Clone Name | rbastl26a05 |
---|---|
Clone Library Name | barley_pub |
>VG12_SHV21 (P24915) Hypothetical gene 12 protein| Length = 169 Score = 29.3 bits (64), Expect = 2.4 Identities = 14/41 (34%), Positives = 20/41 (48%) Frame = -3 Query: 129 ILFVVCFRYSACSLCSCMK*WTTMYYWDSPLLVDEKYHSFY 7 I+ VC C LC + T+ W S +L E Y++FY Sbjct: 76 IVLCVCVSTLLCILCILLDICLTIRLWQSSVLCYEVYNTFY 116
>NIN_HUMAN (Q8N4C6) Ninein (hNinein)| Length = 2090 Score = 28.5 bits (62), Expect = 4.2 Identities = 12/30 (40%), Positives = 20/30 (66%) Frame = +2 Query: 65 VHHFIHEHKEQAEYLKQTTNKIEIMKAPKL 154 VHH I E K++ +YL+ T +E +KA ++ Sbjct: 1380 VHHVIEECKQENQYLEGNTQLLEKVKAHEI 1409
>PLSX_PROMM (Q7V4F7) Fatty acid/phospholipid synthesis protein plsX| Length = 448 Score = 28.5 bits (62), Expect = 4.2 Identities = 16/54 (29%), Positives = 32/54 (59%) Frame = +3 Query: 141 KPQS*HRKHVWKKKSAQV*HLSW*ACNSCSYSGNVSAILSIRSSGKICAWRGAV 302 +P++ R +W +++A V L A NS S +GNV+ + + S+G + + G++ Sbjct: 20 RPRAIRRLVIWYRRNAAVTSLVGSATNSASAAGNVAGTV-VSSAGSVVSNAGSM 72
>MYX2_CROVC (P12029) Myotoxin-2 (Myotoxin II)| Length = 43 Score = 28.5 bits (62), Expect = 4.2 Identities = 11/23 (47%), Positives = 13/23 (56%) Frame = -1 Query: 338 HKTSGSFIDSEIYCTPPSADFAR 270 HK G E CTPPS+DF + Sbjct: 5 HKKGGHCFPKEKICTPPSSDFGK 27
>KI13A_HUMAN (Q9H1H9) Kinesin-like protein KIF13A (Kinesin-like protein RBKIN)| Length = 1805 Score = 28.5 bits (62), Expect = 4.2 Identities = 15/41 (36%), Positives = 24/41 (58%) Frame = +2 Query: 77 IHEHKEQAEYLKQTTNKIEIMKAPKLT*KTCLEKKICTSLT 199 I E +E+ E L++ ++ E MKAP+L K +K+ LT Sbjct: 367 IRELREEVEKLREQLSQAEAMKAPELKEKLEESEKLIKELT 407
>TIG_MYCTU (O53189) Trigger factor (TF)| Length = 466 Score = 28.1 bits (61), Expect = 5.4 Identities = 16/47 (34%), Positives = 24/47 (51%) Frame = -2 Query: 370 DIELGSLDEMDIKQVVLSLIQKYTAPLQAQILPDDLIERIAETFPEY 230 D E + E D+K+ +L + LQ Q+ DDL ER+ T +Y Sbjct: 340 DAEARTASEKDVKRQLL--LDALADELQVQVGQDDLTERLVTTSRQY 384
>TIG_MYCBO (Q7TYJ1) Trigger factor (TF)| Length = 466 Score = 28.1 bits (61), Expect = 5.4 Identities = 16/47 (34%), Positives = 24/47 (51%) Frame = -2 Query: 370 DIELGSLDEMDIKQVVLSLIQKYTAPLQAQILPDDLIERIAETFPEY 230 D E + E D+K+ +L + LQ Q+ DDL ER+ T +Y Sbjct: 340 DAEARTASEKDVKRQLL--LDALADELQVQVGQDDLTERLVTTSRQY 384
>TDRD7_HUMAN (Q8NHU6) Tudor domain-containing protein 7 (Tudor repeat associator| with PCTAIRE 2) (Trap) Length = 1098 Score = 28.1 bits (61), Expect = 5.4 Identities = 15/36 (41%), Positives = 18/36 (50%) Frame = -2 Query: 340 DIKQVVLSLIQKYTAPLQAQILPDDLIERIAETFPE 233 D K+ V L+ KYT+ L A LP E FPE Sbjct: 340 DFKEKVADLLVKYTSGLWASALPKAFEEMYKVKFPE 375
