||||||||||
Sbjct: 29778 catttacatcatttccattc 29759

>gb|AC115743.10| Mus musculus chromosome 5, clone RP23-477P24, complete sequence
          Length = 189890

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 17     catttacatcatttccattc 36
              ||||||||||||||||||||
Sbjct: 132312 catttacatcatttccattc 132331

>emb|CR391914.17| Zebrafish DNA sequence from clone CH211-69O18 in linkage group 16,
             complete sequence
          Length = 170876

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 211   cttttcaccacagcatgcag 230
             ||||||||||||||||||||
Sbjct: 39586 cttttcaccacagcatgcag 39567

>ref|XM_449846.1| Candida glabrata CBS138 hypothetical protein (CAGL0M11616g) partial
           mRNA
          Length = 14643

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 40  ctttttaaccaatgaattaagcaa 63
           |||||||| |||||||||||||||
Sbjct: 972 ctttttaatcaatgaattaagcaa 995

>gb|AC130467.2| Homo sapiens chromosome 16 clone CTD-2015G9, complete sequence
          Length = 117601

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 12    atggccatttacatcatttccatt 35
             ||||||||||||| ||||||||||
Sbjct: 67091 atggccatttacaacatttccatt 67068

>emb|CR380959.1| Candida glabrata strain CBS138 chromosome M complete sequence
          Length = 1400893

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 40      ctttttaaccaatgaattaagcaa 63
               |||||||| |||||||||||||||
Sbjct: 1155212 ctttttaatcaatgaattaagcaa 1155189

>gb|AC083868.3| Homo sapiens chromosome 7 clone RP11-148L5, complete sequence
          Length = 183541

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 68     tgcctgttgtccccctaaca 87
              ||||||||||||||||||||
Sbjct: 106819 tgcctgttgtccccctaaca 106800

>emb|BX649540.7| Zebrafish DNA sequence from clone CH211-229O8 in linkage group 3,
             complete sequence
          Length = 120836

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 206   aactgcttttcaccacagcatgca 229
             ||||||||||||||||| ||||||
Sbjct: 78668 aactgcttttcaccacaccatgca 78691

>gb|AC124554.5| Mus musculus BAC clone RP23-245F10 from chromosome 3, complete sequence
          Length = 191481

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 12    atggccatttacatcatttc 31
             ||||||||||||||||||||
Sbjct: 83887 atggccatttacatcatttc 83906

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 244      catctttcagccaatgcaaactaaactg 271
                ||||||||||||||| ||||| ||||||
Sbjct: 23169879 catctttcagccaatccaaaccaaactg 23169906



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 77       tccccctaacaacttggggtaacagcaatcac 108
                |||||||||||||| |||| |||||| |||||
Sbjct: 23169677 tccccctaacaactcggggaaacagcgatcac 23169708

>gb|AC009154.5| Homo sapiens chromosome 16 clone RP11-58A18, complete sequence
          Length = 181914

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 12     atggccatttacatcatttccatt 35
              ||||||||||||| ||||||||||
Sbjct: 134054 atggccatttacaacatttccatt 134077

>gb|AC009315.5| Homo sapiens BAC clone RP11-466K9 from 2, complete sequence
          Length = 143794

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 25     tcatttccattctaactttttaac 48
              ||||||||||||||| ||||||||
Sbjct: 102585 tcatttccattctaattttttaac 102562

>emb|BX571854.11| Zebrafish DNA sequence from clone CH211-195O19 in linkage group 20,
              complete sequence
          Length = 194209

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 245    atctttcagccaatgcaaac 264
              ||||||||||||||||||||
Sbjct: 148255 atctttcagccaatgcaaac 148274

>gb|AC117576.11| Mus musculus chromosome 1, clone RP23-34E15, complete sequence
          Length = 200174

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 50    aatgaattaagcaagtgatg 69
             ||||||||||||||||||||
Sbjct: 42188 aatgaattaagcaagtgatg 42169

>emb|CR925805.14| Zebrafish DNA sequence from clone DKEY-99N20 in linkage group 16,
              complete sequence
          Length = 180576

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 211    cttttcaccacagcatgcag 230
              ||||||||||||||||||||
Sbjct: 151549 cttttcaccacagcatgcag 151530

>gb|AE016830.1| Enterococcus faecalis V583, complete genome
          Length = 3218031

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 246     tctttcagccaatgcaaact 265
               ||||||||||||||||||||
Sbjct: 2824114 tctttcagccaatgcaaact 2824133

>gb|AC159900.3| Mus musculus BAC clone RP23-48H10 from chromosome 9, complete sequence
          Length = 194510

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 17    catttacatcatttccattctaac 40
             |||||||||||| |||||||||||
Sbjct: 96687 catttacatcatgtccattctaac 96664

>emb|AL772387.13| Mouse DNA sequence from clone RP23-133B16 on chromosome 2, complete
             sequence
          Length = 195412

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 18    atttacatcatttccattct 37
             ||||||||||||||||||||
Sbjct: 44655 atttacatcatttccattct 44636


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,220,430
Number of Sequences: 3902068
Number of extensions: 3220430
Number of successful extensions: 56806
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 56666
Number of HSP's gapped (non-prelim): 140
length of query: 416
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 394
effective length of database: 17,147,199,772
effective search space: 6755996710168
effective search space used: 6755996710168
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)