ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl26b12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|L37358.1|BLYLOXC Hordeum vulgare lipoxygenase 2 (LoxC) mRNA, ... 256 4e-65
2gb|BT009097.1| Triticum aestivum clone wkm2c.pk005.n2:fis, full ... 103 3e-19
3gb|L37359.1|BLYLOXB Hordeum vulgare lipoxygenase (LoxB) mRNA, co... 62 1e-06
4ref|XM_469412.1| Oryza sativa (japonica cultivar-group), mRNA 60 5e-06
5ref|XM_469411.1| Oryza sativa (japonica cultivar-group), mRNA 60 5e-06
6gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosom... 60 5e-06
7gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 60 5e-06
8emb|X64396.1|OSLRNA O.sativa mRNA for lipoxygenase L-2 60 5e-06
9gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genom... 60 5e-06
10gb|DQ389164.1| Oryza sativa (japonica cultivar-group) dual posit... 60 5e-06
11dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 60 5e-06
12dbj|AK105792.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 5e-06
13dbj|AK072869.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 5e-06
14dbj|AK073529.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 5e-06
15dbj|AK072689.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 5e-06
16dbj|AK071121.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 5e-06
17gb|BT008992.1| Triticum aestivum clone wdk2c.pk011.j13:fis, full... 56 7e-05
18ref|XM_469655.1| Oryza sativa (japonica cultivar-group), mRNA 54 3e-04
19gb|L35931.1|BLYLOXA Barley lipoxygenase 1 (LoxA) gene, complete cds 54 3e-04
20gb|AY220737.1| Hordeum vulgare lipoxygenase 1 protein (LOXA) mRN... 52 0.001
21gb|U32428.1|TAU32428 Triticum aestivum lipoxygenase mRNA, partia... 48 0.018
22ref|XM_483279.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.070
23gb|AC137004.2| Oryza sativa (japonica cultivar-group) chromosome... 46 0.070
24dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.070
25dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.070
26dbj|AP005816.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.070
27dbj|AP006049.2| Oryza sativa (japonica cultivar-group) genomic D... 46 0.070
28dbj|AK066825.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.070
29gb|AF095896.1|AF095896 Oryza sativa lipoxygenase (CM-LOX2) mRNA,... 46 0.070
30gb|AF095895.1|AF095895 Oryza sativa lipoxygenase (CM-LOX1) mRNA,... 46 0.070
31dbj|D14000.1|RICL2OP Oryza sativa (japonica cultivar-group) lox2... 46 0.070
32ref|XM_464447.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.28
33dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.28
34dbj|AP004184.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.28
35dbj|AK071915.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.28
36dbj|AK061610.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.28
37gb|AY111869.1| Zea mays CL452_-8 mRNA sequence 44 0.28
38gb|AY103567.1| Zea mays PCO116252 mRNA sequence 42 1.1
39ref|XM_469401.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.3
40gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genom... 40 4.3
41dbj|AB099850.1| Oryza sativa (japonica cultivar-group) r9-LOX1 m... 40 4.3
42dbj|AK103565.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.3
43gb|AY110522.1| Zea mays CL4677_2 mRNA sequence 40 4.3
44gb|AY104322.1| Zea mays PCO093659 mRNA sequence 40 4.3 
>gb|L37358.1|BLYLOXC Hordeum vulgare lipoxygenase 2 (LoxC) mRNA, complete cds
          Length = 2910

 Score =  256 bits (129), Expect = 4e-65
 Identities = 138/141 (97%)
 Strand = Plus / Minus

                                                                        
Query: 188  agctagctccggtgtaagcaagcaaggatagcacaaaagcatgaggtctcgacgacggac 247
            ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 2727 agctagctccggtgtaagcaagcaaggatagcacaaaggcatgaggtctccacgacggac 2668

                                                                        
Query: 248  gtgctcagatcagatggatatgctgttcgggatgcccctggcggtgagcccctcggccgg 307
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 2667 gtgctcagatcagatggatatgctgttcgggatgcccctggcggtgagcccctcggcctg 2608

