>GAT5B_XENLA (P43696) GATA-binding factor 5-B (Transcription factor xGATA-5B)|
          Length = 388

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = -1

Query: 385 ESHMEKTKAPMTPNVLSLGKKPPVGEGAAGKGG 287
           ESH     +P TP+  S    PPVG  +A  GG
Sbjct: 73  ESHAFNASSPHTPSGFSYSHSPPVGNSSARDGG 105

>GAT5A_XENLA (P43695) GATA-binding factor 5-A (Transcription factor xGATA-5A)|
          Length = 390

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = -1

Query: 385 ESHMEKTKAPMTPNVLSLGKKPPVGEGAAGKGG 287
           ESH     +P TP   S    PPVG  +A  GG
Sbjct: 72  ESHAFNASSPHTPTGFSYSHSPPVGNSSARDGG 104

>FHAB_BORPE (P12255) Filamentous hemagglutinin|
          Length = 3590

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = +3

Query: 45   ITAAMAVQYFQDYLQFSLTANTN*CSHSKGDWKNRNTVERMHHLLD 182
            +    A++YF+  L  SLTA  N    S   W  ++T E + +LLD
Sbjct: 1907 VRTVSAMEYFKTPLPVSLTALDNRAGLSPATWNFQSTYELLDYLLD 1952

>REPS1_MOUSE (O54916) RalBP1-associated Eps domain-containing protein 1|
           (RalBP1-interacting protein 1)
          Length = 743

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 18/63 (28%), Positives = 28/63 (44%)
 Frame = -2

Query: 312 VKEQPAKAGQGGGPTSRVKTKTRQELAGTWRATLPLLPEGDQDYPEDDASSQLYSGFSSL 133
           V EQP + G  G P     +K+            P +P  +Q +PE + SS+ +  FS  
Sbjct: 328 VGEQPGEVGYSGSPAEAPPSKS------------PSMPSLNQTWPELNQSSEQWETFSER 375

Query: 132 PSN 124
            S+
Sbjct: 376 SSS 378

>FOG_DROME (P40795) Protein folded gastrulation precursor [Contains: Protein|
           folded gastrulation; G protein-coupled receptor ligand]
          Length = 730

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 22/64 (34%), Positives = 31/64 (48%)
 Frame = -2

Query: 273 PTSRVKTKTRQELAGTWRATLPLLPEGDQDYPEDDASSQLYSGFSSLPSNVNINLCWP*V 94
           PT  VK +    LAG    + P  P GD DY +D+ S ++    S +P+ +   L  P V
Sbjct: 90  PTDLVKQELI--LAGGSNGSPPPPPIGDYDYGDDEESEEIVYDLSVIPTAMQDGLP-PSV 146

Query: 93  RIGD 82
             GD
Sbjct: 147 GTGD 150

>AKA12_HUMAN (Q02952) A-kinase anchor protein 12 (A-kinase anchor protein 250|
           kDa) (AKAP 250) (Myasthenia gravis autoantigen gravin)
          Length = 1781

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 18/45 (40%), Positives = 24/45 (53%)
 Frame = -1

Query: 424 GQTKVSDSAGFRRESHMEKTKAPMTPNVLSLGKKPPVGEGAAGKG 290
           G  KV    GF+     +KT+ P T  +L++  K   GEGAAG G
Sbjct: 170 GFKKVFKFVGFKFTVKKDKTEKPDTVQLLTV--KKDEGEGAAGAG 212

>K1043_HUMAN (Q96AY4) TPR repeat-containing protein KIAA1043|
          Length = 1716

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 18/55 (32%), Positives = 25/55 (45%)
 Frame = -2

Query: 303  QPAKAGQGGGPTSRVKTKTRQELAGTWRATLPLLPEGDQDYPEDDASSQLYSGFS 139
            +P    +GGGP  R +   R + A   R+TLP      Q  P  +   + Y GFS
Sbjct: 1242 KPEGGSEGGGPGGR-QDHDRSKNAYLQRSTLPRSQLPPQTRPAGNKDEEEYEGFS 1295

>POL2_RRVS (P36324) RNA2 polyprotein (P2) [Contains: P2A protein (2A);|
           Movement protein (2B-MP); Coat protein (2C-CP)]
          Length = 1107

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +2

Query: 50  CGHGGAIFPRLSPILTHGQHKLMFTFE 130
           C     +FP LS +  H QH L+ +FE
Sbjct: 30  CALSSPLFPELSKLDAHSQHHLLASFE 56

>5S_PROFR (Q70AC7) Methylmalonyl-CoA carboxyltransferase 5S subunit (EC|
           2.1.3.1) (Transcarboxylase 5S subunit)
          Length = 505

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +1

Query: 67  NISKIISNSHSRPTQINVHIRRETGKTGIQLRGCI 171
           +I K I +++ + TQIN+H    TG T + L   I
Sbjct: 197 DIIKAIKDTYGQKTQINLHCHSTTGVTEVSLMKAI 231


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,086,298
Number of Sequences: 219361
Number of extensions: 1095866
Number of successful extensions: 3378
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3246
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3377
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2278320915
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)