>NFAC3_MOUSE (P97305) Nuclear factor of activated T-cells, cytoplasmic 3 (NF-ATc3)| (NFATc3) (T cell transcription factor NFAT4) (NF-AT4) (NFATx) Length = 1075 Score = 28.1 bits (61), Expect = 5.4 Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 2/48 (4%) Frame = +1 Query: 220 TAAHIQEMFLQFSQLGHLAKSALGGVQYISE--SMKEPLVLCPFHPGN 357 T H+Q M S G A S+ Q + S +P+ CP HPG+ Sbjct: 874 TPPHLQSMGYHCSNAGQTALSSPVADQITGQPSSHLQPITYCPSHPGS 921
>CAH2_ARATH (P42737) Carbonic anhydrase 2 (EC 4.2.1.1) (Carbonate dehydratase| 2) Length = 259 Score = 28.1 bits (61), Expect = 5.4 Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 4/47 (8%) Frame = -2 Query: 352 LDEMDIKQVVLSLIQKYTAPLQAQILPD----DLIERIAETFPEYEQ 224 +++ D+K V + ++K TA LQA D D +ERI E F +++ Sbjct: 18 IEKDDLKDVAAAKVKKITAELQAASSSDSKSFDPVERIKEGFVTFKK 64
>RNH2_PROMA (Q7VA11) Ribonuclease HII (EC 3.1.26.4) (RNase HII)| Length = 191 Score = 28.1 bits (61), Expect = 5.4 Identities = 11/23 (47%), Positives = 18/23 (78%) Frame = -2 Query: 298 APLQAQILPDDLIERIAETFPEY 230 A + A++ DDLI+R+AE +P+Y Sbjct: 134 ASVLAKVARDDLIKRMAEKYPQY 156
>YG4U_YEAST (P53308) Hypothetical 11.9 kDa protein in DIE2-SMI1 intergenic| region Length = 114 Score = 28.1 bits (61), Expect = 5.4 Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 2/56 (3%) Frame = -3 Query: 240 FLNMSSCCMLTNLG--VRLVQIFFSKHVFYVSFGAFIISILFVVCFRYSACSLCSC 79 FL +SS C+ T+ V FS F +FG F S L + C + +L SC Sbjct: 32 FLFISSVCLFTSSSFFADSVTCSFSTCSFSSTFGCFSSSFLSLSCLMSTLSALISC 87
>YWV1_CAEEL (Q11075) Hypothetical protein B0403.1| Length = 198 Score = 28.1 bits (61), Expect = 5.4 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = -3 Query: 177 FSKHVFYVSFGAFIISILFVVCFRYSACSL 88 F KH+ YVS AF+ + CFR++ SL Sbjct: 23 FQKHIEYVSNSAFLKCRQLLRCFRFTNVSL 52
>E2AK2_SCHPO (Q9UTE5) Eukaryotic translation initiation factor 2-alpha kinase 2| (EC 2.7.11.1) (Heme-regulated eukaryotic initiation factor eIF-2-alpha kinase) (Heme-regulated inhibitor 2) Length = 639 Score = 27.7 bits (60), Expect = 7.1 Identities = 11/35 (31%), Positives = 19/35 (54%) Frame = +1 Query: 94 TSRVSKTNNKQNRDNESPKANIENMFGKKNLHKSN 198 T + T+ K + + + +N EN+ +NLH SN Sbjct: 294 TESIISTSRKSSYSSTTESSNFENLESPRNLHDSN 328
>DDX27_HUMAN (Q96GQ7) Probable ATP-dependent RNA helicase DDX27 (EC 3.6.1.-)| (DEAD box protein 27) Length = 796 Score = 27.7 bits (60), Expect = 7.1 Identities = 13/48 (27%), Positives = 30/48 (62%) Frame = -2 Query: 355 SLDEMDIKQVVLSLIQKYTAPLQAQILPDDLIERIAETFPEYEQLLHA 212 SL D ++++ +++ AP++A+ILP D+I + + + E+ ++A Sbjct: 565 SLVGEDERKMLKEIVKAAKAPVKARILPQDVILKFRDKIEKMEKDVYA 612