                                 
Query: 308  tcccgtgtggtcggaggtgtt 328
            |||||||||||||||||||||
Sbjct: 2607 tcccgtgtggtcggaggtgtt 2587



 Score =  220 bits (111), Expect = 2e-54
 Identities = 143/154 (92%), Gaps = 5/154 (3%)
 Strand = Plus / Minus

                                                                        
Query: 22   ttcattattgggcaaaacaagggannnnnnnctgcacacgacgatgcattgaccggtagc 81
            ||||||||||||||||||||||||       |||||||||||||||||||||||||||||
Sbjct: 2896 ttcattattgggcaaaacaagggatttttt-ctgcacacgacgatgcattgaccggtagc 2838

                                                                        
Query: 82   cagctgagctgagcttccgcatgccgatcagacccgtcgtgcacgcaccc----ttattg 137
            ||||||||||||||||||||||||||||||||||||||||||||||||||    ||||||
Sbjct: 2837 cagctgagctgagcttccgcatgccgatcagacccgtcgtgcacgcacccttatttattg 2778

                                              
Query: 138  ccttaattattcatgcaccggcacaactctctgt 171
            ||||||||||||||||||||||||||||||||||
Sbjct: 2777 ccttaattattcatgcaccggcacaactctctgt 2744
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>gb|BT009097.1| Triticum aestivum clone wkm2c.pk005.n2:fis, full insert mRNA
           sequence
          Length = 1129

 Score =  103 bits (52), Expect = 3e-19
 Identities = 67/72 (93%)
 Strand = Plus / Minus

                                                                       
Query: 257 tcagatggatatgctgttcgggatgcccctggcggtgagcccctcggccggtcccgtgtg 316
           ||||||||| |||||||| |||||||||||||| ||||||||||||||| | ||||||||
Sbjct: 906 tcagatggagatgctgttggggatgcccctggccgtgagcccctcggcctggcccgtgtg 847

                       
Query: 317 gtcggaggtgtt 328
           ||||||||||||
Sbjct: 846 gtcggaggtgtt 835



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 42/46 (91%), Gaps = 1/46 (2%)
 Strand = Plus / Minus

                                                          
Query: 98   ccgcatgccgatcagacccgtcgtgcacgcac-ccttattgcctta 142
            ||||||||||||| |||||||||||||| ||| | |||||||||||
Sbjct: 1045 ccgcatgccgatcggacccgtcgtgcacacacgcattattgcctta 1000
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>gb|L37359.1|BLYLOXB Hordeum vulgare lipoxygenase (LoxB) mRNA, complete cds
          Length = 3003

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                               
Query: 249  tgctcagatcagatggatatgctgttcgggatgcccctggcggtgagcccc 299
            ||||||| ||||||||| | |||||| ||||||||| ||||||||||||||
Sbjct: 2772 tgctcagctcagatggagacgctgttggggatgcccatggcggtgagcccc 2722
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>ref|XM_469412.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2686

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                      
Query: 257  tcagatggatatgctgttcgggatgcccctggcggtgagccc 298
            ||||||||| |||||||| ||||||||| |||||||||||||
Sbjct: 2446 tcagatggagatgctgttggggatgcccatggcggtgagccc 2405
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>ref|XM_469411.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3165

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                      
Query: 257  tcagatggatatgctgttcgggatgcccctggcggtgagccc 298
            ||||||||| |||||||| ||||||||| |||||||||||||
Sbjct: 2925 tcagatggagatgctgttggggatgcccatggcggtgagccc 2884
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>gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0024B16
             map S2606, complete sequence
          Length = 124140

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                       
Query: 257   tcagatggatatgctgttcgggatgcccctggcggtgagccc 298
             ||||||||| |||||||| ||||||||| |||||||||||||
Sbjct: 65816 tcagatggagatgctgttggggatgcccatggcggtgagccc 65775



