>THYG_RAT (P06882) Thyroglobulin precursor|
          Length = 2768

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = +3

Query: 177  RTPTPPQIKLLCHYVDVTIP 236
            RTPTPPQI   C Y++V +P
Sbjct: 2271 RTPTPPQISEDCLYLNVFVP 2290

>THYG_MOUSE (O08710) Thyroglobulin precursor|
          Length = 2766

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = +3

Query: 177  RTPTPPQIKLLCHYVDVTIP 236
            RTPTPPQI   C Y++V +P
Sbjct: 2269 RTPTPPQINEDCLYLNVFVP 2288

>HRG_HUMAN (P04196) Histidine-rich glycoprotein precursor|
           (Histidine-proline-rich glycoprotein) (HPRG)
          Length = 525

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 17/67 (25%), Positives = 25/67 (37%), Gaps = 7/67 (10%)
 Frame = +2

Query: 116 HQKNLSSPHSRCYYFYCTHSTNPHPTTNKITLPLCGRDNPYG-------PKNNHPRGSKL 274
           H  N S  H   ++ +  H    HP  +        R +P+G       P  +HP G   
Sbjct: 342 HNNNSSDLHPHKHHSHEQHPHGHHPHAHHPHEHDTHRQHPHGHHPHGHHPHGHHPHGHHP 401

Query: 275 QGENSHC 295
            G + HC
Sbjct: 402 HGHHPHC 408

>DLLA_BRARE (Q6DI48) Delta-like protein A precursor (DeltaA protein)|
          Length = 772

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 15/46 (32%), Positives = 22/46 (47%)
 Frame = +2

Query: 113 YHQKNLSSPHSRCYYFYCTHSTNPHPTTNKITLPLCGRDNPYGPKN 250
           Y  +N SSP SRC +  C +    H   N+    +C   + YG +N
Sbjct: 475 YTGRNCSSPVSRCQHNPCHNGATCHERNNRY---VCACVSGYGGRN 517

>RIM15_YEAST (P43565) Serine/threonine-protein kinase RIM15 (EC 2.7.11.1)|
          Length = 1770

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
 Frame = +2

Query: 101  INQQYHQKNLSSPHSRCYYFYCTHSTNPHPTTNKITLP--LCGRDNPYGPKN 250
            + QQY     SS  +       +HS  P P+TN +  P    G+D  +G  N
Sbjct: 1005 LGQQYEHSEYSSTSN-------SHSMTPTPSTNTVVYPSYYRGKDRSHGSSN 1049

>WSB1_HUMAN (Q9Y6I7) WD repeat and SOCS box-containing protein 1 (WSB-1) (SOCS|
           box-containing WD protein SWiP-1)
          Length = 421

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 18/61 (29%), Positives = 25/61 (40%)
 Frame = +2

Query: 80  AMQGFYLINQQYHQKNLSSPHSRCYYFYCTHSTNPHPTTNKITLPLCGRDNPYGPKNNHP 259
           A  G Y    Q H+     P S+C   +  H T     ++ + LP   R N  G + N P
Sbjct: 43  APDGSYFAWSQGHRTVKLVPWSQCLQNFLLHGTKNVTNSSSLRLP---RQNSDGGQKNKP 99

Query: 260 R 262
           R
Sbjct: 100 R 100

>BRS1_ARATH (Q9M099) Serine carboxypeptidase 2 precursor (EC 3.4.16.6) (Serine|
           carboxypeptidase II) (Carboxypeptidase D) (Bri1
           suppressor 1) [Contains: Serine carboxypeptidase 2 chain
           A (Serine carboxypeptidase II chain A); Serine
           carboxypeptidase 2 chain
          Length = 465

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +2

Query: 125 NLSSPHSRCYYFYCTHSTNPHPTTNKITLPLCG 223
           N++  H R  +++ T S++P P T  + L L G
Sbjct: 52  NVNQSHGRALFYWLTESSSPSPHTKPLLLWLNG 84

>HUNB_DROMU (O46250) Protein hunchback (Fragments)|
          Length = 174

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 16/50 (32%), Positives = 21/50 (42%)
 Frame = +2

Query: 95  YLINQQYHQKNLSSPHSRCYYFYCTHSTNPHPTTNKITLPLCGRDNPYGP 244
           YL  QQ HQ++    H +     C  +  P P+ N    P  G  NP  P
Sbjct: 55  YLKQQQQHQQHQQHQHQQPMDRCCAAAMTPSPSNNDQNSP--GLPNPMQP 102


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,630,223
Number of Sequences: 219361
Number of extensions: 771371
Number of successful extensions: 1604
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1604
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 1402043640
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)