>OTC_BUCBP (Q89AG1) Ornithine carbamoyltransferase (EC 2.1.3.3) (OTCase)| Length = 339 Score = 27.7 bits (60), Expect = 7.1 Identities = 15/46 (32%), Positives = 22/46 (47%) Frame = +1 Query: 1 HAIKRMIFFIHQKWGIPVIHCSPSFHTRAQRTSRVSKTNNKQNRDN 138 + + + + Q I V+HC PSFH + T + NK N DN Sbjct: 254 YQVNLKMLLLTQNKKIKVLHCLPSFHDK--NTIVGEEIINKHNLDN 297
>AT7L1_HUMAN (Q9ULK2) Ataxin-7-like protein 1 (Fragment)| Length = 864 Score = 27.7 bits (60), Expect = 7.1 Identities = 18/64 (28%), Positives = 30/64 (46%) Frame = +1 Query: 46 IPVIHCSPSFHTRAQRTSRVSKTNNKQNRDNESPKANIENMFGKKNLHKSNT*VGEHATA 225 IP + SPS +TS+ SK + R +ESP KK +S+T +++ Sbjct: 610 IPAVIPSPSHKPSKTKTSKSSKVKDLSTRSDESPS-------NKKRKPQSSTSSSSSSSS 662 Query: 226 AHIQ 237 + +Q Sbjct: 663 SSLQ 666
>SECA_PAVLU (Q01570) Preprotein translocase secA subunit| Length = 891 Score = 27.7 bits (60), Expect = 7.1 Identities = 12/37 (32%), Positives = 24/37 (64%) Frame = -2 Query: 349 DEMDIKQVVLSLIQKYTAPLQAQILPDDLIERIAETF 239 + +D+++++ L YT P + +I ++LIE I E+F Sbjct: 539 NRLDVEELIDKLKSAYTVPEKNRIGVEELIENIDESF 575
>KLOTB_HUMAN (Q86Z14) Beta klotho (BetaKlotho) (Klotho beta-like protein)| Length = 1044 Score = 27.3 bits (59), Expect = 9.3 Identities = 9/15 (60%), Positives = 12/15 (80%) Frame = -3 Query: 63 TMYYWDSPLLVDEKY 19 T+Y+WD PL + EKY Sbjct: 192 TLYHWDLPLALQEKY 206
>PDR10_ARATH (Q7PC85) Probable pleiotropic drug resistance protein 10| Length = 1418 Score = 27.3 bits (59), Expect = 9.3 Identities = 17/71 (23%), Positives = 33/71 (46%) Frame = -3 Query: 246 KHFLNMSSCCMLTNLGVRLVQIFFSKHVFYVSFGAFIISILFVVCFRYSACSLCSCMK*W 67 KH+L ++ C ++ R + HV + G +++++++ F S K W Sbjct: 632 KHYLVLALCGQMSYGLFRCIAAVTRNHVVSNTMGC--LAVMWLMTFSGYVLSRNQVHK-W 688 Query: 66 TTMYYWDSPLL 34 T YW SP++ Sbjct: 689 LTWAYWTSPMM 699
>PLSB_CAEEL (Q22949) Probable glycerol-3-phosphate acyltransferase,| mitochondrial precursor (EC 2.3.1.15) (GPAT) Length = 718 Score = 27.3 bits (59), Expect = 9.3 Identities = 13/54 (24%), Positives = 21/54 (38%) Frame = +1 Query: 10 KRMIFFIHQKWGIPVIHCSPSFHTRAQRTSRVSKTNNKQNRDNESPKANIENMF 171 +R + W IP+IH P+ + RV + +K N+ K F Sbjct: 58 RRFLADFRYSWSIPLIHHYPNVEKDVLSSKRVHRVISKLKEQNDEQKNRAVQFF 111 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 53,015,844 Number of Sequences: 219361 Number of extensions: 941830 Number of successful extensions: 2989 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 2917 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2988 length of database: 80,573,946 effective HSP length: 99 effective length of database: 58,857,207 effective search space used: 1412572968 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)