 Score = 40.1 bits (20), Expect = 4.3
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                    
Query: 267  atgctgttcgggatgcccctggcggtgagcccctcggccg 306
            ||||| || |||||||||||||| |||| |||||| ||||
Sbjct: 6177 atgctattggggatgcccctggcagtgatcccctcagccg 6138
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                      
Query: 254      agatcagatggatatgctgttcgggatgcccctggcgg 291
                |||||||||||| |||||||| ||||||||||||||||
Sbjct: 30026452 agatcagatggagatgctgttggggatgcccctggcgg 30026415



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                          
Query: 257      tcagatggatatgctgttcgggatgcccctggcggtgagccc 298
                ||||||||| |||||||| ||||||||| |||||||||||||
Sbjct: 27821686 tcagatggagatgctgttggggatgcccatggcggtgagccc 27821645



 Score = 40.1 bits (20), Expect = 4.3
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                        
Query: 267      atgctgttcgggatgcccctggcggtgagcccctcggccg 306
                ||||| || |||||||||||||| |||| |||||| ||||
Sbjct: 27762048 atgctattggggatgcccctggcagtgatcccctcagccg 27762009
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>emb|X64396.1|OSLRNA O.sativa mRNA for lipoxygenase L-2
          Length = 2830

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                  
Query: 254  agatcagatggatatgctgttcgggatgcccctggcgg 291
            |||||||||||| |||||||| ||||||||||||||||
Sbjct: 2698 agatcagatggagatgctgttggggatgcccctggcgg 2661
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>gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genomic sequence, complete
             sequence
          Length = 155106

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                   
Query: 254   agatcagatggatatgctgttcgggatgcccctggcgg 291
             |||||||||||| |||||||| ||||||||||||||||
Sbjct: 81299 agatcagatggagatgctgttggggatgcccctggcgg 81336
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>gb|DQ389164.1| Oryza sativa (japonica cultivar-group) dual positional specificity
            lipoxygenase mRNA, complete cds
          Length = 3154

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                      
Query: 257  tcagatggatatgctgttcgggatgcccctggcggtgagccc 298
            ||||||||| |||||||| ||||||||| |||||||||||||
Sbjct: 2919 tcagatggagatgctgttggggatgcccatggcggtgagccc 2878
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                      
Query: 254      agatcagatggatatgctgttcgggatgcccctggcgg 291
                |||||||||||| |||||||| ||||||||||||||||
Sbjct: 30117874 agatcagatggagatgctgttggggatgcccctggcgg 30117837



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                          
Query: 257      tcagatggatatgctgttcgggatgcccctggcggtgagccc 298
                ||||||||| |||||||| ||||||||| |||||||||||||
Sbjct: 27913010 tcagatggagatgctgttggggatgcccatggcggtgagccc 27912969



 Score = 40.1 bits (20), Expect = 4.3
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                        
Query: 267      atgctgttcgggatgcccctggcggtgagcccctcggccg 306
                ||||| || |||||||||||||| |||| |||||| ||||
Sbjct: 27853371 atgctattggggatgcccctggcagtgatcccctcagccg 27853332
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>dbj|AK105792.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-H08, full
            insert sequence
          Length = 1560

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                      
Query: 257  tcagatggatatgctgttcgggatgcccctggcggtgagccc 298
            ||||||||| |||||||| ||||||||| |||||||||||||
Sbjct: 1332 tcagatggagatgctgttggggatgcccatggcggtgagccc 1291
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>dbj|AK072869.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143O17, full
            insert sequence
          Length = 2851

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                      
Query: 257  tcagatggatatgctgttcgggatgcccctggcggtgagccc 298
            ||||||||| |||||||| ||||||||| |||||||||||||
Sbjct: 2597 tcagatggagatgctgttggggatgcccatggcggtgagccc 2556
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>dbj|AK073529.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046E17, full
            insert sequence
          Length = 2928

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                  
Query: 254  agatcagatggatatgctgttcgggatgcccctggcgg 291
            |||||||||||| |||||||| ||||||||||||||||
Sbjct: 2731 agatcagatggagatgctgttggggatgcccctggcgg 2694
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>dbj|AK072689.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143H13, full
            insert sequence
          Length = 3167

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                      
Query: 257  tcagatggatatgctgttcgggatgcccctggcggtgagccc 298
            ||||||||| |||||||| ||||||||| |||||||||||||
Sbjct: 2927 tcagatggagatgctgttggggatgcccatggcggtgagccc 2886
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>dbj|AK071121.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079P11, full
            insert sequence
          Length = 1726

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                      
Query: 257  tcagatggatatgctgttcgggatgcccctggcggtgagccc 298
            ||||||||| |||||||| ||||||||| |||||||||||||
Sbjct: 1497 tcagatggagatgctgttggggatgcccatggcggtgagccc 1456
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>gb|BT008992.1| Triticum aestivum clone wdk2c.pk011.j13:fis, full insert mRNA
           sequence
          Length = 1020

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 61/72 (84%)
 Strand = Plus / Minus

                                                                       
Query: 257 tcagatggatatgctgttcgggatgcccctggcggtgagcccctcggccggtcccgtgtg 316
           ||||||||| |||||||| ||||||||| | |||||||||||  |||| |  ||| ||||
Sbjct: 753 tcagatggagatgctgttggggatgcccttagcggtgagcccggcggcggcgcccttgtg 694

                       
Query: 317 gtcggaggtgtt 328
            |||||||||||
Sbjct: 693 atcggaggtgtt 682
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>ref|XM_469655.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2613

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                               
Query: 257  tcagatggatatgctgttcgggatgcccctggcgg 291
            ||||||||| |||||||| ||||||||||||||||
Sbjct: 2613 tcagatggagatgctgttggggatgcccctggcgg 2579
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>gb|L35931.1|BLYLOXA Barley lipoxygenase 1 (LoxA) gene, complete cds
          Length = 2818

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 63/75 (84%)
 Strand = Plus / Minus

                                                                        
Query: 254  agatcagatggatatgctgttcgggatgcccctggcggtgagcccctcggccggtcccgt 313
            |||| ||||||| |||||||| ||||||||| ||||||| |||||  | || |  ||| |
Sbjct: 2660 agattagatggagatgctgttggggatgcccttggcggtaagcccggcagcggcgccctt 2601

                           
Query: 314  gtggtcggaggtgtt 328
            |||||||||||||||
Sbjct: 2600 gtggtcggaggtgtt 2586
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>gb|AY220737.1| Hordeum vulgare lipoxygenase 1 protein (LOXA) mRNA, partial cds
          Length = 1331

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                        
Query: 259  agatggatatgctgttcgggatgcccctggcggtgagcccctcggccggtcccgtgtggt 318
            ||||||| |||||||| ||||||||| ||||||| |||||  | || |  ||| ||||||
Sbjct: 1084 agatggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggt 1025

                      
Query: 319  cggaggtgtt 328
            ||||||||||
Sbjct: 1024 cggaggtgtt 1015
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>gb|U32428.1|TAU32428 Triticum aestivum lipoxygenase mRNA, partial cds
          Length = 1814

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                    
Query: 255  gatcagatggatatgctgttcgggatgcccctggcggtga 294
            ||||||||||| |||||||| ||||||||| |||| ||||
Sbjct: 1558 gatcagatggagatgctgttggggatgcccttggctgtga 1519
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>ref|XM_483279.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3198

 Score = 46.1 bits (23), Expect = 0.070
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                   
Query: 256  atcagatggatatgctgttcgggatgcccctggcggtga 294
            ||||||||||| ||||||| ||||||||| || ||||||
Sbjct: 2978 atcagatggatgtgctgttggggatgcccatgccggtga 2940
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>gb|AC137004.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0615D12,
              complete sequence
          Length = 155402

 Score = 46.1 bits (23), Expect = 0.070
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 130    ccttattgccttaattattcatg 152
              |||||||||||||||||||||||
Sbjct: 136193 ccttattgccttaattattcatg 136215



 Score = 46.1 bits (23), Expect = 0.070
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 130   ccttattgccttaattattcatg 152
             |||||||||||||||||||||||
Sbjct: 94214 ccttattgccttaattattcatg 94236
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 46.1 bits (23), Expect = 0.070
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                       
Query: 256      atcagatggatatgctgttcgggatgcccctggcggtga 294
                ||||||||||| ||||||| ||||||||| || ||||||
Sbjct: 25242576 atcagatggatgtgctgttggggatgcccatgccggtga 25242538



 Score = 46.1 bits (23), Expect = 0.070
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                       
Query: 256      atcagatggatatgctgttcgggatgcccctggcggtga 294
                ||||||||||| ||||||| ||||||||| || ||||||
Sbjct: 25209453 atcagatggatgtgctgttggggatgcccatgccggtga 25209491
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 46.1 bits (23), Expect = 0.070
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 130      ccttattgccttaattattcatg 152
                |||||||||||||||||||||||
Sbjct: 21745017 ccttattgccttaattattcatg 21745039



 Score = 46.1 bits (23), Expect = 0.070
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 130      ccttattgccttaattattcatg 152
                |||||||||||||||||||||||
Sbjct: 21703038 ccttattgccttaattattcatg 21703060
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>dbj|AP005816.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:B1168A08
          Length = 138135

 Score = 46.1 bits (23), Expect = 0.070
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                     
Query: 256    atcagatggatatgctgttcgggatgcccctggcggtga 294
              ||||||||||| ||||||| ||||||||| || ||||||
Sbjct: 107699 atcagatggatgtgctgttggggatgcccatgccggtga 107661



 Score = 46.1 bits (23), Expect = 0.070
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                    
Query: 256   atcagatggatatgctgttcgggatgcccctggcggtga 294
             ||||||||||| ||||||| ||||||||| || ||||||
Sbjct: 74576 atcagatggatgtgctgttggggatgcccatgccggtga 74614
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>dbj|AP006049.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0016N23
          Length = 147336

 Score = 46.1 bits (23), Expect = 0.070
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                    
Query: 256   atcagatggatatgctgttcgggatgcccctggcggtga 294
             ||||||||||| ||||||| ||||||||| || ||||||
Sbjct: 17761 atcagatggatgtgctgttggggatgcccatgccggtga 17723
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>dbj|AK066825.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075A10, full
            insert sequence
          Length = 3196

 Score = 46.1 bits (23), Expect = 0.070
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                   
Query: 256  atcagatggatatgctgttcgggatgcccctggcggtga 294
            ||||||||||| ||||||| ||||||||| || ||||||
Sbjct: 2976 atcagatggatgtgctgttggggatgcccatgccggtga 2938
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>gb|AF095896.1|AF095896 Oryza sativa lipoxygenase (CM-LOX2) mRNA, partial cds
          Length = 2232

 Score = 46.1 bits (23), Expect = 0.070
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                   
Query: 256  atcagatggatatgctgttcgggatgcccctggcggtga 294
            ||||||||||| ||||||| ||||||||| || ||||||
Sbjct: 2053 atcagatggatgtgctgttggggatgcccatgccggtga 2015
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>gb|AF095895.1|AF095895 Oryza sativa lipoxygenase (CM-LOX1) mRNA, partial cds
          Length = 2664

 Score = 46.1 bits (23), Expect = 0.070
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                   
Query: 256  atcagatggatatgctgttcgggatgcccctggcggtga 294
            ||||||||||| ||||||| ||||||||| || ||||||
Sbjct: 2461 atcagatggatgtgctgttggggatgcccatgccggtga 2423
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>dbj|D14000.1|RICL2OP Oryza sativa (japonica cultivar-group) lox2osPil mRNA for
            lipoxygenase, complete cds
          Length = 3007

 Score = 46.1 bits (23), Expect = 0.070
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                   
Query: 256  atcagatggatatgctgttcgggatgcccctggcggtga 294
            ||||||||||| ||||||| ||||||||| || ||||||
Sbjct: 2891 atcagatggatgtgctgttggggatgcccatgccggtga 2853
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>ref|XM_464447.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3123

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 257  tcagatggatatgctgttcgggatgcccct 286
            ||||||||| |||||||| |||||||||||
Sbjct: 2881 tcagatggagatgctgtttgggatgcccct 2852
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                             
Query: 257     tcagatggatatgctgttcgggatgcccct 286
               ||||||||| |||||||| |||||||||||
Sbjct: 5276963 tcagatggagatgctgtttgggatgcccct 5276992
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>dbj|AP004184.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1225_F07
          Length = 142772

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 257  tcagatggatatgctgttcgggatgcccct 286
            ||||||||| |||||||| |||||||||||
Sbjct: 3266 tcagatggagatgctgtttgggatgcccct 3295
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>dbj|AK071915.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074B03, full
            insert sequence
          Length = 3160

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 257  tcagatggatatgctgttcgggatgcccct 286
            ||||||||| |||||||| |||||||||||
Sbjct: 2880 tcagatggagatgctgtttgggatgcccct 2851
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>dbj|AK061610.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-B01, full
            insert sequence
          Length = 2250

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 257  tcagatggatatgctgttcgggatgcccct 286
            ||||||||| |||||||| |||||||||||
Sbjct: 2042 tcagatggagatgctgtttgggatgcccct 2013
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>gb|AY111869.1| Zea mays CL452_-8 mRNA sequence
          Length = 568

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                     
Query: 261 atggatatgctgttcgggatgcccctggcggtgagcccctcg 302
           ||||| |||||||| || |||||| |||| ||||||||||||
Sbjct: 363 atggagatgctgttgggaatgcccatggcagtgagcccctcg 322
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>gb|AY103567.1| Zea mays PCO116252 mRNA sequence
          Length = 3135

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 261  atggatatgctgttcgggatgcccctggcggtgagcccctcggcc 305
            ||||| |||||||| || |||||| |||| || ||||||||||||
Sbjct: 2896 atggagatgctgttgggaatgcccatggcagtaagcccctcggcc 2852
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>ref|XM_469401.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2726

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                    
Query: 267  atgctgttcgggatgcccctggcggtgagcccctcggccg 306
            ||||| || |||||||||||||| |||| |||||| ||||
Sbjct: 2582 atgctattggggatgcccctggcagtgatcccctcagccg 2543
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>gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genomic sequence, complete
             sequence
          Length = 119329

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                     
Query: 267   atgctgttcgggatgcccctggcggtgagcccctcggccg 306
             ||||| || |||||||||||||| |||| |||||| ||||
Sbjct: 51846 atgctattggggatgcccctggcagtgatcccctcagccg 51885
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>dbj|AB099850.1| Oryza sativa (japonica cultivar-group) r9-LOX1 mRNA for
            9-lipoxigenase, complete cds
          Length = 2988

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                    
Query: 267  atgctgttcgggatgcccctggcggtgagcccctcggccg 306
            ||||| || |||||||||||||| |||| |||||| ||||
Sbjct: 2648 atgctattggggatgcccctggcagtgatcccctcagccg 2609
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>dbj|AK103565.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132L12, full
            insert sequence
          Length = 2830

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                    
Query: 267  atgctgttcgggatgcccctggcggtgagcccctcggccg 306
            ||||| || |||||||||||||| |||| |||||| ||||
Sbjct: 2656 atgctattggggatgcccctggcagtgatcccctcagccg 2617
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>gb|AY110522.1| Zea mays CL4677_2 mRNA sequence
          Length = 1304

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 255 gatcagatggatatgctgttcgggatgcccct 286
           ||||||||||| |||||| | |||||||||||
Sbjct: 132 gatcagatggagatgctgctggggatgcccct 163
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>gb|AY104322.1| Zea mays PCO093659 mRNA sequence
          Length = 1439

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 255  gatcagatggatatgctgttcgggatgcccct 286
            ||||||||||| |||||| | |||||||||||
Sbjct: 1216 gatcagatggagatgctgctggggatgcccct 1185


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,654,385
Number of Sequences: 3902068
Number of extensions: 1654385
Number of successful extensions: 65592
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 65455
Number of HSP's gapped (non-prelim): 138
length of query: 328
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 306
effective length of database: 17,147,199,772
effective search space: 5247043130232
effective search space used: 5247043130232
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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